RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 ZFP36L1Q07352 338 aaKnown RBP10.58□□□□□ -0.72
SYNGAP1-201ENST00000293748 B3GNTL1Q67FW5 361 aaPredicted RBP10.58□□□□□ -0.72
SYNGAP1-201ENST00000293748 KIRREL2Q6UWL6 708 aa10.58□□□□□ -0.72
SYNGAP1-201ENST00000293748 MUC20Q8N307 709 aaPredicted RBP10.58□□□□□ -0.72
SYNGAP1-201ENST00000293748 ORAI1Q96D31 301 aa10.58□□□□□ -0.72
SYNGAP1-201ENST00000293748 SLC35B3Q9H1N7 401 aa10.58□□□□□ -0.72
SYNGAP1-201ENST00000293748 PSENENQ9NZ42 101 aa10.58□□□□□ -0.72
SYNGAP1-201ENST00000293748 PLEKHB1Q9UF11 243 aaPredicted RBP10.58□□□□□ -0.72
SYNGAP1-201ENST00000293748 NRASP01111 189 aa10.58□□□□□ -0.72
SYNGAP1-201ENST00000293748 FABP4P15090 132 aa10.58□□□□□ -0.72
SYNGAP1-201ENST00000293748 TBXA2RP21731 343 aa10.58□□□□□ -0.72
SYNGAP1-201ENST00000293748 SLC25A1P53007 311 aa10.58□□□□□ -0.72
SYNGAP1-201ENST00000293748 SAT2Q96F10 170 aaPredicted RBP10.58□□□□□ -0.72
SYNGAP1-201ENST00000293748 ZC3HAV1LQ96H79 300 aaKnown RBP10.58□□□□□ -0.72
SYNGAP1-201ENST00000293748 VAMP8Q9BV40 100 aa10.58□□□□□ -0.72
SYNGAP1-201ENST00000293748 NUDT9Q9BW91 350 aa10.58□□□□□ -0.72
SYNGAP1-201ENST00000293748 ZNF230Q9UIE0 474 aaPredicted RBP10.58□□□□□ -0.72
SYNGAP1-201ENST00000293748 GVINP1Q7Z2Y8 2422 aa10.58□□□□□ -0.72
SYNGAP1-201ENST00000293748 PPP1CBP62140 327 aa10.58□□□□□ -0.72
SYNGAP1-201ENST00000293748 RTP5Q14D33 572 aa10.58□□□□□ -0.72
SYNGAP1-201ENST00000293748 RPL7L1Q6DKI1 246 aaKnown RBP10.58□□□□□ -0.72
SYNGAP1-201ENST00000293748 ZNF66Q6ZN08 573 aa10.58□□□□□ -0.72
SYNGAP1-201ENST00000293748 PP6455Q8WZ26 134 aa10.58□□□□□ -0.72
SYNGAP1-201ENST00000293748 PELI1Q96FA3 418 aa10.58□□□□□ -0.72
SYNGAP1-201ENST00000293748 ADGRL4Q9HBW9 690 aa10.58□□□□□ -0.72
SYNGAP1-201ENST00000293748 NINQ8N4C6 2090 aa10.58□□□□□ -0.72
SYNGAP1-201ENST00000293748 ARPC3O15145 178 aa10.57□□□□□ -0.72
SYNGAP1-201ENST00000293748 HSBP1O75506 76 aa10.57□□□□□ -0.72
SYNGAP1-201ENST00000293748 ADH4P08319 380 aa10.57□□□□□ -0.72
SYNGAP1-201ENST00000293748 ARL16Q0P5N6 197 aa10.57□□□□□ -0.72
SYNGAP1-201ENST00000293748 KIAA0040Q15053 153 aa10.57□□□□□ -0.72
SYNGAP1-201ENST00000293748 EXT1Q16394 746 aa10.57□□□□□ -0.72
SYNGAP1-201ENST00000293748 TBC1D28Q2M2D7 210 aa10.57□□□□□ -0.72
SYNGAP1-201ENST00000293748 MRM1Q6IN84 353 aaKnown RBP10.57□□□□□ -0.72
SYNGAP1-201ENST00000293748 C16orf52Q8NHV5 167 aa10.57□□□□□ -0.72
SYNGAP1-201ENST00000293748 FAM117AQ9C073 453 aa10.57□□□□□ -0.72
SYNGAP1-201ENST00000293748 MAGT1Q9H0U3 335 aa10.57□□□□□ -0.72
SYNGAP1-201ENST00000293748 ZMAT5Q9UDW3 170 aaKnown RBP10.57□□□□□ -0.72
SYNGAP1-201ENST00000293748 IGHV5-51A0A0C4DH38 117 aa10.57□□□□□ -0.72
SYNGAP1-201ENST00000293748 LINC00862A6NCI5 91 aa10.57□□□□□ -0.72
SYNGAP1-201ENST00000293748 ENSAO43768 121 aaKnown RBP10.57□□□□□ -0.72
SYNGAP1-201ENST00000293748 SMIM6P0DI80 62 aa10.57□□□□□ -0.72
SYNGAP1-201ENST00000293748 C19orf35Q6ZS72 473 aa10.57□□□□□ -0.72
SYNGAP1-201ENST00000293748 OR4S1Q8NGB4 309 aa10.57□□□□□ -0.72
SYNGAP1-201ENST00000293748 NXF2Q9GZY0 626 aaKnown RBP10.57□□□□□ -0.72
SYNGAP1-201ENST00000293748 SIGLEC7Q9Y286 467 aa10.57□□□□□ -0.72
SYNGAP1-201ENST00000293748 EXOGQ9Y2C4 368 aaKnown RBP10.57□□□□□ -0.72
SYNGAP1-201ENST00000293748 MMP24Q9Y5R2 645 aa10.57□□□□□ -0.72
SYNGAP1-201ENST00000293748 LY6G6EA0A0G2JKS1 128 aa10.57□□□□□ -0.72
SYNGAP1-201ENST00000293748 LEUTXA8MZ59 168 aa10.57□□□□□ -0.72
SYNGAP1-201ENST00000293748 HS3ST1O14792 307 aa10.57□□□□□ -0.72
SYNGAP1-201ENST00000293748 CCL4P13236 92 aa10.57□□□□□ -0.72
SYNGAP1-201ENST00000293748 RRADP55042 308 aa10.57□□□□□ -0.72
SYNGAP1-201ENST00000293748 KRTDAPP60985 99 aa10.57□□□□□ -0.72
SYNGAP1-201ENST00000293748 C19orf57Q0VDD7 668 aa10.57□□□□□ -0.72
SYNGAP1-201ENST00000293748 C1QTNF12Q5T7M4 302 aa10.57□□□□□ -0.72
SYNGAP1-201ENST00000293748 SLC38A6Q8IZM9 456 aa10.57□□□□□ -0.72
SYNGAP1-201ENST00000293748 OTOSQ8NHW6 89 aa10.57□□□□□ -0.72
SYNGAP1-201ENST00000293748 APH1AQ96BI3 265 aa10.57□□□□□ -0.72
SYNGAP1-201ENST00000293748 FAM103A1Q9BTL3 118 aaKnown RBP10.57□□□□□ -0.72
SYNGAP1-201ENST00000293748 NGBQ9NPG2 151 aa10.57□□□□□ -0.72
SYNGAP1-201ENST00000293748 OCIAD1Q9NX40 245 aa10.57□□□□□ -0.72
SYNGAP1-201ENST00000293748 RCL1Q9Y2P8 373 aaKnown RBP10.57□□□□□ -0.72
SYNGAP1-201ENST00000293748 U3KQA8 63 aa10.57□□□□□ -0.72
SYNGAP1-201ENST00000293748 hCG_1809904A0A1W2PP81 198 aa10.57□□□□□ -0.72
SYNGAP1-201ENST00000293748 A0A1W2PPE2 198 aa10.57□□□□□ -0.72
SYNGAP1-201ENST00000293748 A0A1W2PR64 198 aa10.57□□□□□ -0.72
SYNGAP1-201ENST00000293748 A0A1W2PRV1 198 aa10.57□□□□□ -0.72
SYNGAP1-201ENST00000293748 DVL1O14640 695 aa10.57□□□□□ -0.72
SYNGAP1-201ENST00000293748 PLXNA2O75051 1894 aa10.57□□□□□ -0.72
SYNGAP1-201ENST00000293748 WNT3P56703 355 aa10.57□□□□□ -0.72
SYNGAP1-201ENST00000293748 BTG2P78543 158 aa10.57□□□□□ -0.72
SYNGAP1-201ENST00000293748 EDDM3AQ14507 147 aa10.57□□□□□ -0.72
SYNGAP1-201ENST00000293748 ZNF573Q86YE8 665 aa10.57□□□□□ -0.72
SYNGAP1-201ENST00000293748 OR6S1Q8NH40 331 aa10.57□□□□□ -0.72
SYNGAP1-201ENST00000293748 MVB12AQ96EY5 273 aa10.57□□□□□ -0.72
SYNGAP1-201ENST00000293748 TMED3Q9Y3Q3 217 aa10.57□□□□□ -0.72
SYNGAP1-201ENST00000293748 G3V3Y1 287 aa10.56□□□□□ -0.72
SYNGAP1-201ENST00000293748 MPC2O95563 127 aa10.56□□□□□ -0.72
SYNGAP1-201ENST00000293748 SLC25A4P12235 298 aa10.56□□□□□ -0.72
SYNGAP1-201ENST00000293748 TMPRSS3P57727 454 aa10.56□□□□□ -0.72
SYNGAP1-201ENST00000293748 LSRQ86X29 649 aaPredicted RBP10.56□□□□□ -0.72
SYNGAP1-201ENST00000293748 CDC20BQ86Y33 519 aa10.56□□□□□ -0.72
SYNGAP1-201ENST00000293748 SPNS2Q8IVW8 549 aa10.56□□□□□ -0.72
SYNGAP1-201ENST00000293748 CA13Q8N1Q1 262 aa10.56□□□□□ -0.72
SYNGAP1-201ENST00000293748 OR2A1Q8NGT9 310 aa10.56□□□□□ -0.72
SYNGAP1-201ENST00000293748 LHFPL5Q8TAF8 219 aa10.56□□□□□ -0.72
SYNGAP1-201ENST00000293748 ZNF426Q9BUY5 554 aa10.56□□□□□ -0.72
SYNGAP1-201ENST00000293748 ARL2-SNX15V9GYD0 113 aa10.56□□□□□ -0.72
SYNGAP1-201ENST00000293748 NKX6-3A6NJ46 265 aa10.56□□□□□ -0.72
SYNGAP1-201ENST00000293748 AP4M1O00189 453 aa10.56□□□□□ -0.72
SYNGAP1-201ENST00000293748 SELEP16581 610 aa10.56□□□□□ -0.72
SYNGAP1-201ENST00000293748 PNLIPRP2P54317 469 aa10.56□□□□□ -0.72
SYNGAP1-201ENST00000293748 RPS19BP1Q86WX3 136 aaKnown RBP10.56□□□□□ -0.72
SYNGAP1-201ENST00000293748 BVESQ8NE79 360 aa10.56□□□□□ -0.72
SYNGAP1-201ENST00000293748 RDH5Q92781 318 aa10.56□□□□□ -0.72
SYNGAP1-201ENST00000293748 OXGR1Q96P68 337 aa10.56□□□□□ -0.72
SYNGAP1-201ENST00000293748 SERTM1A2A2V5 107 aa10.56□□□□□ -0.72
SYNGAP1-201ENST00000293748 H0YIG0 161 aa10.56□□□□□ -0.72
SYNGAP1-201ENST00000293748 SH2D1BO14796 132 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms