RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 OR5B21A6NL26 309 aa8.25□□□□□ -1.09
SNRNP40-201ENST00000263694 B9A039 149 aa8.25□□□□□ -1.09
SNRNP40-201ENST00000263694 M0R233 179 aa8.25□□□□□ -1.09
SNRNP40-201ENST00000263694 CDIPTO14735 213 aa8.25□□□□□ -1.09
SNRNP40-201ENST00000263694 VSIG8P0DPA2 414 aa8.25□□□□□ -1.09
SNRNP40-201ENST00000263694 COX6B1P14854 86 aa8.25□□□□□ -1.09
SNRNP40-201ENST00000263694 ELK1P19419 428 aa8.25□□□□□ -1.09
SNRNP40-201ENST00000263694 BCL3P20749 454 aa8.25□□□□□ -1.09
SNRNP40-201ENST00000263694 SERPINA2P20848 420 aa8.25□□□□□ -1.09
SNRNP40-201ENST00000263694 TNFSF8P32971 234 aa8.25□□□□□ -1.09
SNRNP40-201ENST00000263694 NPBWR2P48146 333 aa8.25□□□□□ -1.09
SNRNP40-201ENST00000263694 CCL8P80075 99 aa8.25□□□□□ -1.09
SNRNP40-201ENST00000263694 QRFPP83859 136 aa8.25□□□□□ -1.09
SNRNP40-201ENST00000263694 UNC119Q13432 240 aa8.25□□□□□ -1.09
SNRNP40-201ENST00000263694 SLC22A6Q4U2R8 563 aa8.25□□□□□ -1.09
SNRNP40-201ENST00000263694 CDH26Q8IXH8 852 aa8.25□□□□□ -1.09
SNRNP40-201ENST00000263694 FBXL14Q8N1E6 418 aa8.25□□□□□ -1.09
SNRNP40-201ENST00000263694 PNLDC1Q8NA58 520 aaKnown RBP8.25□□□□□ -1.09
SNRNP40-201ENST00000263694 TMEM104Q8NE00 496 aa8.25□□□□□ -1.09
SNRNP40-201ENST00000263694 OR51F2Q8NH61 342 aa8.25□□□□□ -1.09
SNRNP40-201ENST00000263694 AQP3Q92482 292 aa8.25□□□□□ -1.09
SNRNP40-201ENST00000263694 SLC25A38Q96DW6 304 aa8.25□□□□□ -1.09
SNRNP40-201ENST00000263694 OR2V2Q96R30 315 aa8.25□□□□□ -1.09
SNRNP40-201ENST00000263694 SLC22A4Q9H015 551 aa8.25□□□□□ -1.09
SNRNP40-201ENST00000263694 MTCH1Q9NZJ7 389 aa8.25□□□□□ -1.09
SNRNP40-201ENST00000263694 USF3Q68DE3 2245 aa8.25□□□□□ -1.09
SNRNP40-201ENST00000263694 RAI1Q7Z5J4 1906 aaPredicted RBP8.25□□□□□ -1.09
SNRNP40-201ENST00000263694 CRYBG3Q68DQ2 2970 aa8.24□□□□□ -1.09
SNRNP40-201ENST00000263694 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.24□□□□□ -1.09
SNRNP40-201ENST00000263694 FAM221AA4D161 298 aa8.24□□□□□ -1.09
SNRNP40-201ENST00000263694 A6NLC8 198 aa8.24□□□□□ -1.09
SNRNP40-201ENST00000263694 C17orf100A8MU93 164 aa8.24□□□□□ -1.09
SNRNP40-201ENST00000263694 LDLRAD4O15165 306 aa8.24□□□□□ -1.09
SNRNP40-201ENST00000263694 CTAG2O75638 210 aa8.24□□□□□ -1.09
SNRNP40-201ENST00000263694 CRTAPO75718 401 aaPredicted RBP8.24□□□□□ -1.09
SNRNP40-201ENST00000263694 HTR3BO95264 441 aa8.24□□□□□ -1.09
SNRNP40-201ENST00000263694 SFTPBP07988 381 aa8.24□□□□□ -1.09
SNRNP40-201ENST00000263694 DANCRP0C864 163 aa8.24□□□□□ -1.09
SNRNP40-201ENST00000263694 CFPP27918 469 aa8.24□□□□□ -1.09
SNRNP40-201ENST00000263694 PMELP40967 661 aa8.24□□□□□ -1.09
SNRNP40-201ENST00000263694 EVX1P49640 407 aa8.24□□□□□ -1.09
SNRNP40-201ENST00000263694 SNU13P55769 128 aaKnown RBP8.24□□□□□ -1.09
SNRNP40-201ENST00000263694 TNFAIP6P98066 277 aaPredicted RBP8.24□□□□□ -1.09
SNRNP40-201ENST00000263694 RIN1Q13671 783 aa8.24□□□□□ -1.09
SNRNP40-201ENST00000263694 EFNB3Q15768 340 aa8.24□□□□□ -1.09
SNRNP40-201ENST00000263694 MOGQ16653 247 aa8.24□□□□□ -1.09
SNRNP40-201ENST00000263694 FAM76BQ5HYJ3 339 aa8.24□□□□□ -1.09
SNRNP40-201ENST00000263694 MZT2AQ6P582 158 aa8.24□□□□□ -1.09
SNRNP40-201ENST00000263694 RTN4RL2Q86UN3 420 aa8.24□□□□□ -1.09
SNRNP40-201ENST00000263694 CMTM4Q8IZR5 234 aa8.24□□□□□ -1.09
SNRNP40-201ENST00000263694 AP3S1Q92572 193 aa8.24□□□□□ -1.09
SNRNP40-201ENST00000263694 SEH1LQ96EE3 360 aa8.24□□□□□ -1.09
SNRNP40-201ENST00000263694 MEGF10Q96KG7 1140 aa8.24□□□□□ -1.09
SNRNP40-201ENST00000263694 VRK1Q99986 396 aaPredicted RBP8.24□□□□□ -1.09
SNRNP40-201ENST00000263694 DYNLRB1Q9NP97 96 aa8.24□□□□□ -1.09
SNRNP40-201ENST00000263694 NKIRAS2Q9NYR9 191 aa8.24□□□□□ -1.09
SNRNP40-201ENST00000263694 ZNF581Q9P0T4 197 aa8.24□□□□□ -1.09
SNRNP40-201ENST00000263694 ABRACLQ9P1F3 81 aa8.24□□□□□ -1.09
SNRNP40-201ENST00000263694 IL36RNQ9UBH0 155 aa8.24□□□□□ -1.09
SNRNP40-201ENST00000263694 SPATA2Q9UM82 520 aa8.24□□□□□ -1.09
SNRNP40-201ENST00000263694 LAMP3Q9UQV4 416 aa8.24□□□□□ -1.09
SNRNP40-201ENST00000263694 SPG11Q96JI7 2443 aa8.24□□□□□ -1.09
SNRNP40-201ENST00000263694 LRP5LA4QPB2 252 aa8.23□□□□□ -1.09
SNRNP40-201ENST00000263694 FAM25AB3EWG3 89 aa8.23□□□□□ -1.09
SNRNP40-201ENST00000263694 FAM25CB3EWG5 89 aa8.23□□□□□ -1.09
SNRNP40-201ENST00000263694 FAM25GB3EWG6 89 aa8.23□□□□□ -1.09
SNRNP40-201ENST00000263694 WNT9BO14905 357 aa8.23□□□□□ -1.09
SNRNP40-201ENST00000263694 AKR7A2O43488 359 aa8.23□□□□□ -1.09
SNRNP40-201ENST00000263694 BPNT1O95861 308 aa8.23□□□□□ -1.09
SNRNP40-201ENST00000263694 MPIG6BO95866 241 aa8.23□□□□□ -1.09
SNRNP40-201ENST00000263694 BMP4P12644 408 aa8.23□□□□□ -1.09
SNRNP40-201ENST00000263694 CD200P41217 278 aa8.23□□□□□ -1.09
SNRNP40-201ENST00000263694 LSAMPQ13449 338 aa8.23□□□□□ -1.09
SNRNP40-201ENST00000263694 PDCD1Q15116 288 aa8.23□□□□□ -1.09
SNRNP40-201ENST00000263694 RSU1Q15404 277 aa8.23□□□□□ -1.09
SNRNP40-201ENST00000263694 ASCL4Q6XD76 172 aa8.23□□□□□ -1.09
SNRNP40-201ENST00000263694 MOGAT3Q86VF5 341 aa8.23□□□□□ -1.09
SNRNP40-201ENST00000263694 ZNF573Q86YE8 665 aa8.23□□□□□ -1.09
SNRNP40-201ENST00000263694 IZUMO1Q8IYV9 350 aa8.23□□□□□ -1.09
SNRNP40-201ENST00000263694 ZNF295-AS1Q8N0V1 137 aa8.23□□□□□ -1.09
SNRNP40-201ENST00000263694 ACOT12Q8WYK0 555 aa8.23□□□□□ -1.09
SNRNP40-201ENST00000263694 S100A13Q99584 98 aa8.23□□□□□ -1.09
SNRNP40-201ENST00000263694 NICN1Q9BSH3 213 aa8.23□□□□□ -1.09
SNRNP40-201ENST00000263694 METTL9Q9H1A3 318 aa8.23□□□□□ -1.09
SNRNP40-201ENST00000263694 CYSLTR2Q9NS75 346 aa8.23□□□□□ -1.09
SNRNP40-201ENST00000263694 RBFOX1Q9NWB1 397 aaKnown RBP8.23□□□□□ -1.09
SNRNP40-201ENST00000263694 C14orf119Q9NWQ9 140 aa8.23□□□□□ -1.09
SNRNP40-201ENST00000263694 C1orf123Q9NWV4 160 aa8.23□□□□□ -1.09
SNRNP40-201ENST00000263694 DCAF16Q9NXF7 216 aa8.23□□□□□ -1.09
SNRNP40-201ENST00000263694 ZDHHC8Q9ULC8 765 aa8.23□□□□□ -1.09
SNRNP40-201ENST00000263694 NOP16Q9Y3C1 178 aaKnown RBP8.23□□□□□ -1.09
SNRNP40-201ENST00000263694 PEX16Q9Y5Y5 336 aa8.23□□□□□ -1.09
SNRNP40-201ENST00000263694 CACNG2Q9Y698 323 aa8.23□□□□□ -1.09
SNRNP40-201ENST00000263694 A3GALT2U3KPV4 340 aa8.23□□□□□ -1.09
SNRNP40-201ENST00000263694 A0A0A6YYD4 124 aa8.22□□□□□ -1.09
SNRNP40-201ENST00000263694 hCG_1807616A0A1W2PRN6 198 aa8.22□□□□□ -1.09
SNRNP40-201ENST00000263694 TMEM210A6NLX4 147 aa8.22□□□□□ -1.09
SNRNP40-201ENST00000263694 TMEM14DPA8MWL7 114 aa8.22□□□□□ -1.09
SNRNP40-201ENST00000263694 J3QT63 122 aa8.22□□□□□ -1.09
SNRNP40-201ENST00000263694 TPD52L2O43399 206 aaKnown RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms