RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 RDH10Q8IZV5 341 aa11.87□□□□□ -0.51
HMGN3-201ENST00000275036 BATF2Q8N1L9 274 aa11.87□□□□□ -0.51
HMGN3-201ENST00000275036 Q8N7P7 452 aa11.87□□□□□ -0.51
HMGN3-201ENST00000275036 POC1AQ8NBT0 407 aa11.87□□□□□ -0.51
HMGN3-201ENST00000275036 ZNRF1Q8ND25 227 aa11.87□□□□□ -0.51
HMGN3-201ENST00000275036 C8orf46Q8TAG6 207 aa11.87□□□□□ -0.51
HMGN3-201ENST00000275036 ZNF671Q8TAW3 534 aa11.87□□□□□ -0.51
HMGN3-201ENST00000275036 TMIGD2Q96BF3 282 aa11.87□□□□□ -0.51
HMGN3-201ENST00000275036 ONECUT1Q9UBC0 465 aa11.87□□□□□ -0.51
HMGN3-201ENST00000275036 SLC25A10Q9UBX3 287 aaPredicted RBP11.87□□□□□ -0.51
HMGN3-201ENST00000275036 GMPPBQ9Y5P6 360 aa11.87□□□□□ -0.51
HMGN3-201ENST00000275036 KPTNQ9Y664 436 aa11.87□□□□□ -0.51
HMGN3-201ENST00000275036 IGKV1-27A0A075B6S5 117 aa11.86□□□□□ -0.51
HMGN3-201ENST00000275036 IGHV1-69DA0A0B4J2H0 117 aa11.86□□□□□ -0.51
HMGN3-201ENST00000275036 A0A1B0GVI7 797 aa11.86□□□□□ -0.51
HMGN3-201ENST00000275036 LOC107986453A0A1B0GWG9 222 aa11.86□□□□□ -0.51
HMGN3-201ENST00000275036 ANKRD61A6NGH8 418 aa11.86□□□□□ -0.51
HMGN3-201ENST00000275036 GPR37O15354 613 aa11.86□□□□□ -0.51
HMGN3-201ENST00000275036 NOS1APO75052 506 aaPredicted RBP11.86□□□□□ -0.51
HMGN3-201ENST00000275036 IGHV1-69P01742 117 aa11.86□□□□□ -0.51
HMGN3-201ENST00000275036 MPZP25189 248 aa11.86□□□□□ -0.51
HMGN3-201ENST00000275036 OR12D2P58182 307 aa11.86□□□□□ -0.51
HMGN3-201ENST00000275036 BPIFB3P59826 476 aa11.86□□□□□ -0.51
HMGN3-201ENST00000275036 NANOS3P60323 173 aaKnown RBP11.86□□□□□ -0.51
HMGN3-201ENST00000275036 ZNF91Q05481 1191 aa11.86□□□□□ -0.51
HMGN3-201ENST00000275036 PDCD1Q15116 288 aa11.86□□□□□ -0.51
HMGN3-201ENST00000275036 ZBTB49Q6ZSB9 765 aa11.86□□□□□ -0.51
HMGN3-201ENST00000275036 ANGPTL5Q86XS5 388 aa11.86□□□□□ -0.51
HMGN3-201ENST00000275036 ZNF573Q86YE8 665 aa11.86□□□□□ -0.51
HMGN3-201ENST00000275036 C10orf67Q8IYJ2 551 aa11.86□□□□□ -0.51
HMGN3-201ENST00000275036 CD177Q8N6Q3 437 aa11.86□□□□□ -0.51
HMGN3-201ENST00000275036 OR2G2Q8NGZ5 317 aa11.86□□□□□ -0.51
HMGN3-201ENST00000275036 TRMT10AQ8TBZ6 339 aaKnown RBP11.86□□□□□ -0.51
HMGN3-201ENST00000275036 NPRL2Q8WTW4 380 aa11.86□□□□□ -0.51
HMGN3-201ENST00000275036 H1FXQ92522 213 aaKnown RBP11.86□□□□□ -0.51
HMGN3-201ENST00000275036 SLC25A28Q96A46 364 aa11.86□□□□□ -0.51
HMGN3-201ENST00000275036 LGALS12Q96DT0 336 aa11.86□□□□□ -0.51
HMGN3-201ENST00000275036 MED30Q96HR3 178 aa11.86□□□□□ -0.51
HMGN3-201ENST00000275036 ZMAT3Q9HA38 289 aaKnown RBP11.86□□□□□ -0.51
HMGN3-201ENST00000275036 SIRT7Q9NRC8 400 aa11.86□□□□□ -0.51
HMGN3-201ENST00000275036 EXOGQ9Y2C4 368 aaKnown RBP11.86□□□□□ -0.51
HMGN3-201ENST00000275036 CMYA5Q8N3K9 4069 aa11.86□□□□□ -0.51
HMGN3-201ENST00000275036 DAPL1A0PJW8 107 aa11.85□□□□□ -0.51
HMGN3-201ENST00000275036 RFPL4AA6NLU0 287 aa11.85□□□□□ -0.51
HMGN3-201ENST00000275036 RFPL4AL1F8VTS6 287 aa11.85□□□□□ -0.51
HMGN3-201ENST00000275036 DBTP11182 482 aaKnown RBP11.85□□□□□ -0.51
HMGN3-201ENST00000275036 NDUFB7P17568 137 aa11.85□□□□□ -0.51
HMGN3-201ENST00000275036 CEBPDP49716 269 aaPredicted RBP11.85□□□□□ -0.51
HMGN3-201ENST00000275036 CAV3P56539 151 aa11.85□□□□□ -0.51
HMGN3-201ENST00000275036 ERVK11-1P61568 191 aa11.85□□□□□ -0.51
HMGN3-201ENST00000275036 ACTC1P68032 377 aa11.85□□□□□ -0.51
HMGN3-201ENST00000275036 ACTA1P68133 377 aa11.85□□□□□ -0.51
HMGN3-201ENST00000275036 Q6YL49 198 aa11.85□□□□□ -0.51
HMGN3-201ENST00000275036 FAM220AQ7Z4H9 259 aa11.85□□□□□ -0.51
HMGN3-201ENST00000275036 KIR3DL3Q8N743 410 aa11.85□□□□□ -0.51
HMGN3-201ENST00000275036 RHOXF1Q8NHV9 184 aa11.85□□□□□ -0.51
HMGN3-201ENST00000275036 GATAD2BQ8WXI9 593 aa11.85□□□□□ -0.51
HMGN3-201ENST00000275036 SDSLQ96GA7 329 aa11.85□□□□□ -0.51
HMGN3-201ENST00000275036 NRIP2Q9BQI9 281 aa11.85□□□□□ -0.51
HMGN3-201ENST00000275036 ZNF747Q9BV97 191 aa11.85□□□□□ -0.51
HMGN3-201ENST00000275036 CHST5Q9GZS9 411 aa11.85□□□□□ -0.51
HMGN3-201ENST00000275036 PLEKHA1Q9HB21 404 aa11.85□□□□□ -0.51
HMGN3-201ENST00000275036 HES4Q9HCC6 221 aa11.85□□□□□ -0.51
HMGN3-201ENST00000275036 AMBNQ9NP70 447 aa11.85□□□□□ -0.51
HMGN3-201ENST00000275036 TNFRSF19Q9NS68 423 aa11.85□□□□□ -0.51
HMGN3-201ENST00000275036 FAM118AQ9NWS6 357 aa11.85□□□□□ -0.51
HMGN3-201ENST00000275036 RASL12Q9NYN1 266 aa11.85□□□□□ -0.51
HMGN3-201ENST00000275036 FRRS1LQ9P0K9 344 aa11.85□□□□□ -0.51
HMGN3-201ENST00000275036 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.85□□□□□ -0.51
HMGN3-201ENST00000275036 MYRFQ9Y2G1 1151 aa11.85□□□□□ -0.51
HMGN3-201ENST00000275036 MGAM2Q2M2H8 2515 aa11.84□□□□□ -0.51
HMGN3-201ENST00000275036 A0A0U1RQK1 487 aa11.84□□□□□ -0.51
HMGN3-201ENST00000275036 LOC100130705A0A1B0GUX0 176 aa11.84□□□□□ -0.51
HMGN3-201ENST00000275036 FAM230AA0A1W2PPH8 454 aa11.84□□□□□ -0.51
HMGN3-201ENST00000275036 F8VVB4 439 aa11.84□□□□□ -0.51
HMGN3-201ENST00000275036 F8VWA3 439 aa11.84□□□□□ -0.51
HMGN3-201ENST00000275036 RNASEK-C17orf49H0YIS7 233 aa11.84□□□□□ -0.51
HMGN3-201ENST00000275036 SLC16A6O15403 523 aa11.84□□□□□ -0.51
HMGN3-201ENST00000275036 MELTFP08582 738 aa11.84□□□□□ -0.51
HMGN3-201ENST00000275036 UBCP0CG48 685 aaKnown RBP11.84□□□□□ -0.51
HMGN3-201ENST00000275036 FOXL1Q12952 345 aa11.84□□□□□ -0.51
HMGN3-201ENST00000275036 KLRD1Q13241 179 aa11.84□□□□□ -0.51
HMGN3-201ENST00000275036 SMIM21Q3B7S5 101 aa11.84□□□□□ -0.51
HMGN3-201ENST00000275036 FDX2Q6P4F2 183 aa11.84□□□□□ -0.51
HMGN3-201ENST00000275036 ACBD7Q8N6N7 88 aa11.84□□□□□ -0.51
HMGN3-201ENST00000275036 TMEM185AQ8NFB2 350 aa11.84□□□□□ -0.51
HMGN3-201ENST00000275036 OR10AC1Q8NH08 325 aa11.84□□□□□ -0.51
HMGN3-201ENST00000275036 APH1BQ8WW43 257 aa11.84□□□□□ -0.51
HMGN3-201ENST00000275036 TNFRSF14Q92956 283 aa11.84□□□□□ -0.51
HMGN3-201ENST00000275036 ADAT3Q96EY9 351 aaPredicted RBP11.84□□□□□ -0.51
HMGN3-201ENST00000275036 PELI1Q96FA3 418 aa11.84□□□□□ -0.51
HMGN3-201ENST00000275036 DMRTB1Q96MA1 342 aa11.84□□□□□ -0.51
HMGN3-201ENST00000275036 ZNF649Q9BS31 505 aa11.84□□□□□ -0.51
HMGN3-201ENST00000275036 KIAA2026Q5HYC2 2103 aa11.83□□□□□ -0.52
HMGN3-201ENST00000275036 IGKV1-9A0A0C4DH69 117 aa11.83□□□□□ -0.52
HMGN3-201ENST00000275036 J3QLW9 94 aa11.83□□□□□ -0.52
HMGN3-201ENST00000275036 NXPH2O95156 264 aa11.83□□□□□ -0.52
HMGN3-201ENST00000275036 BAG2O95816 211 aa11.83□□□□□ -0.52
HMGN3-201ENST00000275036 ZNF19P17023 458 aa11.83□□□□□ -0.52
HMGN3-201ENST00000275036 MDKP21741 143 aaPredicted RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms