RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 IGHA2P01877 340 aa16.44■□□□□ 0.22
PCDH1-201ENST00000287008 RPS2P15880 293 aaKnown RBP16.44■□□□□ 0.22
PCDH1-201ENST00000287008 ETFDHQ16134 617 aa16.44■□□□□ 0.22
PCDH1-201ENST00000287008 TMUB2Q71RG4 321 aa16.44■□□□□ 0.22
PCDH1-201ENST00000287008 CLEC18CQ8NCF0 446 aa16.44■□□□□ 0.22
PCDH1-201ENST00000287008 ZNF75AQ96N20 296 aa16.44■□□□□ 0.22
PCDH1-201ENST00000287008 CYSLTR2Q9NS75 346 aa16.44■□□□□ 0.22
PCDH1-201ENST00000287008 MED9Q9NWA0 146 aa16.44■□□□□ 0.22
PCDH1-201ENST00000287008 PSENENQ9NZ42 101 aa16.44■□□□□ 0.22
PCDH1-201ENST00000287008 MT-ND4LP03901 98 aa16.43■□□□□ 0.22
PCDH1-201ENST00000287008 C20orf196Q8IYI0 205 aa16.43■□□□□ 0.22
PCDH1-201ENST00000287008 SLC38A6Q8IZM9 456 aa16.43■□□□□ 0.22
PCDH1-201ENST00000287008 PTP4A1Q93096 173 aa16.43■□□□□ 0.22
PCDH1-201ENST00000287008 LHX4Q969G2 390 aa16.43■□□□□ 0.22
PCDH1-201ENST00000287008 ERGIC1Q969X5 290 aa16.43■□□□□ 0.22
PCDH1-201ENST00000287008 RGPD4Q7Z3J3 1758 aa16.43■□□□□ 0.22
PCDH1-201ENST00000287008 SNRPGP15A8MWD9 76 aa16.43■□□□□ 0.22
PCDH1-201ENST00000287008 GNG10P50151 68 aa16.43■□□□□ 0.22
PCDH1-201ENST00000287008 BTNL3Q6UXE8 466 aa16.43■□□□□ 0.22
PCDH1-201ENST00000287008 LYG2Q86SG7 212 aa16.43■□□□□ 0.22
PCDH1-201ENST00000287008 OR8D4Q8NGM9 314 aa16.43■□□□□ 0.22
PCDH1-201ENST00000287008 SAT2Q96F10 170 aaPredicted RBP16.43■□□□□ 0.22
PCDH1-201ENST00000287008 ARHGAP5-AS1Q96IT6 56 aa16.43■□□□□ 0.22
PCDH1-201ENST00000287008 TMEM56Q96MV1 263 aa16.43■□□□□ 0.22
PCDH1-201ENST00000287008 HES4Q9HCC6 221 aa16.43■□□□□ 0.22
PCDH1-201ENST00000287008 GNG13Q9P2W3 67 aa16.43■□□□□ 0.22
PCDH1-201ENST00000287008 CCL27Q9Y4X3 112 aa16.43■□□□□ 0.22
PCDH1-201ENST00000287008 HIST1H1DP16402 221 aaKnown RBP16.43■□□□□ 0.22
PCDH1-201ENST00000287008 COX7A1P24310 79 aa16.43■□□□□ 0.22
PCDH1-201ENST00000287008 HOXD11P31277 338 aaPredicted RBP16.43■□□□□ 0.22
PCDH1-201ENST00000287008 CD96P40200 585 aa16.43■□□□□ 0.22
PCDH1-201ENST00000287008 TMEM128Q5BJH2 165 aa16.43■□□□□ 0.22
PCDH1-201ENST00000287008 TMEM229BQ8NBD8 167 aa16.43■□□□□ 0.22
PCDH1-201ENST00000287008 TMEM52Q8NDY8 209 aa16.43■□□□□ 0.22
PCDH1-201ENST00000287008 OR10AD1Q8NGE0 317 aa16.43■□□□□ 0.22
PCDH1-201ENST00000287008 NDFIP1Q9BT67 221 aa16.43■□□□□ 0.22
PCDH1-201ENST00000287008 FLVCR2Q9UPI3 526 aa16.43■□□□□ 0.22
PCDH1-201ENST00000287008 BOLA1Q9Y3E2 137 aa16.43■□□□□ 0.22
PCDH1-201ENST00000287008 A0A1B0GTH9 108 aa16.43■□□□□ 0.22
PCDH1-201ENST00000287008 AKR7A2O43488 359 aa16.43■□□□□ 0.22
PCDH1-201ENST00000287008 AQP8O94778 261 aa16.43■□□□□ 0.22
PCDH1-201ENST00000287008 CRYZL1O95825 349 aa16.43■□□□□ 0.22
PCDH1-201ENST00000287008 LALBAP00709 142 aa16.43■□□□□ 0.22
PCDH1-201ENST00000287008 GALP22466 123 aa16.43■□□□□ 0.22
PCDH1-201ENST00000287008 APH1BQ8WW43 257 aa16.43■□□□□ 0.22
PCDH1-201ENST00000287008 UCN2Q96RP3 112 aa16.43■□□□□ 0.22
PCDH1-201ENST00000287008 DDA1Q9BW61 102 aa16.43■□□□□ 0.22
PCDH1-201ENST00000287008 PARP12Q9H0J9 701 aaKnown RBP16.43■□□□□ 0.22
PCDH1-201ENST00000287008 OR6C3Q9NZP0 311 aa16.43■□□□□ 0.22
PCDH1-201ENST00000287008 ERRFI1Q9UJM3 462 aaPredicted RBP16.43■□□□□ 0.22
PCDH1-201ENST00000287008 GUCA2AQ02747 115 aa16.42■□□□□ 0.22
PCDH1-201ENST00000287008 ACOT6Q3I5F7 207 aaPredicted RBP16.42■□□□□ 0.22
PCDH1-201ENST00000287008 TMEM182Q6ZP80 229 aaPredicted RBP16.42■□□□□ 0.22
PCDH1-201ENST00000287008 AKR1E2Q96JD6 320 aa16.42■□□□□ 0.22
PCDH1-201ENST00000287008 AK3Q9UIJ7 227 aa16.42■□□□□ 0.22
PCDH1-201ENST00000287008 Q6ZNX1 250 aa16.42■□□□□ 0.22
PCDH1-201ENST00000287008 TMEM104Q8NE00 496 aa16.42■□□□□ 0.22
PCDH1-201ENST00000287008 RAB33BQ9H082 229 aa16.42■□□□□ 0.22
PCDH1-201ENST00000287008 SAP30LQ9HAJ7 183 aa16.42■□□□□ 0.22
PCDH1-201ENST00000287008 A0A1B0GUH1 482 aa16.42■□□□□ 0.22
PCDH1-201ENST00000287008 ZNF724A8MTY0 619 aa16.42■□□□□ 0.22
PCDH1-201ENST00000287008 COX5AP20674 150 aa16.42■□□□□ 0.22
PCDH1-201ENST00000287008 RAB7AP51149 207 aa16.42■□□□□ 0.22
PCDH1-201ENST00000287008 PRRX1P54821 245 aa16.42■□□□□ 0.22
PCDH1-201ENST00000287008 LCN15Q6UWW0 184 aa16.42■□□□□ 0.22
PCDH1-201ENST00000287008 ACTR3CQ9C0K3 210 aaPredicted RBP16.42■□□□□ 0.22
PCDH1-201ENST00000287008 RYDENQ9NUL5 291 aaKnown RBP16.42■□□□□ 0.22
PCDH1-201ENST00000287008 LY75O60449 1722 aa16.42■□□□□ 0.22
PCDH1-201ENST00000287008 DVL1O14640 695 aa16.42■□□□□ 0.22
PCDH1-201ENST00000287008 CEACAM6P40199 344 aa16.42■□□□□ 0.22
PCDH1-201ENST00000287008 DVL1P1P54792 670 aaPredicted RBP16.42■□□□□ 0.22
PCDH1-201ENST00000287008 OR52N4Q8NGI2 321 aa16.42■□□□□ 0.22
PCDH1-201ENST00000287008 FBXW5Q969U6 566 aa16.42■□□□□ 0.22
PCDH1-201ENST00000287008 CMTM3Q96MX0 182 aa16.42■□□□□ 0.22
PCDH1-201ENST00000287008 ICAM5Q9UMF0 924 aa16.42■□□□□ 0.22
PCDH1-201ENST00000287008 PSG11Q9UQ72 335 aa16.42■□□□□ 0.22
PCDH1-201ENST00000287008 NKX2-8O15522 239 aa16.41■□□□□ 0.22
PCDH1-201ENST00000287008 MDH2P40926 338 aaKnown RBP16.41■□□□□ 0.22
PCDH1-201ENST00000287008 MMP15P51511 669 aa16.41■□□□□ 0.22
PCDH1-201ENST00000287008 FBXW9Q5XUX1 488 aa16.41■□□□□ 0.22
PCDH1-201ENST00000287008 SLC7A5P1Q8MH63 180 aa16.41■□□□□ 0.22
PCDH1-201ENST00000287008 C17orf47Q8NEP4 570 aa16.41■□□□□ 0.22
PCDH1-201ENST00000287008 TXNL1O43396 289 aa16.41■□□□□ 0.22
PCDH1-201ENST00000287008 MBP02144 154 aa16.41■□□□□ 0.22
PCDH1-201ENST00000287008 CST2P09228 141 aa16.41■□□□□ 0.22
PCDH1-201ENST00000287008 ACSM4P0C7M7 580 aa16.41■□□□□ 0.22
PCDH1-201ENST00000287008 FGF5P12034 268 aa16.41■□□□□ 0.22
PCDH1-201ENST00000287008 SOX7Q9BT81 388 aa16.41■□□□□ 0.22
PCDH1-201ENST00000287008 PLXNB2O15031 1838 aa16.41■□□□□ 0.22
PCDH1-201ENST00000287008 SULT1A3P0DMM9 295 aa16.41■□□□□ 0.22
PCDH1-201ENST00000287008 SULT1A4P0DMN0 295 aa16.41■□□□□ 0.22
PCDH1-201ENST00000287008 SSTP61278 116 aa16.41■□□□□ 0.22
PCDH1-201ENST00000287008 ZNF441Q8N8Z8 693 aa16.41■□□□□ 0.22
PCDH1-201ENST00000287008 KDF1Q8NAX2 398 aaPredicted RBP16.41■□□□□ 0.22
PCDH1-201ENST00000287008 OR5H6Q8NGV6 325 aa16.41■□□□□ 0.22
PCDH1-201ENST00000287008 OR2T6Q8NHC8 308 aa16.41■□□□□ 0.22
PCDH1-201ENST00000287008 SCARB1Q8WTV0 552 aa16.41■□□□□ 0.22
PCDH1-201ENST00000287008 MARC2Q969Z3 335 aa16.41■□□□□ 0.22
PCDH1-201ENST00000287008 GMPPAQ96IJ6 420 aaPredicted RBP16.41■□□□□ 0.22
PCDH1-201ENST00000287008 EXOGQ9Y2C4 368 aaKnown RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms