RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 SNRPGP15A8MWD9 76 aa18.41■□□□□ 0.54
SOX17-201ENST00000297316 NRASP01111 189 aa18.41■□□□□ 0.54
SOX17-201ENST00000297316 GSTP1P09211 210 aaKnown RBP18.41■□□□□ 0.54
SOX17-201ENST00000297316 COX5BP10606 129 aa18.41■□□□□ 0.54
SOX17-201ENST00000297316 FAM209AQ5JX71 171 aa18.41■□□□□ 0.54
SOX17-201ENST00000297316 CISD2Q8N5K1 135 aaKnown RBP18.41■□□□□ 0.54
SOX17-201ENST00000297316 ANGPTL6Q8NI99 470 aa18.41■□□□□ 0.54
SOX17-201ENST00000297316 OPN3Q9H1Y3 402 aaPredicted RBP18.41■□□□□ 0.54
SOX17-201ENST00000297316 ZNF391Q9UJN7 358 aa18.41■□□□□ 0.54
SOX17-201ENST00000297316 TLN1Q9Y490 2541 aaKnown RBP18.41■□□□□ 0.54
SOX17-201ENST00000297316 LEUTXA8MZ59 168 aa18.41■□□□□ 0.54
SOX17-201ENST00000297316 TMEM225BP0DP42 221 aa18.41■□□□□ 0.54
SOX17-201ENST00000297316 WNT5AP41221 380 aa18.41■□□□□ 0.54
SOX17-201ENST00000297316 GK2Q14410 553 aaPredicted RBP18.41■□□□□ 0.54
SOX17-201ENST00000297316 RNASE10Q5GAN6 216 aaKnown RBP18.41■□□□□ 0.54
SOX17-201ENST00000297316 FAM180AQ6UWF9 173 aa18.41■□□□□ 0.54
SOX17-201ENST00000297316 C17orf107Q6ZR85 190 aa18.41■□□□□ 0.54
SOX17-201ENST00000297316 MUC20Q8N307 709 aaPredicted RBP18.41■□□□□ 0.54
SOX17-201ENST00000297316 OR6K3Q8NGY3 331 aa18.41■□□□□ 0.54
SOX17-201ENST00000297316 CHIAQ9BZP6 476 aa18.41■□□□□ 0.54
SOX17-201ENST00000297316 GPN1Q9HCN4 374 aaPredicted RBP18.41■□□□□ 0.54
SOX17-201ENST00000297316 ZNF581Q9P0T4 197 aa18.41■□□□□ 0.54
SOX17-201ENST00000297316 PIPOXQ9P0Z9 390 aa18.41■□□□□ 0.54
SOX17-201ENST00000297316 XRCC2O43543 280 aa18.4■□□□□ 0.54
SOX17-201ENST00000297316 CNN3Q15417 329 aaKnown RBP18.4■□□□□ 0.54
SOX17-201ENST00000297316 GABRA6Q16445 453 aa18.4■□□□□ 0.54
SOX17-201ENST00000297316 ATPAF1Q5TC12 328 aaPredicted RBP18.4■□□□□ 0.54
SOX17-201ENST00000297316 ZNF610Q8N9Z0 462 aa18.4■□□□□ 0.54
SOX17-201ENST00000297316 PIGCQ92535 297 aa18.4■□□□□ 0.54
SOX17-201ENST00000297316 STARD4Q96DR4 205 aa18.4■□□□□ 0.54
SOX17-201ENST00000297316 TM2D1Q9BX74 207 aa18.4■□□□□ 0.54
SOX17-201ENST00000297316 C1QTNF6Q9BXI9 259 aa18.4■□□□□ 0.54
SOX17-201ENST00000297316 PTTG3PQ9NZH4 202 aa18.4■□□□□ 0.54
SOX17-201ENST00000297316 ANAPC10Q9UM13 185 aa18.4■□□□□ 0.54
SOX17-201ENST00000297316 CHD8Q9HCK8 2581 aa18.4■□□□□ 0.54
SOX17-201ENST00000297316 NCOR2Q9Y618 2525 aa18.4■□□□□ 0.54
SOX17-201ENST00000297316 PMP2P02689 132 aa18.4■□□□□ 0.54
SOX17-201ENST00000297316 BLVRBP30043 206 aaPredicted RBP18.4■□□□□ 0.54
SOX17-201ENST00000297316 ESCO2Q56NI9 601 aa18.4■□□□□ 0.54
SOX17-201ENST00000297316 OR2A2Q6IF42 318 aa18.4■□□□□ 0.54
SOX17-201ENST00000297316 ZNF680Q8NEM1 530 aa18.4■□□□□ 0.54
SOX17-201ENST00000297316 S100A13Q99584 98 aa18.4■□□□□ 0.54
SOX17-201ENST00000297316 TMEM82A0PJX8 343 aa18.39■□□□□ 0.53
SOX17-201ENST00000297316 MBD3L4A6NDZ8 208 aaPredicted RBP18.39■□□□□ 0.53
SOX17-201ENST00000297316 MBD3L3A6NE82 208 aaPredicted RBP18.39■□□□□ 0.53
SOX17-201ENST00000297316 MBD3L5A6NJ08 208 aaPredicted RBP18.39■□□□□ 0.53
SOX17-201ENST00000297316 SLC22A5O76082 557 aa18.39■□□□□ 0.53
SOX17-201ENST00000297316 APLNRP35414 380 aa18.39■□□□□ 0.53
SOX17-201ENST00000297316 ARPC4P59998 168 aa18.39■□□□□ 0.53
SOX17-201ENST00000297316 CXADRP78310 365 aa18.39■□□□□ 0.53
SOX17-201ENST00000297316 MOB3CQ70IA8 216 aa18.39■□□□□ 0.53
SOX17-201ENST00000297316 TMED4Q7Z7H5 227 aa18.39■□□□□ 0.53
SOX17-201ENST00000297316 MBD3L2Q8NHZ7 208 aaPredicted RBP18.39■□□□□ 0.53
SOX17-201ENST00000297316 HEXA-AS1Q9H8Q6 139 aa18.39■□□□□ 0.53
SOX17-201ENST00000297316 VSIG4Q9Y279 399 aa18.39■□□□□ 0.53
SOX17-201ENST00000297316 IGKV1-12A0A0C4DH73 117 aa18.39■□□□□ 0.53
SOX17-201ENST00000297316 IGKV1D-12P01611 117 aa18.39■□□□□ 0.53
SOX17-201ENST00000297316 PRKACBP22694 351 aa18.39■□□□□ 0.53
SOX17-201ENST00000297316 RBP2P50120 134 aa18.39■□□□□ 0.53
SOX17-201ENST00000297316 MEF2DQ14814 521 aa18.39■□□□□ 0.53
SOX17-201ENST00000297316 PRR30Q53SZ7 412 aaPredicted RBP18.39■□□□□ 0.53
SOX17-201ENST00000297316 ZNF324BQ6AW86 544 aaPredicted RBP18.39■□□□□ 0.53
SOX17-201ENST00000297316 SPICQ8N5J4 248 aa18.39■□□□□ 0.53
SOX17-201ENST00000297316 SLC30A7Q8NEW0 376 aa18.39■□□□□ 0.53
SOX17-201ENST00000297316 OR56B2PQ8NGI1 322 aa18.39■□□□□ 0.53
SOX17-201ENST00000297316 FBXW5Q969U6 566 aa18.39■□□□□ 0.53
SOX17-201ENST00000297316 BORCS8Q96FH0 119 aa18.39■□□□□ 0.53
SOX17-201ENST00000297316 PECRQ9BY49 303 aa18.39■□□□□ 0.53
SOX17-201ENST00000297316 GPR160Q9UJ42 338 aa18.39■□□□□ 0.53
SOX17-201ENST00000297316 SCP2D1Q9UJQ7 156 aa18.39■□□□□ 0.53
SOX17-201ENST00000297316 PIEZO1Q92508 2521 aa18.39■□□□□ 0.53
SOX17-201ENST00000297316 DISC1C4P0D8 188 aa18.38■□□□□ 0.53
SOX17-201ENST00000297316 CRYZL1O95825 349 aa18.38■□□□□ 0.53
SOX17-201ENST00000297316 SERPINA5P05154 406 aa18.38■□□□□ 0.53
SOX17-201ENST00000297316 IDH3GP51553 393 aaPredicted RBP18.38■□□□□ 0.53
SOX17-201ENST00000297316 TGFBR3Q03167 851 aa18.38■□□□□ 0.53
SOX17-201ENST00000297316 MICBQ29980 383 aa18.38■□□□□ 0.53
SOX17-201ENST00000297316 PLCXD3Q63HM9 321 aa18.38■□□□□ 0.53
SOX17-201ENST00000297316 OR8H3Q8N146 312 aa18.38■□□□□ 0.53
SOX17-201ENST00000297316 OR2T35Q8NGX2 323 aa18.38■□□□□ 0.53
SOX17-201ENST00000297316 NANOS1Q8WY41 292 aaKnown RBP18.38■□□□□ 0.53
SOX17-201ENST00000297316 APOBEC3DQ96AK3 386 aaPredicted RBP18.38■□□□□ 0.53
SOX17-201ENST00000297316 SLC25A21Q9BQT8 299 aaPredicted RBP18.38■□□□□ 0.53
SOX17-201ENST00000297316 REPIN1Q9BWE0 567 aaKnown RBP18.38■□□□□ 0.53
SOX17-201ENST00000297316 PLSCR4Q9NRQ2 329 aa18.38■□□□□ 0.53
SOX17-201ENST00000297316 SLC2A8Q9NY64 477 aa18.38■□□□□ 0.53
SOX17-201ENST00000297316 ZNF816-ZNF321PA0A0X1KG74 233 aa18.38■□□□□ 0.53
SOX17-201ENST00000297316 AGFG2O95081 481 aa18.38■□□□□ 0.53
SOX17-201ENST00000297316 CGAP01215 116 aa18.38■□□□□ 0.53
SOX17-201ENST00000297316 GABRR1P24046 479 aa18.38■□□□□ 0.53
SOX17-201ENST00000297316 UBE2NP61088 152 aaKnown RBP18.38■□□□□ 0.53
SOX17-201ENST00000297316 LGALSLQ3ZCW2 172 aaPredicted RBP18.38■□□□□ 0.53
SOX17-201ENST00000297316 C4orf46Q504U0 113 aa18.38■□□□□ 0.53
SOX17-201ENST00000297316 RFPL4BQ6ZWI9 263 aa18.38■□□□□ 0.53
SOX17-201ENST00000297316 STEAP2Q8NFT2 490 aa18.38■□□□□ 0.53
SOX17-201ENST00000297316 MAFIPQ8WZ33 124 aa18.38■□□□□ 0.53
SOX17-201ENST00000297316 ST8SIA4Q92187 359 aa18.38■□□□□ 0.53
SOX17-201ENST00000297316 Q96M66 194 aa18.38■□□□□ 0.53
SOX17-201ENST00000297316 FGF23Q9GZV9 251 aaPredicted RBP18.38■□□□□ 0.53
SOX17-201ENST00000297316 ZNF629Q9UEG4 869 aaPredicted RBP18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms