RNA–Protein interactions for RNA: ENST00000301732.9

ABCA3-201, Transcript of ATP binding cassette subfamily A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA3, Length 6,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-201ENST00000301732 BPIFB3P59826 476 aa11.07□□□□□ -0.64
ABCA3-201ENST00000301732 LYZP61626 148 aa11.07□□□□□ -0.64
ABCA3-201ENST00000301732 RAB1AP62820 205 aa11.07□□□□□ -0.64
ABCA3-201ENST00000301732 SHBQ15464 509 aa11.07□□□□□ -0.64
ABCA3-201ENST00000301732 ST6GALNAC3Q8NDV1 305 aa11.07□□□□□ -0.64
ABCA3-201ENST00000301732 M1APQ8TC57 530 aa11.07□□□□□ -0.64
ABCA3-201ENST00000301732 DUSP21Q9H596 190 aa11.07□□□□□ -0.64
ABCA3-201ENST00000301732 B9D1Q9UPM9 204 aa11.07□□□□□ -0.64
ABCA3-201ENST00000301732 SHISA7A6NL88 538 aa11.07□□□□□ -0.64
ABCA3-201ENST00000301732 C3AR1Q16581 482 aa11.07□□□□□ -0.64
ABCA3-201ENST00000301732 CHD2O14647 1828 aaKnown RBP11.06□□□□□ -0.64
ABCA3-201ENST00000301732 ASPDHA6ND91 283 aa11.06□□□□□ -0.64
ABCA3-201ENST00000301732 FZD6O60353 706 aa11.06□□□□□ -0.64
ABCA3-201ENST00000301732 GCSHP23434 173 aa11.06□□□□□ -0.64
ABCA3-201ENST00000301732 AWAT1Q58HT5 328 aa11.06□□□□□ -0.64
ABCA3-201ENST00000301732 FNDC7Q5VTL7 733 aa11.06□□□□□ -0.64
ABCA3-201ENST00000301732 NAT6Q93015 286 aa11.06□□□□□ -0.64
ABCA3-201ENST00000301732 MMP25Q9NPA2 562 aa11.06□□□□□ -0.64
ABCA3-201ENST00000301732 CACNG5Q9UF02 275 aa11.06□□□□□ -0.64
ABCA3-201ENST00000301732 MMP17Q9ULZ9 603 aa11.06□□□□□ -0.64
ABCA3-201ENST00000301732 TBX19O60806 448 aa11.06□□□□□ -0.64
ABCA3-201ENST00000301732 BSGP35613 385 aa11.06□□□□□ -0.64
ABCA3-201ENST00000301732 DUSP8Q13202 625 aa11.06□□□□□ -0.64
ABCA3-201ENST00000301732 OR1L3Q8NH93 324 aa11.06□□□□□ -0.64
ABCA3-201ENST00000301732 MIOXQ9UGB7 285 aa11.06□□□□□ -0.64
ABCA3-201ENST00000301732 PCOLCE2Q9UKZ9 415 aa11.06□□□□□ -0.64
ABCA3-201ENST00000301732 SPP1P10451 314 aa11.06□□□□□ -0.64
ABCA3-201ENST00000301732 KCNJ3P48549 501 aa11.06□□□□□ -0.64
ABCA3-201ENST00000301732 XAF1Q6GPH4 301 aa11.06□□□□□ -0.64
ABCA3-201ENST00000301732 WFDC3Q8IUB2 231 aa11.06□□□□□ -0.64
ABCA3-201ENST00000301732 ZADH2Q8N4Q0 377 aa11.06□□□□□ -0.64
ABCA3-201ENST00000301732 OR4D10Q8NGI6 311 aa11.06□□□□□ -0.64
ABCA3-201ENST00000301732 CD22P20273 847 aa11.06□□□□□ -0.64
ABCA3-201ENST00000301732 LPAR6P43657 344 aa11.06□□□□□ -0.64
ABCA3-201ENST00000301732 GABRA6Q16445 453 aa11.06□□□□□ -0.64
ABCA3-201ENST00000301732 CCL17Q92583 94 aa11.06□□□□□ -0.64
ABCA3-201ENST00000301732 FBXL17Q9UF56 701 aa11.06□□□□□ -0.64
ABCA3-201ENST00000301732 TOX3O15405 576 aaPredicted RBP11.06□□□□□ -0.64
ABCA3-201ENST00000301732 TMEM178AQ8NBL3 297 aa11.06□□□□□ -0.64
ABCA3-201ENST00000301732 MRGPRDQ8TDS7 321 aa11.06□□□□□ -0.64
ABCA3-201ENST00000301732 GPR87Q9BY21 358 aa11.06□□□□□ -0.64
ABCA3-201ENST00000301732 PLEKHA2Q9HB19 425 aa11.06□□□□□ -0.64
ABCA3-201ENST00000301732 IGHA1P01876 353 aa11.05□□□□□ -0.64
ABCA3-201ENST00000301732 SUCLG1P53597 346 aaKnown RBP11.05□□□□□ -0.64
ABCA3-201ENST00000301732 NHLRC2Q8NBF2 726 aa11.05□□□□□ -0.64
ABCA3-201ENST00000301732 VN1R2Q8NFZ6 395 aa11.05□□□□□ -0.64
ABCA3-201ENST00000301732 PRRX2Q99811 253 aa11.05□□□□□ -0.64
ABCA3-201ENST00000301732 EGLN1Q9GZT9 426 aa11.05□□□□□ -0.64
ABCA3-201ENST00000301732 OR2D2Q9H210 308 aa11.05□□□□□ -0.64
ABCA3-201ENST00000301732 ATG2BQ96BY7 2078 aa11.05□□□□□ -0.64
ABCA3-201ENST00000301732 C9orf170A2RU37 121 aa11.05□□□□□ -0.64
ABCA3-201ENST00000301732 MAP1LC3B2A6NCE7 125 aa11.05□□□□□ -0.64
ABCA3-201ENST00000301732 OR5B21A6NL26 309 aa11.05□□□□□ -0.64
ABCA3-201ENST00000301732 LEUTXA8MZ59 168 aa11.05□□□□□ -0.64
ABCA3-201ENST00000301732 SLC38A11Q08AI6 406 aa11.05□□□□□ -0.64
ABCA3-201ENST00000301732 TMEM183BQ1AE95 376 aa11.05□□□□□ -0.64
ABCA3-201ENST00000301732 MAP1LC3BQ9GZQ8 125 aa11.05□□□□□ -0.64
ABCA3-201ENST00000301732 MMP26Q9NRE1 261 aa11.05□□□□□ -0.64
ABCA3-201ENST00000301732 EVPLQ92817 2033 aa11.05□□□□□ -0.64
ABCA3-201ENST00000301732 SCN3AQ9NY46 2000 aa11.05□□□□□ -0.64
ABCA3-201ENST00000301732 SSX1Q16384 188 aa11.05□□□□□ -0.64
ABCA3-201ENST00000301732 TMEM241Q24JQ0 296 aa11.05□□□□□ -0.64
ABCA3-201ENST00000301732 FER1L6-AS2Q96M78 137 aa11.05□□□□□ -0.64
ABCA3-201ENST00000301732 RAB33BQ9H082 229 aa11.05□□□□□ -0.64
ABCA3-201ENST00000301732 TCRBV5S1A1TA0A578 114 aa11.05□□□□□ -0.64
ABCA3-201ENST00000301732 IGHA2P01877 340 aa11.05□□□□□ -0.64
ABCA3-201ENST00000301732 FAM87AP0C7U9 286 aa11.05□□□□□ -0.64
ABCA3-201ENST00000301732 CRYBB2P43320 205 aa11.05□□□□□ -0.64
ABCA3-201ENST00000301732 LSM11P83369 360 aaKnown RBP eCLIP11.05□□□□□ -0.64
ABCA3-201ENST00000301732 TMEM128Q5BJH2 165 aa11.05□□□□□ -0.64
ABCA3-201ENST00000301732 PCM1Q15154 2024 aa11.05□□□□□ -0.64
ABCA3-201ENST00000301732 ZNF260Q3ZCT1 412 aa11.05□□□□□ -0.64
ABCA3-201ENST00000301732 ELFN2Q5R3F8 820 aa11.05□□□□□ -0.64
ABCA3-201ENST00000301732 PTCRAQ6ISU1 281 aaPredicted RBP11.05□□□□□ -0.64
ABCA3-201ENST00000301732 ZNF774Q6NX45 483 aa11.05□□□□□ -0.64
ABCA3-201ENST00000301732 MRPS2Q9Y399 296 aaKnown RBP11.05□□□□□ -0.64
ABCA3-201ENST00000301732 HELTA6NFD8 242 aa11.04□□□□□ -0.64
ABCA3-201ENST00000301732 GSG1Q2KHT4 349 aa11.04□□□□□ -0.64
ABCA3-201ENST00000301732 SCGB1D4Q6XE38 83 aa11.04□□□□□ -0.64
ABCA3-201ENST00000301732 SMIM4Q8WVI0 70 aa11.04□□□□□ -0.64
ABCA3-201ENST00000301732 S1PR5Q9H228 398 aa11.04□□□□□ -0.64
ABCA3-201ENST00000301732 HPP00738 406 aa11.04□□□□□ -0.64
ABCA3-201ENST00000301732 MGPP08493 103 aa11.04□□□□□ -0.64
ABCA3-201ENST00000301732 WNT5AP41221 380 aa11.04□□□□□ -0.64
ABCA3-201ENST00000301732 MMP15P51511 669 aa11.04□□□□□ -0.64
ABCA3-201ENST00000301732 FOXL2P58012 376 aa11.04□□□□□ -0.64
ABCA3-201ENST00000301732 TMEM215Q68D42 235 aa11.04□□□□□ -0.64
ABCA3-201ENST00000301732 C6orf15Q6UXA7 325 aaPredicted RBP11.04□□□□□ -0.64
ABCA3-201ENST00000301732 LRRC75AQ8NAA5 344 aa11.04□□□□□ -0.64
ABCA3-201ENST00000301732 OR4D9Q8NGE8 314 aa11.04□□□□□ -0.64
ABCA3-201ENST00000301732 NTNG2Q96CW9 530 aa11.04□□□□□ -0.64
ABCA3-201ENST00000301732 BOD1Q96IK1 185 aa11.04□□□□□ -0.64
ABCA3-201ENST00000301732 PACRGQ96M98 296 aaPredicted RBP11.04□□□□□ -0.64
ABCA3-201ENST00000301732 SCPEP1Q9HB40 452 aa11.04□□□□□ -0.64
ABCA3-201ENST00000301732 YTHDF2Q9Y5A9 579 aaKnown RBP11.04□□□□□ -0.64
ABCA3-201ENST00000301732 COL14A1Q05707 1796 aaKnown RBP11.04□□□□□ -0.64
ABCA3-201ENST00000301732 LINC01565O15544 149 aa11.04□□□□□ -0.64
ABCA3-201ENST00000301732 CCDC190Q86UF4 302 aa11.04□□□□□ -0.64
ABCA3-201ENST00000301732 OR2D3Q8NGH3 330 aa11.04□□□□□ -0.64
ABCA3-201ENST00000301732 TTC9Q92623 222 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms