RNA–Protein interactions for RNA: ENST00000307522.3

CCDC8-201, Transcript of coiled-coil domain containing 8, humanhuman

APPRIS P1 BASIC

Gene CCDC8, Length 3,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8-201ENST00000307522 SLC16A7O60669 478 aa14.3□□□□□ -0.12
CCDC8-201ENST00000307522 MPIG6BO95866 241 aa14.3□□□□□ -0.12
CCDC8-201ENST00000307522 CD226Q15762 336 aa14.3□□□□□ -0.12
CCDC8-201ENST00000307522 SLC35D3Q5M8T2 416 aa14.3□□□□□ -0.12
CCDC8-201ENST00000307522 GUSBP11Q6P575 273 aa14.3□□□□□ -0.12
CCDC8-201ENST00000307522 THNSL2Q86YJ6 484 aa14.3□□□□□ -0.12
CCDC8-201ENST00000307522 NECAP1Q8NC96 275 aa14.3□□□□□ -0.12
CCDC8-201ENST00000307522 C8orf44Q96CB5 159 aa14.3□□□□□ -0.12
CCDC8-201ENST00000307522 ZNF764Q96H86 408 aaPredicted RBP14.3□□□□□ -0.12
CCDC8-201ENST00000307522 C2orf50Q96LR7 162 aa14.3□□□□□ -0.12
CCDC8-201ENST00000307522 CUTCQ9NTM9 273 aa14.3□□□□□ -0.12
CCDC8-201ENST00000307522 LOC107986453A0A1B0GWG9 222 aa14.29□□□□□ -0.12
CCDC8-201ENST00000307522 FAM221AA4D161 298 aa14.29□□□□□ -0.12
CCDC8-201ENST00000307522 TIAF1O95411 115 aa14.29□□□□□ -0.12
CCDC8-201ENST00000307522 SFT2D2O95562 160 aa14.29□□□□□ -0.12
CCDC8-201ENST00000307522 OR4A8P0C604 315 aa14.29□□□□□ -0.12
CCDC8-201ENST00000307522 GZMBP10144 247 aa14.29□□□□□ -0.12
CCDC8-201ENST00000307522 S1PR1P21453 382 aa14.29□□□□□ -0.12
CCDC8-201ENST00000307522 THBS4P35443 961 aa14.29□□□□□ -0.12
CCDC8-201ENST00000307522 GNG10P50151 68 aa14.29□□□□□ -0.12
CCDC8-201ENST00000307522 TSPO2Q5TGU0 170 aa14.29□□□□□ -0.12
CCDC8-201ENST00000307522 CYB561D1Q8N8Q1 229 aa14.29□□□□□ -0.12
CCDC8-201ENST00000307522 EXD3Q8N9H8 876 aa14.29□□□□□ -0.12
CCDC8-201ENST00000307522 POC1AQ8NBT0 407 aa14.29□□□□□ -0.12
CCDC8-201ENST00000307522 SLC38A9Q8NBW4 561 aa14.29□□□□□ -0.12
CCDC8-201ENST00000307522 AQP3Q92482 292 aa14.29□□□□□ -0.12
CCDC8-201ENST00000307522 DCHS1Q96JQ0 3298 aa14.29□□□□□ -0.12
CCDC8-201ENST00000307522 CT45A8P0DMV1 189 aa14.29□□□□□ -0.12
CCDC8-201ENST00000307522 CT45A9P0DMV2 189 aa14.29□□□□□ -0.12
CCDC8-201ENST00000307522 INSM1Q01101 510 aaPredicted RBP14.29□□□□□ -0.12
CCDC8-201ENST00000307522 SLC17A1Q14916 467 aa14.29□□□□□ -0.12
CCDC8-201ENST00000307522 CT45A2Q5DJT8 189 aa14.29□□□□□ -0.12
CCDC8-201ENST00000307522 NCR3LG1Q68D85 454 aa14.29□□□□□ -0.12
CCDC8-201ENST00000307522 HOGA1Q86XE5 327 aa14.29□□□□□ -0.12
CCDC8-201ENST00000307522 MRPL24Q96A35 216 aaKnown RBP14.29□□□□□ -0.12
CCDC8-201ENST00000307522 DUSP15Q9H1R2 295 aaPredicted RBP14.29□□□□□ -0.12
CCDC8-201ENST00000307522 PADI1Q9ULC6 663 aa14.29□□□□□ -0.12
CCDC8-201ENST00000307522 RP1L1Q8IWN7 2480 aaPredicted RBP14.29□□□□□ -0.12
CCDC8-201ENST00000307522 IGKV1D-42A0A075B6H8 117 aa14.28□□□□□ -0.12
CCDC8-201ENST00000307522 NXPH3O95157 252 aa14.28□□□□□ -0.12
CCDC8-201ENST00000307522 IL18BPO95998 194 aa14.28□□□□□ -0.12
CCDC8-201ENST00000307522 SLC35A1P78382 337 aa14.28□□□□□ -0.12
CCDC8-201ENST00000307522 ARFRP1Q13795 201 aa14.28□□□□□ -0.12
CCDC8-201ENST00000307522 HMGN3Q15651 99 aa14.28□□□□□ -0.12
CCDC8-201ENST00000307522 PCK2Q16822 640 aa14.28□□□□□ -0.12
CCDC8-201ENST00000307522 WDR25Q64LD2 544 aaPredicted RBP14.28□□□□□ -0.12
CCDC8-201ENST00000307522 CPEB2Q7Z5Q1 589 aaKnown RBP14.28□□□□□ -0.12
CCDC8-201ENST00000307522 ANGPTL5Q86XS5 388 aa14.28□□□□□ -0.12
CCDC8-201ENST00000307522 YPEL4Q96NS1 127 aa14.28□□□□□ -0.12
CCDC8-201ENST00000307522 RTBDNQ9BSG5 229 aaPredicted RBP14.28□□□□□ -0.12
CCDC8-201ENST00000307522 SLC25A31Q9H0C2 315 aa14.28□□□□□ -0.12
CCDC8-201ENST00000307522 LYRM4Q9HD34 91 aa14.28□□□□□ -0.12
CCDC8-201ENST00000307522 ZFHX2Q9C0A1 2572 aaPredicted RBP14.28□□□□□ -0.12
CCDC8-201ENST00000307522 ZFHX4Q86UP3 3567 aa14.28□□□□□ -0.12
CCDC8-201ENST00000307522 LMO7DNF2Z398 122 aa14.28□□□□□ -0.12
CCDC8-201ENST00000307522 AGR2O95994 175 aa14.28□□□□□ -0.12
CCDC8-201ENST00000307522 SLC35E2P0CK97 266 aa14.28□□□□□ -0.12
CCDC8-201ENST00000307522 NOVA1P51513 510 aaKnown RBP14.28□□□□□ -0.12
CCDC8-201ENST00000307522 NXPH1P58417 271 aa14.28□□□□□ -0.12
CCDC8-201ENST00000307522 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.28□□□□□ -0.12
CCDC8-201ENST00000307522 MRPS17Q9Y2R5 130 aaKnown RBP14.28□□□□□ -0.12
CCDC8-201ENST00000307522 KCNIP3Q9Y2W7 256 aa14.28□□□□□ -0.12
CCDC8-201ENST00000307522 PHF3Q92576 2039 aaKnown RBP14.28□□□□□ -0.12
CCDC8-201ENST00000307522 RAD51DO75771 328 aa14.28□□□□□ -0.12
CCDC8-201ENST00000307522 VSIG8P0DPA2 414 aa14.28□□□□□ -0.12
CCDC8-201ENST00000307522 CEBPEQ15744 281 aa14.28□□□□□ -0.12
CCDC8-201ENST00000307522 PRTGQ2VWP7 1150 aa14.28□□□□□ -0.12
CCDC8-201ENST00000307522 OPN3Q9H1Y3 402 aaPredicted RBP14.28□□□□□ -0.12
CCDC8-201ENST00000307522 FGF21Q9NSA1 209 aa14.28□□□□□ -0.12
CCDC8-201ENST00000307522 CLDN16Q9Y5I7 305 aa14.28□□□□□ -0.12
CCDC8-201ENST00000307522 IGHV1OR21-1A0A087WYE8 117 aa14.27□□□□□ -0.12
CCDC8-201ENST00000307522 RPL29P47914 159 aaKnown RBP14.27□□□□□ -0.12
CCDC8-201ENST00000307522 EMP2P54851 167 aa14.27□□□□□ -0.12
CCDC8-201ENST00000307522 TMEM123Q8N131 208 aa14.27□□□□□ -0.12
CCDC8-201ENST00000307522 BCORP1Q8N888 145 aa14.27□□□□□ -0.12
CCDC8-201ENST00000307522 LUZP4Q9P127 313 aa14.27□□□□□ -0.12
CCDC8-201ENST00000307522 LRP12Q9Y561 859 aa14.27□□□□□ -0.12
CCDC8-201ENST00000307522 SLC2A1P11166 492 aa14.27□□□□□ -0.13
CCDC8-201ENST00000307522 FUT3P21217 361 aa14.27□□□□□ -0.13
CCDC8-201ENST00000307522 MPZP25189 248 aa14.27□□□□□ -0.13
CCDC8-201ENST00000307522 HSD17B7P56937 341 aa14.27□□□□□ -0.13
CCDC8-201ENST00000307522 PRPS1P60891 318 aa14.27□□□□□ -0.13
CCDC8-201ENST00000307522 SSBP1Q04837 148 aaKnown RBP14.27□□□□□ -0.13
CCDC8-201ENST00000307522 TRA2AQ13595 282 aaKnown RBP eCLIP14.27□□□□□ -0.13
CCDC8-201ENST00000307522 KIAA2026Q5HYC2 2103 aa14.27□□□□□ -0.13
CCDC8-201ENST00000307522 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.27□□□□□ -0.13
CCDC8-201ENST00000307522 AADACL3Q5VUY0 350 aa14.27□□□□□ -0.13
CCDC8-201ENST00000307522 COMMD2Q86X83 199 aa14.27□□□□□ -0.13
CCDC8-201ENST00000307522 SHANK1Q9Y566 2161 aa14.26□□□□□ -0.13
CCDC8-201ENST00000307522 TMEM269A0A1B0GVZ9 245 aa14.26□□□□□ -0.13
CCDC8-201ENST00000307522 SHISA8B8ZZ34 492 aa14.26□□□□□ -0.13
CCDC8-201ENST00000307522 ARPC3O15145 178 aa14.26□□□□□ -0.13
CCDC8-201ENST00000307522 PTBP3O95758 552 aaKnown RBP14.26□□□□□ -0.13
CCDC8-201ENST00000307522 CD33P20138 364 aa14.26□□□□□ -0.13
CCDC8-201ENST00000307522 BTNL3Q6UXE8 466 aa14.26□□□□□ -0.13
CCDC8-201ENST00000307522 OR13G1Q8NGZ3 307 aa14.26□□□□□ -0.13
CCDC8-201ENST00000307522 OTOSQ8NHW6 89 aa14.26□□□□□ -0.13
CCDC8-201ENST00000307522 STT3BQ8TCJ2 826 aa14.26□□□□□ -0.13
CCDC8-201ENST00000307522 PRRX2Q99811 253 aa14.26□□□□□ -0.13
CCDC8-201ENST00000307522 NDUFAF3Q9BU61 184 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms