RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 REPIN1Q9BWE0 567 aaKnown RBP18.06■□□□□ 0.48
YBX3-202ENST00000279550 PLSCR4Q9NRQ2 329 aa18.06■□□□□ 0.48
YBX3-202ENST00000279550 PTTG3PQ9NZH4 202 aa18.06■□□□□ 0.48
YBX3-202ENST00000279550 TPRP12270 2363 aaKnown RBP18.06■□□□□ 0.48
YBX3-202ENST00000279550 CNOT4O95628 575 aaKnown RBP18.06■□□□□ 0.48
YBX3-202ENST00000279550 ERP29P30040 261 aaKnown RBP18.06■□□□□ 0.48
YBX3-202ENST00000279550 RBP2P50120 134 aa18.06■□□□□ 0.48
YBX3-202ENST00000279550 CDK10Q15131 360 aa18.06■□□□□ 0.48
YBX3-202ENST00000279550 RNASE10Q5GAN6 216 aaKnown RBP18.06■□□□□ 0.48
YBX3-202ENST00000279550 LHFPL2Q6ZUX7 228 aa18.06■□□□□ 0.48
YBX3-202ENST00000279550 STARD4Q96DR4 205 aa18.06■□□□□ 0.48
YBX3-202ENST00000279550 CNTNAP3BQ96NU0 1288 aa18.06■□□□□ 0.48
YBX3-202ENST00000279550 PECRQ9BY49 303 aa18.06■□□□□ 0.48
YBX3-202ENST00000279550 CNTNAP3Q9BZ76 1288 aa18.06■□□□□ 0.48
YBX3-202ENST00000279550 GPR160Q9UJ42 338 aa18.06■□□□□ 0.48
YBX3-202ENST00000279550 IGKV1-12A0A0C4DH73 117 aa18.05■□□□□ 0.48
YBX3-202ENST00000279550 ZNF850A8MQ14 1090 aa18.05■□□□□ 0.48
YBX3-202ENST00000279550 SNRPGP15A8MWD9 76 aa18.05■□□□□ 0.48
YBX3-202ENST00000279550 HTR3BO95264 441 aa18.05■□□□□ 0.48
YBX3-202ENST00000279550 IGKV1D-12P01611 117 aa18.05■□□□□ 0.48
YBX3-202ENST00000279550 GLI4P10075 376 aa18.05■□□□□ 0.48
YBX3-202ENST00000279550 BLVRBP30043 206 aaPredicted RBP18.05■□□□□ 0.48
YBX3-202ENST00000279550 CEACAM8P31997 349 aaPredicted RBP18.05■□□□□ 0.48
YBX3-202ENST00000279550 WNT5AP41221 380 aa18.05■□□□□ 0.48
YBX3-202ENST00000279550 MEF2DQ14814 521 aa18.05■□□□□ 0.48
YBX3-202ENST00000279550 PNLIPRP3Q17RR3 467 aa18.05■□□□□ 0.48
YBX3-202ENST00000279550 LAMTOR1Q6IAA8 161 aa18.05■□□□□ 0.48
YBX3-202ENST00000279550 ASCL4Q6XD76 172 aa18.05■□□□□ 0.48
YBX3-202ENST00000279550 Q6ZT83 130 aa18.05■□□□□ 0.48
YBX3-202ENST00000279550 NLRC3Q7RTR2 1065 aa18.05■□□□□ 0.48
YBX3-202ENST00000279550 STEAP2Q8NFT2 490 aa18.05■□□□□ 0.48
YBX3-202ENST00000279550 ZFAND1Q8TCF1 268 aa18.05■□□□□ 0.48
YBX3-202ENST00000279550 APOBEC3DQ96AK3 386 aaPredicted RBP18.05■□□□□ 0.48
YBX3-202ENST00000279550 MRGPRFQ96AM1 343 aa18.05■□□□□ 0.48
YBX3-202ENST00000279550 Q96M66 194 aa18.05■□□□□ 0.48
YBX3-202ENST00000279550 ZNF75AQ96N20 296 aa18.05■□□□□ 0.48
YBX3-202ENST00000279550 TRAF4Q9BUZ4 470 aaPredicted RBP18.05■□□□□ 0.48
YBX3-202ENST00000279550 FGF23Q9GZV9 251 aaPredicted RBP18.05■□□□□ 0.48
YBX3-202ENST00000279550 METTL9Q9H1A3 318 aa18.05■□□□□ 0.48
YBX3-202ENST00000279550 GPN1Q9HCN4 374 aaPredicted RBP18.05■□□□□ 0.48
YBX3-202ENST00000279550 DLL4Q9NR61 685 aa18.05■□□□□ 0.48
YBX3-202ENST00000279550 ZNF581Q9P0T4 197 aa18.05■□□□□ 0.48
YBX3-202ENST00000279550 KCNN3Q9UGI6 736 aa18.05■□□□□ 0.48
YBX3-202ENST00000279550 NPTNQ9Y639 398 aa18.05■□□□□ 0.48
YBX3-202ENST00000279550 DISC1C4P0D8 188 aa18.04■□□□□ 0.48
YBX3-202ENST00000279550 CGAP01215 116 aa18.04■□□□□ 0.48
YBX3-202ENST00000279550 NAT1P18440 290 aa18.04■□□□□ 0.48
YBX3-202ENST00000279550 IGHV1-2P23083 117 aa18.04■□□□□ 0.48
YBX3-202ENST00000279550 HRH1P35367 487 aa18.04■□□□□ 0.48
YBX3-202ENST00000279550 PLP2Q04941 152 aa18.04■□□□□ 0.48
YBX3-202ENST00000279550 FAM189A2Q15884 450 aa18.04■□□□□ 0.48
YBX3-202ENST00000279550 SCGB2B2Q4G0G5 96 aa18.04■□□□□ 0.48
YBX3-202ENST00000279550 ST6GALNAC3Q8NDV1 305 aa18.04■□□□□ 0.48
YBX3-202ENST00000279550 ST8SIA4Q92187 359 aa18.04■□□□□ 0.48
YBX3-202ENST00000279550 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP18.04■□□□□ 0.48
YBX3-202ENST00000279550 CA10Q9NS85 328 aa18.04■□□□□ 0.48
YBX3-202ENST00000279550 CREBL2O60519 120 aaPredicted RBP18.03■□□□□ 0.48
YBX3-202ENST00000279550 MPZP25189 248 aa18.03■□□□□ 0.48
YBX3-202ENST00000279550 FUT6P51993 359 aa18.03■□□□□ 0.48
YBX3-202ENST00000279550 ATPAF1Q5TC12 328 aaPredicted RBP18.03■□□□□ 0.48
YBX3-202ENST00000279550 ZBTB37Q5TC79 503 aa18.03■□□□□ 0.48
YBX3-202ENST00000279550 ZNF436Q9C0F3 470 aaPredicted RBP18.03■□□□□ 0.48
YBX3-202ENST00000279550 MGAT4CQ9UBM8 478 aa18.03■□□□□ 0.48
YBX3-202ENST00000279550 SH3BGRL2Q9UJC5 107 aa18.03■□□□□ 0.48
YBX3-202ENST00000279550 PROCRQ9UNN8 238 aa18.03■□□□□ 0.48
YBX3-202ENST00000279550 SLC7A11Q9UPY5 501 aa18.03■□□□□ 0.48
YBX3-202ENST00000279550 SPTA1P02549 2419 aa18.03■□□□□ 0.48
YBX3-202ENST00000279550 TMEM82A0PJX8 343 aa18.03■□□□□ 0.48
YBX3-202ENST00000279550 PMP2P02689 132 aa18.03■□□□□ 0.48
YBX3-202ENST00000279550 CPT2P23786 658 aa18.03■□□□□ 0.48
YBX3-202ENST00000279550 ATP1B3P54709 279 aa18.03■□□□□ 0.48
YBX3-202ENST00000279550 RSU1Q15404 277 aa18.03■□□□□ 0.48
YBX3-202ENST00000279550 MICBQ29980 383 aa18.03■□□□□ 0.48
YBX3-202ENST00000279550 MRPL21Q7Z2W9 205 aaKnown RBP18.03■□□□□ 0.48
YBX3-202ENST00000279550 DPPA2Q7Z7J5 298 aa18.03■□□□□ 0.48
YBX3-202ENST00000279550 MYPOPQ86VE0 399 aaPredicted RBP18.03■□□□□ 0.48
YBX3-202ENST00000279550 OR11H4Q8NGC9 324 aa18.03■□□□□ 0.48
YBX3-202ENST00000279550 FBXW5Q969U6 566 aa18.03■□□□□ 0.48
YBX3-202ENST00000279550 OCSTAMPQ9BR26 566 aa18.03■□□□□ 0.48
YBX3-202ENST00000279550 TMEM246Q9BRR3 403 aa18.03■□□□□ 0.48
YBX3-202ENST00000279550 SLC2A8Q9NY64 477 aa18.03■□□□□ 0.48
YBX3-202ENST00000279550 SCP2D1Q9UJQ7 156 aa18.03■□□□□ 0.48
YBX3-202ENST00000279550 ATRXP46100 2492 aa18.03■□□□□ 0.48
YBX3-202ENST00000279550 A0A1W2PR80 420 aa18.02■□□□□ 0.48
YBX3-202ENST00000279550 AKR7A2O43488 359 aa18.02■□□□□ 0.48
YBX3-202ENST00000279550 ATP6V1G1O75348 118 aa18.02■□□□□ 0.48
YBX3-202ENST00000279550 GABRR1P24046 479 aa18.02■□□□□ 0.48
YBX3-202ENST00000279550 APLNRP35414 380 aa18.02■□□□□ 0.48
YBX3-202ENST00000279550 UBE2MP61081 183 aaKnown RBP18.02■□□□□ 0.48
YBX3-202ENST00000279550 ARFRP1Q13795 201 aa18.02■□□□□ 0.48
YBX3-202ENST00000279550 C2orf68Q2NKX9 166 aa18.02■□□□□ 0.48
YBX3-202ENST00000279550 SIGIRRQ6IA17 410 aa18.02■□□□□ 0.48
YBX3-202ENST00000279550 MUC20Q8N307 709 aaPredicted RBP18.02■□□□□ 0.48
YBX3-202ENST00000279550 SPICQ8N5J4 248 aa18.02■□□□□ 0.48
YBX3-202ENST00000279550 WDR89Q96FK6 387 aaPredicted RBP18.02■□□□□ 0.48
YBX3-202ENST00000279550 CPNE2Q96FN4 548 aaPredicted RBP18.02■□□□□ 0.48
YBX3-202ENST00000279550 SLC25A21Q9BQT8 299 aaPredicted RBP18.02■□□□□ 0.48
YBX3-202ENST00000279550 SFXN3Q9BWM7 321 aa18.02■□□□□ 0.48
YBX3-202ENST00000279550 PIPOXQ9P0Z9 390 aa18.02■□□□□ 0.48
YBX3-202ENST00000279550 VSIG4Q9Y279 399 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms