RNA–Protein interactions for RNA: ENST00000299130.7

BCCIP-202, Transcript of BRCA2 and CDKN1A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene BCCIP, Length 2,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCCIP-202ENST00000299130 KIAA1549Q9HCM3 1950 aa11.87□□□□□ -0.51
BCCIP-202ENST00000299130 NCKAP5O14513 1909 aa11.87□□□□□ -0.51
BCCIP-202ENST00000299130 PATE3B3GLJ2 98 aa11.86□□□□□ -0.51
BCCIP-202ENST00000299130 LRP3O75074 770 aa11.86□□□□□ -0.51
BCCIP-202ENST00000299130 MTRF1O75570 445 aaKnown RBP11.86□□□□□ -0.51
BCCIP-202ENST00000299130 IFNA2P01563 188 aa11.86□□□□□ -0.51
BCCIP-202ENST00000299130 CFIP05156 583 aa11.86□□□□□ -0.51
BCCIP-202ENST00000299130 EIF3IQ13347 325 aaKnown RBP11.86□□□□□ -0.51
BCCIP-202ENST00000299130 IL11RAQ14626 422 aa11.86□□□□□ -0.51
BCCIP-202ENST00000299130 IAH1Q2TAA2 248 aaPredicted RBP11.86□□□□□ -0.51
BCCIP-202ENST00000299130 FAM27BQ5VT28 67 aa11.86□□□□□ -0.51
BCCIP-202ENST00000299130 RPS19BP1Q86WX3 136 aaKnown RBP11.86□□□□□ -0.51
BCCIP-202ENST00000299130 CBLN2Q8IUK8 224 aa11.86□□□□□ -0.51
BCCIP-202ENST00000299130 AKR7LQ8NHP1 331 aa11.86□□□□□ -0.51
BCCIP-202ENST00000299130 FGFBP3Q8TAT2 258 aa11.86□□□□□ -0.51
BCCIP-202ENST00000299130 ARL11Q969Q4 196 aa11.86□□□□□ -0.51
BCCIP-202ENST00000299130 SPTSSAQ969W0 71 aa11.86□□□□□ -0.51
BCCIP-202ENST00000299130 MRPL24Q96A35 216 aaKnown RBP11.86□□□□□ -0.51
BCCIP-202ENST00000299130 CRLF2Q9HC73 371 aa11.86□□□□□ -0.51
BCCIP-202ENST00000299130 FAM221AA4D161 298 aa11.86□□□□□ -0.51
BCCIP-202ENST00000299130 F8W036 122 aa11.86□□□□□ -0.51
BCCIP-202ENST00000299130 SGCEO43556 437 aa11.86□□□□□ -0.51
BCCIP-202ENST00000299130 SYNGR3O43761 229 aa11.86□□□□□ -0.51
BCCIP-202ENST00000299130 VAMP5O95183 116 aa11.86□□□□□ -0.51
BCCIP-202ENST00000299130 KLK3P07288 261 aaPredicted RBP11.86□□□□□ -0.51
BCCIP-202ENST00000299130 B3GALT5-AS1P59052 145 aa11.86□□□□□ -0.51
BCCIP-202ENST00000299130 RAC1P63000 192 aa11.86□□□□□ -0.51
BCCIP-202ENST00000299130 BLOC1S1P78537 153 aa11.86□□□□□ -0.51
BCCIP-202ENST00000299130 MRPS34P82930 218 aaKnown RBP11.86□□□□□ -0.51
BCCIP-202ENST00000299130 PDCD1Q15116 288 aa11.86□□□□□ -0.51
BCCIP-202ENST00000299130 EXT1Q16394 746 aa11.86□□□□□ -0.51
BCCIP-202ENST00000299130 SP6Q3SY56 376 aa11.86□□□□□ -0.51
BCCIP-202ENST00000299130 PMS2CLQ68D20 193 aa11.86□□□□□ -0.51
BCCIP-202ENST00000299130 CLEC9AQ6UXN8 241 aa11.86□□□□□ -0.51
BCCIP-202ENST00000299130 SULF2Q8IWU5 870 aa11.86□□□□□ -0.51
BCCIP-202ENST00000299130 AGBL5Q8NDL9 886 aa11.86□□□□□ -0.51
BCCIP-202ENST00000299130 ADAMTS17Q8TE56 1095 aa11.86□□□□□ -0.51
BCCIP-202ENST00000299130 MARS2Q96GW9 593 aaKnown RBP11.86□□□□□ -0.51
BCCIP-202ENST00000299130 REEP6Q96HR9 211 aa11.86□□□□□ -0.51
BCCIP-202ENST00000299130 TREM1Q9NP99 234 aa11.86□□□□□ -0.51
BCCIP-202ENST00000299130 HPF1Q9NWY4 346 aa11.86□□□□□ -0.51
BCCIP-202ENST00000299130 LPAR3Q9UBY5 353 aa11.86□□□□□ -0.51
BCCIP-202ENST00000299130 NXT1Q9UKK6 140 aaKnown RBP11.86□□□□□ -0.51
BCCIP-202ENST00000299130 IGKV1-12A0A0C4DH73 117 aa11.85□□□□□ -0.51
BCCIP-202ENST00000299130 IGKV1D-12P01611 117 aa11.85□□□□□ -0.51
BCCIP-202ENST00000299130 B4GALT1P15291 398 aa11.85□□□□□ -0.51
BCCIP-202ENST00000299130 LPAR6P43657 344 aa11.85□□□□□ -0.51
BCCIP-202ENST00000299130 ID4P47928 161 aa11.85□□□□□ -0.51
BCCIP-202ENST00000299130 MLF1P58340 268 aa11.85□□□□□ -0.51
BCCIP-202ENST00000299130 SURF2Q15527 256 aaPredicted RBP11.85□□□□□ -0.51
BCCIP-202ENST00000299130 NSUN5P2Q63ZY6 315 aa11.85□□□□□ -0.51
BCCIP-202ENST00000299130 MAFAQ8NHW3 353 aaPredicted RBP11.85□□□□□ -0.51
BCCIP-202ENST00000299130 M1APQ8TC57 530 aa11.85□□□□□ -0.51
BCCIP-202ENST00000299130 NAT6Q93015 286 aa11.85□□□□□ -0.51
BCCIP-202ENST00000299130 HLA-CQ95604 372 aa11.85□□□□□ -0.51
BCCIP-202ENST00000299130 CNTNAP3BQ96NU0 1288 aa11.85□□□□□ -0.51
BCCIP-202ENST00000299130 ALKBH3Q96Q83 286 aaPredicted RBP11.85□□□□□ -0.51
BCCIP-202ENST00000299130 SULT4A1Q9BR01 284 aa11.85□□□□□ -0.51
BCCIP-202ENST00000299130 CNTNAP3Q9BZ76 1288 aa11.85□□□□□ -0.51
BCCIP-202ENST00000299130 MMP26Q9NRE1 261 aa11.85□□□□□ -0.51
BCCIP-202ENST00000299130 PCDHB16Q9NRJ7 776 aa11.85□□□□□ -0.51
BCCIP-202ENST00000299130 ANXA10Q9UJ72 324 aa11.85□□□□□ -0.51
BCCIP-202ENST00000299130 ARID1AO14497 2285 aa11.85□□□□□ -0.51
BCCIP-202ENST00000299130 FREM2Q5SZK8 3169 aa11.85□□□□□ -0.51
BCCIP-202ENST00000299130 ZNHIT1O43257 154 aa11.85□□□□□ -0.51
BCCIP-202ENST00000299130 RFPL3SP0C7P2 107 aa11.85□□□□□ -0.51
BCCIP-202ENST00000299130 OR5H8P0DN80 308 aa11.85□□□□□ -0.51
BCCIP-202ENST00000299130 GLI4P10075 376 aa11.85□□□□□ -0.51
BCCIP-202ENST00000299130 NME2P22392 152 aa11.85□□□□□ -0.51
BCCIP-202ENST00000299130 RBMXP38159 391 aaKnown RBP11.85□□□□□ -0.51
BCCIP-202ENST00000299130 NPBWR1P48145 328 aa11.85□□□□□ -0.51
BCCIP-202ENST00000299130 RPS18P62269 152 aaKnown RBP11.85□□□□□ -0.51
BCCIP-202ENST00000299130 SCRN3Q0VDG4 424 aa11.85□□□□□ -0.51
BCCIP-202ENST00000299130 RSU1Q15404 277 aa11.85□□□□□ -0.51
BCCIP-202ENST00000299130 PIGYQ3MUY2 71 aa11.85□□□□□ -0.51
BCCIP-202ENST00000299130 C10orf91Q5T1B1 145 aa11.85□□□□□ -0.51
BCCIP-202ENST00000299130 CDCP2Q5VXM1 449 aa11.85□□□□□ -0.51
BCCIP-202ENST00000299130 GGNBP1Q5YKI7 109 aa11.85□□□□□ -0.51
BCCIP-202ENST00000299130 CPNE2Q96FN4 548 aaPredicted RBP11.85□□□□□ -0.51
BCCIP-202ENST00000299130 C1orf123Q9NWV4 160 aa11.85□□□□□ -0.51
BCCIP-202ENST00000299130 DNAJB11Q9UBS4 358 aa11.85□□□□□ -0.51
BCCIP-202ENST00000299130 FBXO9Q9UK97 447 aaPredicted RBP11.85□□□□□ -0.51
BCCIP-202ENST00000299130 NSG1A0A0A6YYJ2 146 aa11.84□□□□□ -0.51
BCCIP-202ENST00000299130 CRYM-AS1A6NIL9 109 aa11.84□□□□□ -0.51
BCCIP-202ENST00000299130 RRP8O43159 456 aaKnown RBP11.84□□□□□ -0.51
BCCIP-202ENST00000299130 FBXO24O75426 580 aa11.84□□□□□ -0.51
BCCIP-202ENST00000299130 CBR3O75828 277 aa11.84□□□□□ -0.51
BCCIP-202ENST00000299130 LCATP04180 440 aa11.84□□□□□ -0.51
BCCIP-202ENST00000299130 MUC1P15941 1255 aaPredicted RBP11.84□□□□□ -0.51
BCCIP-202ENST00000299130 ZNF32P17041 273 aa11.84□□□□□ -0.51
BCCIP-202ENST00000299130 PJVKQ0ZLH3 352 aa11.84□□□□□ -0.51
BCCIP-202ENST00000299130 RAB35Q15286 201 aa11.84□□□□□ -0.51
BCCIP-202ENST00000299130 TSPO2Q5TGU0 170 aa11.84□□□□□ -0.51
BCCIP-202ENST00000299130 BATF2Q8N1L9 274 aa11.84□□□□□ -0.51
BCCIP-202ENST00000299130 SVBPQ8N300 66 aa11.84□□□□□ -0.51
BCCIP-202ENST00000299130 TOMM40LQ969M1 308 aa11.84□□□□□ -0.51
BCCIP-202ENST00000299130 BSCL2Q96G97 398 aaPredicted RBP11.84□□□□□ -0.51
BCCIP-202ENST00000299130 SMIM3Q9BZL3 60 aa11.84□□□□□ -0.51
BCCIP-202ENST00000299130 METTL9Q9H1A3 318 aa11.84□□□□□ -0.51
BCCIP-202ENST00000299130 TAF9BQ9HBM6 251 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms