RNA–Protein interactions for RNA: ENST00000263071.8

SCARF1-201, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCARF1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-201ENST00000263071 CDC6Q99741 560 aa12.58□□□□□ -0.4
SCARF1-201ENST00000263071 PDE7BQ9NP56 450 aa12.58□□□□□ -0.4
SCARF1-201ENST00000263071 PRRC2CQ9Y520 2896 aaKnown RBP12.57□□□□□ -0.4
SCARF1-201ENST00000263071 PNLIPP16233 465 aa12.57□□□□□ -0.4
SCARF1-201ENST00000263071 IL12BP29460 328 aa12.57□□□□□ -0.4
SCARF1-201ENST00000263071 ALDH3B1P43353 468 aa12.57□□□□□ -0.4
SCARF1-201ENST00000263071 RAP1BP61224 184 aa12.57□□□□□ -0.4
SCARF1-201ENST00000263071 SELENOTP62341 195 aa12.57□□□□□ -0.4
SCARF1-201ENST00000263071 OR8G2PQ6IF36 304 aa12.57□□□□□ -0.4
SCARF1-201ENST00000263071 TMEM184AQ6ZMB5 413 aa12.57□□□□□ -0.4
SCARF1-201ENST00000263071 COX15Q7KZN9 410 aa12.57□□□□□ -0.4
SCARF1-201ENST00000263071 GKN2Q86XP6 184 aa12.57□□□□□ -0.4
SCARF1-201ENST00000263071 SMIM3Q9BZL3 60 aa12.57□□□□□ -0.4
SCARF1-201ENST00000263071 C1orf198Q9H425 327 aa12.57□□□□□ -0.4
SCARF1-201ENST00000263071 HPRT1P00492 218 aa12.57□□□□□ -0.4
SCARF1-201ENST00000263071 MFGE8Q08431 387 aaPredicted RBP12.57□□□□□ -0.4
SCARF1-201ENST00000263071 NKAIN1Q4KMZ8 207 aa12.57□□□□□ -0.4
SCARF1-201ENST00000263071 FHL5Q5TD97 284 aa12.57□□□□□ -0.4
SCARF1-201ENST00000263071 ZNF584Q8IVC4 421 aa12.57□□□□□ -0.4
SCARF1-201ENST00000263071 TSPAN32Q96QS1 320 aa12.57□□□□□ -0.4
SCARF1-201ENST00000263071 ZNF430Q9H8G1 570 aaPredicted RBP12.57□□□□□ -0.4
SCARF1-201ENST00000263071 CHST11Q9NPF2 352 aa12.57□□□□□ -0.4
SCARF1-201ENST00000263071 MSRAQ9UJ68 235 aa12.57□□□□□ -0.4
SCARF1-201ENST00000263071 ZNF264O43296 627 aa12.56□□□□□ -0.4
SCARF1-201ENST00000263071 NKX2-2O95096 273 aa12.56□□□□□ -0.4
SCARF1-201ENST00000263071 SLC35E2P0CK97 266 aa12.56□□□□□ -0.4
SCARF1-201ENST00000263071 FGF5P12034 268 aa12.56□□□□□ -0.4
SCARF1-201ENST00000263071 PRSS12P56730 875 aa12.56□□□□□ -0.4
SCARF1-201ENST00000263071 PRPS1P60891 318 aa12.56□□□□□ -0.4
SCARF1-201ENST00000263071 MGAT2Q10469 447 aa12.56□□□□□ -0.4
SCARF1-201ENST00000263071 PPP1R1AQ13522 171 aa12.56□□□□□ -0.4
SCARF1-201ENST00000263071 LYG2Q86SG7 212 aa12.56□□□□□ -0.4
SCARF1-201ENST00000263071 OR1P1Q8NH06 330 aa12.56□□□□□ -0.4
SCARF1-201ENST00000263071 TECTBQ96PL2 329 aa12.56□□□□□ -0.4
SCARF1-201ENST00000263071 STACQ99469 402 aa12.56□□□□□ -0.4
SCARF1-201ENST00000263071 CSTL1Q9H114 145 aa12.56□□□□□ -0.4
SCARF1-201ENST00000263071 MRPL22Q9NWU5 206 aaKnown RBP12.56□□□□□ -0.4
SCARF1-201ENST00000263071 COA3Q9Y2R0 106 aaPredicted RBP12.56□□□□□ -0.4
SCARF1-201ENST00000263071 XKRY2A2RUG3 117 aa12.56□□□□□ -0.4
SCARF1-201ENST00000263071 H3BQ15 152 aa12.56□□□□□ -0.4
SCARF1-201ENST00000263071 IL6RP08887 468 aaPredicted RBP12.56□□□□□ -0.4
SCARF1-201ENST00000263071 CT45A8P0DMV1 189 aa12.56□□□□□ -0.4
SCARF1-201ENST00000263071 CT45A9P0DMV2 189 aa12.56□□□□□ -0.4
SCARF1-201ENST00000263071 GFERP55789 205 aa12.56□□□□□ -0.4
SCARF1-201ENST00000263071 FHL1Q13642 323 aa12.56□□□□□ -0.4
SCARF1-201ENST00000263071 CT45A2Q5DJT8 189 aa12.56□□□□□ -0.4
SCARF1-201ENST00000263071 SLC16A9Q7RTY1 509 aa12.56□□□□□ -0.4
SCARF1-201ENST00000263071 OR5L2Q8NGL0 311 aa12.56□□□□□ -0.4
SCARF1-201ENST00000263071 BAHD1Q8TBE0 780 aaPredicted RBP12.56□□□□□ -0.4
SCARF1-201ENST00000263071 ZNF764Q96H86 408 aaPredicted RBP12.56□□□□□ -0.4
SCARF1-201ENST00000263071 PGAM5Q96HS1 289 aa12.56□□□□□ -0.4
SCARF1-201ENST00000263071 SLC26A1Q9H2B4 701 aa12.56□□□□□ -0.4
SCARF1-201ENST00000263071 UCP3P55916 312 aa12.56□□□□□ -0.4
SCARF1-201ENST00000263071 MRPL49Q13405 166 aaKnown RBP12.56□□□□□ -0.4
SCARF1-201ENST00000263071 RAB35Q15286 201 aa12.56□□□□□ -0.4
SCARF1-201ENST00000263071 LINC01590Q5TEZ4 76 aa12.56□□□□□ -0.4
SCARF1-201ENST00000263071 RPUSD3Q6P087 351 aaKnown RBP12.56□□□□□ -0.4
SCARF1-201ENST00000263071 OR4K15Q8NH41 348 aa12.56□□□□□ -0.4
SCARF1-201ENST00000263071 ZNF417Q8TAU3 575 aa12.56□□□□□ -0.4
SCARF1-201ENST00000263071 RTN4RQ9BZR6 473 aa12.56□□□□□ -0.4
SCARF1-201ENST00000263071 PCED1AQ9H1Q7 454 aa12.56□□□□□ -0.4
SCARF1-201ENST00000263071 MED29Q9NX70 200 aa12.56□□□□□ -0.4
SCARF1-201ENST00000263071 FKBP11Q9NYL4 201 aa12.56□□□□□ -0.4
SCARF1-201ENST00000263071 A0A0J9YY10 115 aa12.55□□□□□ -0.4
SCARF1-201ENST00000263071 LOC101059948A0A1B0GTJ6 334 aa12.55□□□□□ -0.4
SCARF1-201ENST00000263071 UPK3AO75631 287 aa12.55□□□□□ -0.4
SCARF1-201ENST00000263071 ZNF205O95201 554 aa12.55□□□□□ -0.4
SCARF1-201ENST00000263071 ACKR1Q16570 336 aa12.55□□□□□ -0.4
SCARF1-201ENST00000263071 RSPO4Q2I0M5 234 aaPredicted RBP12.55□□□□□ -0.4
SCARF1-201ENST00000263071 TMEM240Q5SV17 173 aa12.55□□□□□ -0.4
SCARF1-201ENST00000263071 SLC35E3Q7Z769 313 aa12.55□□□□□ -0.4
SCARF1-201ENST00000263071 SLC2A12Q8TD20 617 aa12.55□□□□□ -0.4
SCARF1-201ENST00000263071 GPER1Q99527 375 aa12.55□□□□□ -0.4
SCARF1-201ENST00000263071 SYT3Q9BQG1 590 aa12.55□□□□□ -0.4
SCARF1-201ENST00000263071 LUZP4Q9P127 313 aa12.55□□□□□ -0.4
SCARF1-201ENST00000263071 ZNF106Q9H2Y7 1883 aaKnown RBP12.55□□□□□ -0.4
SCARF1-201ENST00000263071 CXorf51AA0A1B0GTR3 108 aa12.55□□□□□ -0.4
SCARF1-201ENST00000263071 M0QZ24 198 aa12.55□□□□□ -0.4
SCARF1-201ENST00000263071 LCATP04180 440 aa12.55□□□□□ -0.4
SCARF1-201ENST00000263071 CALCBP10092 127 aa12.55□□□□□ -0.4
SCARF1-201ENST00000263071 HLA-DOBP13765 273 aa12.55□□□□□ -0.4
SCARF1-201ENST00000263071 ZNF823P16415 610 aa12.55□□□□□ -0.4
SCARF1-201ENST00000263071 GNB3P16520 340 aa12.55□□□□□ -0.4
SCARF1-201ENST00000263071 DLK1P80370 383 aa12.55□□□□□ -0.4
SCARF1-201ENST00000263071 NR0B2Q15466 257 aa12.55□□□□□ -0.4
SCARF1-201ENST00000263071 ZNF74Q16587 644 aa12.55□□□□□ -0.4
SCARF1-201ENST00000263071 SLC41A2Q96JW4 573 aa12.55□□□□□ -0.4
SCARF1-201ENST00000263071 ZNF587Q96SQ5 575 aaPredicted RBP12.55□□□□□ -0.4
SCARF1-201ENST00000263071 BANF2Q9H503 90 aa12.55□□□□□ -0.4
SCARF1-201ENST00000263071 MSL2Q9HCI7 577 aa12.55□□□□□ -0.4
SCARF1-201ENST00000263071 TMED7Q9Y3B3 224 aa12.55□□□□□ -0.4
SCARF1-201ENST00000263071 ABCA7Q8IZY2 2146 aa12.55□□□□□ -0.4
SCARF1-201ENST00000263071 IGKV1D-42A0A075B6H8 117 aa12.55□□□□□ -0.4
SCARF1-201ENST00000263071 ZNF320A2RRD8 509 aa12.55□□□□□ -0.4
SCARF1-201ENST00000263071 OR4C45A6NMZ5 311 aa12.55□□□□□ -0.4
SCARF1-201ENST00000263071 K7EQS6 105 aa12.55□□□□□ -0.4
SCARF1-201ENST00000263071 HNRNPA2B1P22626 353 aaKnown RBP12.55□□□□□ -0.4
SCARF1-201ENST00000263071 SRSF4Q08170 494 aaKnown RBP12.55□□□□□ -0.4
SCARF1-201ENST00000263071 AADACL3Q5VUY0 350 aa12.55□□□□□ -0.4
SCARF1-201ENST00000263071 BHLHE23Q8NDY6 225 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms