RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 ACKR4Q9NPB9 350 aa16.69■□□□□ 0.26
BRAF-201ENST00000288602 GPR160Q9UJ42 338 aa16.69■□□□□ 0.26
BRAF-201ENST00000288602 TRAV14DV4A0A0A6YYC5 116 aa16.69■□□□□ 0.26
BRAF-201ENST00000288602 TRGV5A0A0B4J1U4 118 aa16.69■□□□□ 0.26
BRAF-201ENST00000288602 ZSCAN5BA6NJL1 495 aa16.69■□□□□ 0.26
BRAF-201ENST00000288602 ZNF724A8MTY0 619 aa16.69■□□□□ 0.26
BRAF-201ENST00000288602 RPL36A-HNRNPH2H7BZ11 118 aa16.69■□□□□ 0.26
BRAF-201ENST00000288602 MSTNO14793 375 aa16.69■□□□□ 0.26
BRAF-201ENST00000288602 SFTPBP07988 381 aa16.69■□□□□ 0.26
BRAF-201ENST00000288602 PRKACBP22694 351 aa16.69■□□□□ 0.26
BRAF-201ENST00000288602 RRADP55042 308 aa16.69■□□□□ 0.26
BRAF-201ENST00000288602 RAB1AP62820 205 aa16.69■□□□□ 0.26
BRAF-201ENST00000288602 ZMYND11Q15326 602 aa16.69■□□□□ 0.26
BRAF-201ENST00000288602 OR8B8Q15620 311 aa16.69■□□□□ 0.26
BRAF-201ENST00000288602 CALHM1Q8IU99 346 aa16.69■□□□□ 0.26
BRAF-201ENST00000288602 FDCSPQ8NFU4 85 aa16.69■□□□□ 0.26
BRAF-201ENST00000288602 OR5M8Q8NGP6 311 aa16.69■□□□□ 0.26
BRAF-201ENST00000288602 OR13G1Q8NGZ3 307 aa16.69■□□□□ 0.26
BRAF-201ENST00000288602 ANGPTL6Q8NI99 470 aa16.69■□□□□ 0.26
BRAF-201ENST00000288602 WDYHV1Q96HA8 205 aa16.69■□□□□ 0.26
BRAF-201ENST00000288602 PDCD10Q9BUL8 212 aa16.69■□□□□ 0.26
BRAF-201ENST00000288602 FAM117AQ9C073 453 aa16.69■□□□□ 0.26
BRAF-201ENST00000288602 C5orf66Q9H5L9 145 aa16.69■□□□□ 0.26
BRAF-201ENST00000288602 FAM86C1Q9NVL1 165 aa16.69■□□□□ 0.26
BRAF-201ENST00000288602 EHFQ9NZC4 300 aa16.69■□□□□ 0.26
BRAF-201ENST00000288602 ZNF629Q9UEG4 869 aaPredicted RBP16.69■□□□□ 0.26
BRAF-201ENST00000288602 GEMIN2O14893 280 aaKnown RBP16.68■□□□□ 0.26
BRAF-201ENST00000288602 NGFP01138 241 aa16.68■□□□□ 0.26
BRAF-201ENST00000288602 GK2Q14410 553 aaPredicted RBP16.68■□□□□ 0.26
BRAF-201ENST00000288602 NRN1LQ496H8 165 aa16.68■□□□□ 0.26
BRAF-201ENST00000288602 HIKESHIQ53FT3 197 aa16.68■□□□□ 0.26
BRAF-201ENST00000288602 VAX1Q5SQQ9 334 aa16.68■□□□□ 0.26
BRAF-201ENST00000288602 LHFPL2Q6ZUX7 228 aa16.68■□□□□ 0.26
BRAF-201ENST00000288602 PRDM14Q9GZV8 571 aa16.68■□□□□ 0.26
BRAF-201ENST00000288602 OR51B6Q9H340 312 aa16.68■□□□□ 0.26
BRAF-201ENST00000288602 RGCCQ9H4X1 137 aa16.68■□□□□ 0.26
BRAF-201ENST00000288602 ASCL3Q9NQ33 180 aa16.68■□□□□ 0.26
BRAF-201ENST00000288602 KCNN3Q9UGI6 736 aa16.68■□□□□ 0.26
BRAF-201ENST00000288602 DSPP15924 2871 aaKnown RBP16.68■□□□□ 0.26
BRAF-201ENST00000288602 FIGNL2A6NMB9 653 aa16.68■□□□□ 0.26
BRAF-201ENST00000288602 XRCC2O43543 280 aa16.68■□□□□ 0.26
BRAF-201ENST00000288602 RNPS1Q15287 305 aaKnown RBP16.68■□□□□ 0.26
BRAF-201ENST00000288602 ARL6Q9H0F7 186 aa16.68■□□□□ 0.26
BRAF-201ENST00000288602 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.68■□□□□ 0.26
BRAF-201ENST00000288602 ZNF816-ZNF321PA0A0X1KG74 233 aa16.67■□□□□ 0.26
BRAF-201ENST00000288602 SERPINE3A8MV23 424 aa16.67■□□□□ 0.26
BRAF-201ENST00000288602 ACTL6AO96019 429 aa16.67■□□□□ 0.26
BRAF-201ENST00000288602 IL2RAP01589 272 aa16.67■□□□□ 0.26
BRAF-201ENST00000288602 TNFSF10P50591 281 aa16.67■□□□□ 0.26
BRAF-201ENST00000288602 TMUB2Q71RG4 321 aa16.67■□□□□ 0.26
BRAF-201ENST00000288602 OR56B2PQ8NGI1 322 aa16.67■□□□□ 0.26
BRAF-201ENST00000288602 MITD1Q8WV92 249 aa16.67■□□□□ 0.26
BRAF-201ENST00000288602 SLC7A11Q9UPY5 501 aa16.67■□□□□ 0.26
BRAF-201ENST00000288602 RIF1Q5UIP0 2472 aaKnown RBP16.67■□□□□ 0.26
BRAF-201ENST00000288602 MED12LQ86YW9 2145 aa16.67■□□□□ 0.26
BRAF-201ENST00000288602 FAM221AA4D161 298 aa16.67■□□□□ 0.26
BRAF-201ENST00000288602 ZNF205O95201 554 aa16.67■□□□□ 0.26
BRAF-201ENST00000288602 IFNA7P01567 189 aa16.67■□□□□ 0.26
BRAF-201ENST00000288602 AADACL3Q5VUY0 350 aa16.67■□□□□ 0.26
BRAF-201ENST00000288602 RPUSD3Q6P087 351 aaKnown RBP16.67■□□□□ 0.26
BRAF-201ENST00000288602 COLCA1Q6ZS62 124 aa16.67■□□□□ 0.26
BRAF-201ENST00000288602 ARRDC1Q8N5I2 433 aa16.67■□□□□ 0.26
BRAF-201ENST00000288602 OR51F2Q8NH61 342 aa16.67■□□□□ 0.26
BRAF-201ENST00000288602 EMG1Q92979 244 aaKnown RBP16.67■□□□□ 0.26
BRAF-201ENST00000288602 PHB2Q99623 299 aa16.67■□□□□ 0.26
BRAF-201ENST00000288602 ZNF391Q9UJN7 358 aa16.67■□□□□ 0.26
BRAF-201ENST00000288602 GPR132Q9UNW8 380 aa16.67■□□□□ 0.26
BRAF-201ENST00000288602 ZNF292O60281 2723 aa16.66■□□□□ 0.26
BRAF-201ENST00000288602 S100A11P31949 105 aa16.66■□□□□ 0.26
BRAF-201ENST00000288602 CBX5P45973 191 aa16.66■□□□□ 0.26
BRAF-201ENST00000288602 FUT6P51993 359 aa16.66■□□□□ 0.26
BRAF-201ENST00000288602 PDZK1IP1Q13113 114 aa16.66■□□□□ 0.26
BRAF-201ENST00000288602 CHRFAM7AQ494W8 412 aa16.66■□□□□ 0.26
BRAF-201ENST00000288602 FBXL14Q8N1E6 418 aa16.66■□□□□ 0.26
BRAF-201ENST00000288602 BHLHE23Q8NDY6 225 aa16.66■□□□□ 0.26
BRAF-201ENST00000288602 SPSB4Q96A44 273 aa16.66■□□□□ 0.26
BRAF-201ENST00000288602 TMEM230Q96A57 120 aa16.66■□□□□ 0.26
BRAF-201ENST00000288602 PAPOLGQ9BWT3 736 aaKnown RBP16.66■□□□□ 0.26
BRAF-201ENST00000288602 UBQLN2Q9UHD9 624 aa16.66■□□□□ 0.26
BRAF-201ENST00000288602 AK3Q9UIJ7 227 aa16.66■□□□□ 0.26
BRAF-201ENST00000288602 ZFHX2Q9C0A1 2572 aaPredicted RBP16.66■□□□□ 0.26
BRAF-201ENST00000288602 OR5H14A6NHG9 310 aa16.65■□□□□ 0.26
BRAF-201ENST00000288602 HMSDA8MTL9 139 aa16.65■□□□□ 0.26
BRAF-201ENST00000288602 GLRA1P23415 457 aa16.65■□□□□ 0.26
BRAF-201ENST00000288602 OPRM1P35372 400 aa16.65■□□□□ 0.26
BRAF-201ENST00000288602 ATP1B3P54709 279 aa16.65■□□□□ 0.26
BRAF-201ENST00000288602 SLC9A3R2Q15599 337 aa16.65■□□□□ 0.26
BRAF-201ENST00000288602 CCDC28AQ8IWP9 274 aa16.65■□□□□ 0.26
BRAF-201ENST00000288602 TMEM178AQ8NBL3 297 aa16.65■□□□□ 0.26
BRAF-201ENST00000288602 OR5AP2Q8NGF4 316 aa16.65■□□□□ 0.26
BRAF-201ENST00000288602 SULT4A1Q9BR01 284 aa16.65■□□□□ 0.26
BRAF-201ENST00000288602 STARD10Q9Y365 291 aa16.65■□□□□ 0.26
BRAF-201ENST00000288602 TNRC6AQ8NDV7 1962 aaKnown RBP16.65■□□□□ 0.26
BRAF-201ENST00000288602 SLC22A20A6NK97 555 aa16.65■□□□□ 0.26
BRAF-201ENST00000288602 EEF1E1-BLOC1S5C9J1V9 151 aa16.65■□□□□ 0.26
BRAF-201ENST00000288602 NPBWR2P48146 333 aa16.65■□□□□ 0.26
BRAF-201ENST00000288602 SOX8P57073 446 aa16.65■□□□□ 0.26
BRAF-201ENST00000288602 ACTBL2Q562R1 376 aa16.65■□□□□ 0.26
BRAF-201ENST00000288602 SLC38A6Q8IZM9 456 aa16.65■□□□□ 0.26
BRAF-201ENST00000288602 ZSCAN4Q8NAM6 433 aaPredicted RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms