RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 Q96MF0 132 aa13.97□□□□□ -0.17
CHCHD3-201ENST00000262570 TXNL4BQ9NX01 149 aaKnown RBP13.97□□□□□ -0.17
CHCHD3-201ENST00000262570 POLDIP2Q9Y2S7 368 aa13.97□□□□□ -0.17
CHCHD3-201ENST00000262570 WIPI2Q9Y4P8 454 aa13.97□□□□□ -0.17
CHCHD3-201ENST00000262570 MEGF11A6BM72 1044 aa13.96□□□□□ -0.17
CHCHD3-201ENST00000262570 SRRM5B3KS81 715 aa13.96□□□□□ -0.17
CHCHD3-201ENST00000262570 AKR7A2O43488 359 aa13.96□□□□□ -0.17
CHCHD3-201ENST00000262570 NOS1APO75052 506 aaPredicted RBP13.96□□□□□ -0.17
CHCHD3-201ENST00000262570 FSTL3O95633 263 aa13.96□□□□□ -0.17
CHCHD3-201ENST00000262570 ACAA1P09110 424 aaPredicted RBP13.96□□□□□ -0.17
CHCHD3-201ENST00000262570 ADRA2CP18825 462 aa13.96□□□□□ -0.17
CHCHD3-201ENST00000262570 GADD45AP24522 165 aa13.96□□□□□ -0.17
CHCHD3-201ENST00000262570 ZNF93P35789 620 aaPredicted RBP13.96□□□□□ -0.17
CHCHD3-201ENST00000262570 NR4A2P43354 598 aa13.96□□□□□ -0.17
CHCHD3-201ENST00000262570 PDZK1IP1Q13113 114 aa13.96□□□□□ -0.17
CHCHD3-201ENST00000262570 FAM201AQ5SY85 155 aa13.96□□□□□ -0.17
CHCHD3-201ENST00000262570 C22orf42Q6IC83 251 aa13.96□□□□□ -0.17
CHCHD3-201ENST00000262570 LRRTM1Q86UE6 522 aa13.96□□□□□ -0.17
CHCHD3-201ENST00000262570 RAB1CQ92928 201 aa13.96□□□□□ -0.17
CHCHD3-201ENST00000262570 RFT1Q96AA3 541 aa13.96□□□□□ -0.17
CHCHD3-201ENST00000262570 CPNE2Q96FN4 548 aaPredicted RBP13.96□□□□□ -0.17
CHCHD3-201ENST00000262570 TIMD4Q96H15 378 aa13.96□□□□□ -0.17
CHCHD3-201ENST00000262570 EXOSC4Q9NPD3 245 aaKnown RBP13.96□□□□□ -0.17
CHCHD3-201ENST00000262570 SNTG1Q9NSN8 517 aa13.96□□□□□ -0.17
CHCHD3-201ENST00000262570 SSR3Q9UNL2 185 aa13.96□□□□□ -0.17
CHCHD3-201ENST00000262570 ZNF469Q96JG9 3925 aaPredicted RBP13.96□□□□□ -0.17
CHCHD3-201ENST00000262570 PPIAL4EA0A075B759 164 aa13.96□□□□□ -0.18
CHCHD3-201ENST00000262570 PPIAL4DF5H284 164 aa13.96□□□□□ -0.18
CHCHD3-201ENST00000262570 ZNF205O95201 554 aa13.96□□□□□ -0.18
CHCHD3-201ENST00000262570 PLATP00750 562 aa13.96□□□□□ -0.18
CHCHD3-201ENST00000262570 IGHV2-70P01814 119 aa13.96□□□□□ -0.18
CHCHD3-201ENST00000262570 PPIAL4FP0DN26 164 aa13.96□□□□□ -0.18
CHCHD3-201ENST00000262570 SLC25A16P16260 332 aa13.96□□□□□ -0.18
CHCHD3-201ENST00000262570 POU3F4P49335 361 aa13.96□□□□□ -0.18
CHCHD3-201ENST00000262570 ZP1P60852 638 aa13.96□□□□□ -0.18
CHCHD3-201ENST00000262570 BTG1P62324 171 aa13.96□□□□□ -0.18
CHCHD3-201ENST00000262570 ZMYND11Q15326 602 aa13.96□□□□□ -0.18
CHCHD3-201ENST00000262570 AVPI1Q5T686 147 aa13.96□□□□□ -0.18
CHCHD3-201ENST00000262570 SLC25A26Q70HW3 274 aa13.96□□□□□ -0.18
CHCHD3-201ENST00000262570 SATL1Q86VE3 508 aa13.96□□□□□ -0.18
CHCHD3-201ENST00000262570 LYPD6Q86Y78 171 aa13.96□□□□□ -0.18
CHCHD3-201ENST00000262570 CDH26Q8IXH8 852 aa13.96□□□□□ -0.18
CHCHD3-201ENST00000262570 NKAIN3Q8N8D7 197 aa13.96□□□□□ -0.18
CHCHD3-201ENST00000262570 OR5D18Q8NGL1 313 aa13.96□□□□□ -0.18
CHCHD3-201ENST00000262570 CHCHD6Q9BRQ6 235 aa13.96□□□□□ -0.18
CHCHD3-201ENST00000262570 SLITRK2Q9H156 845 aa13.96□□□□□ -0.18
CHCHD3-201ENST00000262570 MTCH1Q9NZJ7 389 aa13.96□□□□□ -0.18
CHCHD3-201ENST00000262570 SCOCQ9UIL1 159 aa13.96□□□□□ -0.18
CHCHD3-201ENST00000262570 PPIAL4AQ9Y536 164 aa13.96□□□□□ -0.18
CHCHD3-201ENST00000262570 ITPR3Q14573 2671 aa13.95□□□□□ -0.18
CHCHD3-201ENST00000262570 TRAV1-2A0A0B4J238 106 aa13.95□□□□□ -0.18
CHCHD3-201ENST00000262570 SHISA3A0PJX4 238 aa13.95□□□□□ -0.18
CHCHD3-201ENST00000262570 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.95□□□□□ -0.18
CHCHD3-201ENST00000262570 SPRY1O43609 319 aaPredicted RBP13.95□□□□□ -0.18
CHCHD3-201ENST00000262570 PGA5P0DJD9 388 aa13.95□□□□□ -0.18
CHCHD3-201ENST00000262570 EGR1P18146 543 aa13.95□□□□□ -0.18
CHCHD3-201ENST00000262570 TIMM50Q3ZCQ8 353 aa13.95□□□□□ -0.18
CHCHD3-201ENST00000262570 GDPGP1Q6ZNW5 385 aa13.95□□□□□ -0.18
CHCHD3-201ENST00000262570 LRRC28Q86X40 367 aaPredicted RBP13.95□□□□□ -0.18
CHCHD3-201ENST00000262570 MKXQ8IYA7 352 aa13.95□□□□□ -0.18
CHCHD3-201ENST00000262570 POC1AQ8NBT0 407 aa13.95□□□□□ -0.18
CHCHD3-201ENST00000262570 OR51F2Q8NH61 342 aa13.95□□□□□ -0.18
CHCHD3-201ENST00000262570 GPER1Q99527 375 aa13.95□□□□□ -0.18
CHCHD3-201ENST00000262570 NKX3-1Q99801 234 aaPredicted RBP13.95□□□□□ -0.18
CHCHD3-201ENST00000262570 FUNDC2Q9BWH2 189 aa13.95□□□□□ -0.18
CHCHD3-201ENST00000262570 WDR13Q9H1Z4 485 aa13.95□□□□□ -0.18
CHCHD3-201ENST00000262570 TMEM165Q9HC07 324 aa13.95□□□□□ -0.18
CHCHD3-201ENST00000262570 GSTK1Q9Y2Q3 226 aa13.95□□□□□ -0.18
CHCHD3-201ENST00000262570 C3orf80F5H4A9 247 aa13.94□□□□□ -0.18
CHCHD3-201ENST00000262570 WNT9BO14905 357 aa13.94□□□□□ -0.18
CHCHD3-201ENST00000262570 CD37P11049 281 aa13.94□□□□□ -0.18
CHCHD3-201ENST00000262570 RPL5P46777 297 aaKnown RBP13.94□□□□□ -0.18
CHCHD3-201ENST00000262570 ERVK11-1P61568 191 aa13.94□□□□□ -0.18
CHCHD3-201ENST00000262570 TEX36Q5VZQ5 186 aa13.94□□□□□ -0.18
CHCHD3-201ENST00000262570 SFRP4Q6FHJ7 346 aaPredicted RBP13.94□□□□□ -0.18
CHCHD3-201ENST00000262570 BOLLQ8N9W6 283 aaKnown RBP13.94□□□□□ -0.18
CHCHD3-201ENST00000262570 ZSCAN4Q8NAM6 433 aaPredicted RBP13.94□□□□□ -0.18
CHCHD3-201ENST00000262570 C19orf18Q8NEA5 215 aa13.94□□□□□ -0.18
CHCHD3-201ENST00000262570 ZNF488Q96MN9 340 aa13.94□□□□□ -0.18
CHCHD3-201ENST00000262570 NRIP2Q9BQI9 281 aa13.94□□□□□ -0.18
CHCHD3-201ENST00000262570 CREBBPQ92793 2442 aa13.94□□□□□ -0.18
CHCHD3-201ENST00000262570 A0A096LNT2 108 aa13.93□□□□□ -0.18
CHCHD3-201ENST00000262570 IGKV1-12A0A0C4DH73 117 aa13.93□□□□□ -0.18
CHCHD3-201ENST00000262570 LOC100506127A0A0U1RQW1 187 aa13.93□□□□□ -0.18
CHCHD3-201ENST00000262570 OOEPA6NGQ2 149 aa13.93□□□□□ -0.18
CHCHD3-201ENST00000262570 LGALS8O00214 317 aa13.93□□□□□ -0.18
CHCHD3-201ENST00000262570 ANGPTL7O43827 346 aa13.93□□□□□ -0.18
CHCHD3-201ENST00000262570 AIREO43918 545 aa13.93□□□□□ -0.18
CHCHD3-201ENST00000262570 CYB5AP00167 134 aa13.93□□□□□ -0.18
CHCHD3-201ENST00000262570 IGKV1D-12P01611 117 aa13.93□□□□□ -0.18
CHCHD3-201ENST00000262570 TMEM225BP0DP42 221 aa13.93□□□□□ -0.18
CHCHD3-201ENST00000262570 GLRA1P23415 457 aa13.93□□□□□ -0.18
CHCHD3-201ENST00000262570 CD80P33681 288 aa13.93□□□□□ -0.18
CHCHD3-201ENST00000262570 MDH2P40926 338 aaKnown RBP13.93□□□□□ -0.18
CHCHD3-201ENST00000262570 PTGFRP43088 359 aa13.93□□□□□ -0.18
CHCHD3-201ENST00000262570 C1QL2Q7Z5L3 287 aa13.93□□□□□ -0.18
CHCHD3-201ENST00000262570 GPR141Q7Z602 305 aa13.93□□□□□ -0.18
CHCHD3-201ENST00000262570 SAXO1Q8IYX7 474 aa13.93□□□□□ -0.18
CHCHD3-201ENST00000262570 JAGN1Q8N5M9 183 aa13.93□□□□□ -0.18
CHCHD3-201ENST00000262570 PXT1Q8NFP0 134 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms