RNA–Protein interactions for RNA: ENST00000309546.7

LIME1-201, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIME1, Length 1,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-201ENST00000309546 ELMOD2Q8IZ81 293 aa16.01■□□□□ 0.15
LIME1-201ENST00000309546 YIPF7Q8N8F6 280 aa16.01■□□□□ 0.15
LIME1-201ENST00000309546 RIBC2Q9H4K1 309 aa16.01■□□□□ 0.15
LIME1-201ENST00000309546 ZNRD1Q9P1U0 126 aa16.01■□□□□ 0.15
LIME1-201ENST00000309546 SNX5Q9Y5X3 404 aa16.01■□□□□ 0.15
LIME1-201ENST00000309546 TRRAPQ9Y4A5 3859 aa16■□□□□ 0.15
LIME1-201ENST00000309546 CLPSL1A2RUU4 121 aa16■□□□□ 0.15
LIME1-201ENST00000309546 H3BSH0 61 aa16■□□□□ 0.15
LIME1-201ENST00000309546 M0R1W7 72 aa16■□□□□ 0.15
LIME1-201ENST00000309546 SYNGR1O43759 233 aa16■□□□□ 0.15
LIME1-201ENST00000309546 ATP5HO75947 161 aa16■□□□□ 0.15
LIME1-201ENST00000309546 PAHP00439 452 aa16■□□□□ 0.15
LIME1-201ENST00000309546 KRT8P05787 483 aa16■□□□□ 0.15
LIME1-201ENST00000309546 RPL15P61313 204 aaKnown RBP16■□□□□ 0.15
LIME1-201ENST00000309546 NCR3LG1Q68D85 454 aa16■□□□□ 0.15
LIME1-201ENST00000309546 BRICD5Q6PL45 260 aa16■□□□□ 0.15
LIME1-201ENST00000309546 TREML4Q6UXN2 200 aa16■□□□□ 0.15
LIME1-201ENST00000309546 ASRGL1Q7L266 308 aa16■□□□□ 0.15
LIME1-201ENST00000309546 ZNF573Q86YE8 665 aa16■□□□□ 0.15
LIME1-201ENST00000309546 POC1AQ8NBT0 407 aa16■□□□□ 0.15
LIME1-201ENST00000309546 NPRL2Q8WTW4 380 aa16■□□□□ 0.15
LIME1-201ENST00000309546 SLC22A13Q9Y226 551 aa16■□□□□ 0.15
LIME1-201ENST00000309546 V9GYS6 101 aa16■□□□□ 0.15
LIME1-201ENST00000309546 MEIOCA2RUB1 952 aa15.99■□□□□ 0.15
LIME1-201ENST00000309546 RFPL4AA6NLU0 287 aa15.99■□□□□ 0.15
LIME1-201ENST00000309546 RFPL4AL1F8VTS6 287 aa15.99■□□□□ 0.15
LIME1-201ENST00000309546 H0YAE9 185 aa15.99■□□□□ 0.15
LIME1-201ENST00000309546 J3QT63 122 aa15.99■□□□□ 0.15
LIME1-201ENST00000309546 CIB2O75838 187 aa15.99■□□□□ 0.15
LIME1-201ENST00000309546 SAA4P35542 130 aa15.99■□□□□ 0.15
LIME1-201ENST00000309546 POLR2IP36954 125 aaKnown RBP15.99■□□□□ 0.15
LIME1-201ENST00000309546 CEBPDP49716 269 aaPredicted RBP15.99■□□□□ 0.15
LIME1-201ENST00000309546 TAF9Q16594 264 aa15.99■□□□□ 0.15
LIME1-201ENST00000309546 OR10H4Q8NGA5 316 aa15.99■□□□□ 0.15
LIME1-201ENST00000309546 OR14K1Q8NGZ2 314 aa15.99■□□□□ 0.15
LIME1-201ENST00000309546 TRMT10AQ8TBZ6 339 aaKnown RBP15.99■□□□□ 0.15
LIME1-201ENST00000309546 TNFRSF14Q92956 283 aa15.99■□□□□ 0.15
LIME1-201ENST00000309546 SDSLQ96GA7 329 aa15.99■□□□□ 0.15
LIME1-201ENST00000309546 METTL8Q9H825 291 aaKnown RBP15.99■□□□□ 0.15
LIME1-201ENST00000309546 PLEKHA1Q9HB21 404 aa15.99■□□□□ 0.15
LIME1-201ENST00000309546 RASL12Q9NYN1 266 aa15.99■□□□□ 0.15
LIME1-201ENST00000309546 WARS2Q9UGM6 360 aaKnown RBP15.99■□□□□ 0.15
LIME1-201ENST00000309546 OAZ3Q9UMX2 235 aa15.99■□□□□ 0.15
LIME1-201ENST00000309546 POLDIP2Q9Y2S7 368 aa15.99■□□□□ 0.15
LIME1-201ENST00000309546 MGAM2Q2M2H8 2515 aa15.99■□□□□ 0.15
LIME1-201ENST00000309546 TRBV23-1A0A0A0MS06 115 aa15.98■□□□□ 0.15
LIME1-201ENST00000309546 A0A1B0GTI1 187 aa15.98■□□□□ 0.15
LIME1-201ENST00000309546 SAC3D1A6NKF1 404 aa15.98■□□□□ 0.15
LIME1-201ENST00000309546 SLC1A7O00341 560 aa15.98■□□□□ 0.15
LIME1-201ENST00000309546 DLGAP1O14490 977 aa15.98■□□□□ 0.15
LIME1-201ENST00000309546 WIPF1O43516 503 aa15.98■□□□□ 0.15
LIME1-201ENST00000309546 NXPH2O95156 264 aa15.98■□□□□ 0.15
LIME1-201ENST00000309546 PGA5P0DJD9 388 aa15.98■□□□□ 0.15
LIME1-201ENST00000309546 HTR1FP30939 366 aa15.98■□□□□ 0.15
LIME1-201ENST00000309546 TMEM42Q69YG0 159 aa15.98■□□□□ 0.15
LIME1-201ENST00000309546 DHRS7BQ6IAN0 325 aaPredicted RBP15.98■□□□□ 0.15
LIME1-201ENST00000309546 GDPGP1Q6ZNW5 385 aa15.98■□□□□ 0.15
LIME1-201ENST00000309546 C1orf122Q6ZSJ8 110 aa15.98■□□□□ 0.15
LIME1-201ENST00000309546 CD177Q8N6Q3 437 aa15.98■□□□□ 0.15
LIME1-201ENST00000309546 C19orf12Q9NSK7 152 aa15.98■□□□□ 0.15
LIME1-201ENST00000309546 OR14J1Q9UGF5 321 aa15.98■□□□□ 0.15
LIME1-201ENST00000309546 VPREB3Q9UKI3 123 aa15.98■□□□□ 0.15
LIME1-201ENST00000309546 RNF114Q9Y508 228 aa15.98■□□□□ 0.15
LIME1-201ENST00000309546 A0A1W2PQL4 384 aaPredicted RBP15.97■□□□□ 0.15
LIME1-201ENST00000309546 PQLC2LA1A4F0 135 aa15.97■□□□□ 0.15
LIME1-201ENST00000309546 ANGPTL7O43827 346 aa15.97■□□□□ 0.15
LIME1-201ENST00000309546 ATP6V1E1P36543 226 aa15.97■□□□□ 0.15
LIME1-201ENST00000309546 UBE2E1P51965 193 aa15.97■□□□□ 0.15
LIME1-201ENST00000309546 GABARAPL3Q9BY60 117 aa15.97■□□□□ 0.15
LIME1-201ENST00000309546 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.97■□□□□ 0.15
LIME1-201ENST00000309546 FAM230AA0A1W2PPH8 454 aa15.96■□□□□ 0.15
LIME1-201ENST00000309546 ANKRD61A6NGH8 418 aa15.96■□□□□ 0.15
LIME1-201ENST00000309546 OR2T7P0C7T2 308 aa15.96■□□□□ 0.15
LIME1-201ENST00000309546 PRDX2P32119 198 aa15.96■□□□□ 0.15
LIME1-201ENST00000309546 CATSPERDQ86XM0 798 aa15.96■□□□□ 0.15
LIME1-201ENST00000309546 ANGPTL5Q86XS5 388 aa15.96■□□□□ 0.15
LIME1-201ENST00000309546 ZNF561Q8N587 486 aa15.96■□□□□ 0.15
LIME1-201ENST00000309546 OR5D13Q8NGL4 314 aa15.96■□□□□ 0.15
LIME1-201ENST00000309546 OR2T27Q8NH04 317 aa15.96■□□□□ 0.15
LIME1-201ENST00000309546 CENPNQ96H22 339 aaPredicted RBP15.96■□□□□ 0.15
LIME1-201ENST00000309546 METTL15A6NJ78 407 aa15.95■□□□□ 0.14
LIME1-201ENST00000309546 DHRS7CA6NNS2 312 aa15.95■□□□□ 0.14
LIME1-201ENST00000309546 SYT7O43581 403 aa15.95■□□□□ 0.14
LIME1-201ENST00000309546 CCL1P22362 96 aa15.95■□□□□ 0.14
LIME1-201ENST00000309546 RPL31P62899 125 aaKnown RBP15.95■□□□□ 0.14
LIME1-201ENST00000309546 ACSM1Q08AH1 577 aa15.95■□□□□ 0.14
LIME1-201ENST00000309546 Q6ZSV7 163 aa15.95■□□□□ 0.14
LIME1-201ENST00000309546 CALHM1Q8IU99 346 aa15.95■□□□□ 0.14
LIME1-201ENST00000309546 OR4M1Q8NGD0 313 aa15.95■□□□□ 0.14
LIME1-201ENST00000309546 OR8J1Q8NGP2 316 aa15.95■□□□□ 0.14
LIME1-201ENST00000309546 LINC01006Q8NI28 216 aa15.95■□□□□ 0.14
LIME1-201ENST00000309546 NRIP2Q9BQI9 281 aa15.95■□□□□ 0.14
LIME1-201ENST00000309546 ADI1Q9BV57 179 aa15.95■□□□□ 0.14
LIME1-201ENST00000309546 SLC7A11Q9UPY5 501 aa15.95■□□□□ 0.14
LIME1-201ENST00000309546 SF3B6Q9Y3B4 125 aaKnown RBP15.95■□□□□ 0.14
LIME1-201ENST00000309546 A0A1W2PPH5 198 aa15.94■□□□□ 0.14
LIME1-201ENST00000309546 HCP5Q6MZN7 132 aa15.94■□□□□ 0.14
LIME1-201ENST00000309546 FAM220AQ7Z4H9 259 aa15.94■□□□□ 0.14
LIME1-201ENST00000309546 MKXQ8IYA7 352 aa15.94■□□□□ 0.14
LIME1-201ENST00000309546 C17orf50Q8WW18 174 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms