RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 PLXDC2Q6UX71 529 aa10.87□□□□□ -0.67
CHMP3-201ENST00000263856 OR14K1Q8NGZ2 314 aa10.87□□□□□ -0.67
CHMP3-201ENST00000263856 POC1BQ8TC44 478 aa10.87□□□□□ -0.67
CHMP3-201ENST00000263856 SAT2Q96F10 170 aaPredicted RBP10.87□□□□□ -0.67
CHMP3-201ENST00000263856 LYZL4Q96KX0 146 aa10.87□□□□□ -0.67
CHMP3-201ENST00000263856 GPHA2Q96T91 129 aa10.87□□□□□ -0.67
CHMP3-201ENST00000263856 OCSTAMPQ9BR26 566 aa10.87□□□□□ -0.67
CHMP3-201ENST00000263856 MRPL13Q9BYD1 178 aaKnown RBP10.87□□□□□ -0.67
CHMP3-201ENST00000263856 TRBV23-1A0A0A0MS06 115 aa10.86□□□□□ -0.67
CHMP3-201ENST00000263856 C7orf77A4D0Y5 90 aa10.86□□□□□ -0.67
CHMP3-201ENST00000263856 H2AFB1P0C5Y9 115 aa10.86□□□□□ -0.67
CHMP3-201ENST00000263856 CD37P11049 281 aa10.86□□□□□ -0.67
CHMP3-201ENST00000263856 IGFBP4P22692 258 aa10.86□□□□□ -0.67
CHMP3-201ENST00000263856 CSNK1A1P48729 337 aa10.86□□□□□ -0.67
CHMP3-201ENST00000263856 DVL1P1P54792 670 aaPredicted RBP10.86□□□□□ -0.67
CHMP3-201ENST00000263856 DCDP81605 110 aaKnown RBP10.86□□□□□ -0.67
CHMP3-201ENST00000263856 GUK1Q16774 197 aa10.86□□□□□ -0.67
CHMP3-201ENST00000263856 OR11L1Q8NGX0 322 aa10.86□□□□□ -0.67
CHMP3-201ENST00000263856 HIST1H2BAQ96A08 127 aa10.86□□□□□ -0.67
CHMP3-201ENST00000263856 MOB1AQ9H8S9 216 aa10.86□□□□□ -0.67
CHMP3-201ENST00000263856 KLF2Q9Y5W3 355 aaPredicted RBP10.86□□□□□ -0.67
CHMP3-201ENST00000263856 UMAD1C9J7I0 102 aa10.86□□□□□ -0.67
CHMP3-201ENST00000263856 H3BMH7 237 aa10.86□□□□□ -0.67
CHMP3-201ENST00000263856 GPR37O15354 613 aa10.86□□□□□ -0.67
CHMP3-201ENST00000263856 TLX3O43711 291 aaPredicted RBP10.86□□□□□ -0.67
CHMP3-201ENST00000263856 JTBO76095 146 aa10.86□□□□□ -0.67
CHMP3-201ENST00000263856 CELA2AP08217 269 aa10.86□□□□□ -0.67
CHMP3-201ENST00000263856 FOSL2P15408 326 aa10.86□□□□□ -0.67
CHMP3-201ENST00000263856 GSK3AP49840 483 aa10.86□□□□□ -0.67
CHMP3-201ENST00000263856 LBX1P52954 281 aa10.86□□□□□ -0.67
CHMP3-201ENST00000263856 NHLH2Q02577 135 aa10.86□□□□□ -0.67
CHMP3-201ENST00000263856 NKAIN1Q4KMZ8 207 aa10.86□□□□□ -0.67
CHMP3-201ENST00000263856 SGK3Q96BR1 496 aa10.86□□□□□ -0.67
CHMP3-201ENST00000263856 ZNF501Q96CX3 271 aaPredicted RBP10.86□□□□□ -0.67
CHMP3-201ENST00000263856 UCN2Q96RP3 112 aa10.86□□□□□ -0.67
CHMP3-201ENST00000263856 WBP1LQ9NX94 342 aa10.86□□□□□ -0.67
CHMP3-201ENST00000263856 NUDT19A8MXV4 375 aa10.85□□□□□ -0.67
CHMP3-201ENST00000263856 RPS2P15880 293 aaKnown RBP10.85□□□□□ -0.67
CHMP3-201ENST00000263856 NCMAPQ5T1S8 102 aa10.85□□□□□ -0.67
CHMP3-201ENST00000263856 FBXW12Q6X9E4 464 aa10.85□□□□□ -0.67
CHMP3-201ENST00000263856 LHFPL1Q86WI0 220 aa10.85□□□□□ -0.67
CHMP3-201ENST00000263856 SLC25A43Q8WUT9 341 aaPredicted RBP10.85□□□□□ -0.67
CHMP3-201ENST00000263856 DEFB126Q9BYW3 111 aa10.85□□□□□ -0.67
CHMP3-201ENST00000263856 ZNF700Q9H0M5 742 aa10.85□□□□□ -0.67
CHMP3-201ENST00000263856 AKIRIN1Q9H9L7 192 aaPredicted RBP10.85□□□□□ -0.67
CHMP3-201ENST00000263856 FAM212BQ9NTI7 297 aaPredicted RBP10.85□□□□□ -0.67
CHMP3-201ENST00000263856 KCNIP3Q9Y2W7 256 aa10.85□□□□□ -0.67
CHMP3-201ENST00000263856 NPIPA2E9PIF3 369 aa10.85□□□□□ -0.67
CHMP3-201ENST00000263856 NPIPA3F8WFD2 350 aa10.85□□□□□ -0.67
CHMP3-201ENST00000263856 MASP2O00187 686 aa10.85□□□□□ -0.67
CHMP3-201ENST00000263856 FABP1P07148 127 aa10.85□□□□□ -0.67
CHMP3-201ENST00000263856 PHYHD1Q5SRE7 291 aa10.85□□□□□ -0.67
CHMP3-201ENST00000263856 D2HGDHQ8N465 521 aa10.85□□□□□ -0.67
CHMP3-201ENST00000263856 RTN4IP1Q8WWV3 396 aaPredicted RBP10.85□□□□□ -0.67
CHMP3-201ENST00000263856 GNRHR2Q96P88 292 aa10.85□□□□□ -0.67
CHMP3-201ENST00000263856 ZNF385AQ96PM9 386 aaKnown RBP10.85□□□□□ -0.67
CHMP3-201ENST00000263856 PIGQQ9BRB3 760 aa10.85□□□□□ -0.67
CHMP3-201ENST00000263856 DNAJB11Q9UBS4 358 aa10.85□□□□□ -0.67
CHMP3-201ENST00000263856 URGCP-MRPS24S4R325 110 aa10.85□□□□□ -0.67
CHMP3-201ENST00000263856 FIGNL2A6NMB9 653 aa10.85□□□□□ -0.67
CHMP3-201ENST00000263856 M0R135 149 aa10.85□□□□□ -0.67
CHMP3-201ENST00000263856 PHF1O43189 567 aaPredicted RBP10.85□□□□□ -0.67
CHMP3-201ENST00000263856 GDF9O60383 454 aa10.85□□□□□ -0.67
CHMP3-201ENST00000263856 SCRG1O75711 98 aa10.85□□□□□ -0.67
CHMP3-201ENST00000263856 PIAS2O75928 621 aa10.85□□□□□ -0.67
CHMP3-201ENST00000263856 FCGR3AP08637 254 aa10.85□□□□□ -0.67
CHMP3-201ENST00000263856 ZNF728P0DKX0 622 aa10.85□□□□□ -0.67
CHMP3-201ENST00000263856 CTAG1AP78358 180 aa10.85□□□□□ -0.67
CHMP3-201ENST00000263856 ECH1Q13011 328 aa10.85□□□□□ -0.67
CHMP3-201ENST00000263856 SNAI3Q3KNW1 292 aa10.85□□□□□ -0.67
CHMP3-201ENST00000263856 C10orf91Q5T1B1 145 aa10.85□□□□□ -0.67
CHMP3-201ENST00000263856 SLC22A25Q6T423 547 aa10.85□□□□□ -0.67
CHMP3-201ENST00000263856 BTNL8Q6UX41 500 aa10.85□□□□□ -0.67
CHMP3-201ENST00000263856 ZNF837Q96EG3 531 aaPredicted RBP10.85□□□□□ -0.67
CHMP3-201ENST00000263856 ZNF799Q96GE5 643 aa10.85□□□□□ -0.67
CHMP3-201ENST00000263856 SHDQ96IW2 340 aa10.85□□□□□ -0.67
CHMP3-201ENST00000263856 KCNJ16Q9NPI9 418 aa10.85□□□□□ -0.67
CHMP3-201ENST00000263856 GPR27Q9NS67 375 aa10.85□□□□□ -0.67
CHMP3-201ENST00000263856 CACFD1Q9UGQ2 172 aa10.85□□□□□ -0.67
CHMP3-201ENST00000263856 KPTNQ9Y664 436 aa10.85□□□□□ -0.67
CHMP3-201ENST00000263856 COL4A2P08572 1712 aa10.85□□□□□ -0.67
CHMP3-201ENST00000263856 DIDO1Q9BTC0 2240 aaKnown RBP10.85□□□□□ -0.67
CHMP3-201ENST00000263856 HSPB6O14558 160 aa10.84□□□□□ -0.67
CHMP3-201ENST00000263856 TAAR5O14804 337 aa10.84□□□□□ -0.67
CHMP3-201ENST00000263856 DEDDO75618 318 aa10.84□□□□□ -0.67
CHMP3-201ENST00000263856 MBPP02686 304 aaPredicted RBP10.84□□□□□ -0.67
CHMP3-201ENST00000263856 PIGYQ3MUY2 71 aa10.84□□□□□ -0.67
CHMP3-201ENST00000263856 SPIN3Q5JUX0 258 aa10.84□□□□□ -0.67
CHMP3-201ENST00000263856 ZNF529Q6P280 563 aa10.84□□□□□ -0.67
CHMP3-201ENST00000263856 C5orf24Q7Z6I8 188 aa10.84□□□□□ -0.67
CHMP3-201ENST00000263856 ZNF565Q8N9K5 539 aa10.84□□□□□ -0.67
CHMP3-201ENST00000263856 OR52M1Q8NGK5 317 aa10.84□□□□□ -0.67
CHMP3-201ENST00000263856 SLC22A8Q8TCC7 542 aa10.84□□□□□ -0.67
CHMP3-201ENST00000263856 TCEAL3Q969E4 200 aa10.84□□□□□ -0.67
CHMP3-201ENST00000263856 MRGPRX4Q96LA9 322 aa10.84□□□□□ -0.67
CHMP3-201ENST00000263856 MAGT1Q9H0U3 335 aa10.84□□□□□ -0.67
CHMP3-201ENST00000263856 PNRC2Q9NPJ4 139 aaKnown RBP10.84□□□□□ -0.67
CHMP3-201ENST00000263856 AK3Q9UIJ7 227 aa10.84□□□□□ -0.67
CHMP3-201ENST00000263856 BORCS7-ASMTA0A0B4J1R7 106 aa10.84□□□□□ -0.67
CHMP3-201ENST00000263856 A0A1W2PR77 199 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms