RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 ZNF320A2RRD8 509 aa14.4□□□□□ -0.1
SREBF1-201ENST00000261646 OR5H15A6NDH6 313 aa14.4□□□□□ -0.1
SREBF1-201ENST00000261646 FRG2CA6NGY1 282 aa14.4□□□□□ -0.1
SREBF1-201ENST00000261646 OR5H1A6NKK0 313 aa14.4□□□□□ -0.1
SREBF1-201ENST00000261646 CYR61O00622 381 aa14.4□□□□□ -0.1
SREBF1-201ENST00000261646 ZIC2O95409 532 aaPredicted RBP14.4□□□□□ -0.1
SREBF1-201ENST00000261646 MMP7P09237 267 aaPredicted RBP14.4□□□□□ -0.1
SREBF1-201ENST00000261646 DRD1P21728 446 aa14.4□□□□□ -0.1
SREBF1-201ENST00000261646 HAAOP46952 286 aa14.4□□□□□ -0.1
SREBF1-201ENST00000261646 PMS2P11Q13670 270 aa14.4□□□□□ -0.1
SREBF1-201ENST00000261646 FBXL14Q8N1E6 418 aa14.4□□□□□ -0.1
SREBF1-201ENST00000261646 SLC39A7Q92504 469 aa14.4□□□□□ -0.1
SREBF1-201ENST00000261646 UCK1Q9HA47 277 aa14.4□□□□□ -0.1
SREBF1-201ENST00000261646 MRPS17Q9Y2R5 130 aaKnown RBP14.4□□□□□ -0.1
SREBF1-201ENST00000261646 ZNF646O15015 1829 aaPredicted RBP14.4□□□□□ -0.1
SREBF1-201ENST00000261646 TRAV14DV4A0A0A6YYC5 116 aa14.4□□□□□ -0.1
SREBF1-201ENST00000261646 GJE1A6NN92 205 aa14.4□□□□□ -0.1
SREBF1-201ENST00000261646 CD8AP01732 235 aa14.4□□□□□ -0.1
SREBF1-201ENST00000261646 MDKP21741 143 aaPredicted RBP14.4□□□□□ -0.1
SREBF1-201ENST00000261646 GFERP55789 205 aa14.4□□□□□ -0.1
SREBF1-201ENST00000261646 EFNB1P98172 346 aa14.4□□□□□ -0.1
SREBF1-201ENST00000261646 RAB31Q13636 194 aa14.4□□□□□ -0.1
SREBF1-201ENST00000261646 ETV3LQ6ZN32 361 aa14.4□□□□□ -0.1
SREBF1-201ENST00000261646 BHLHE23Q8NDY6 225 aa14.4□□□□□ -0.1
SREBF1-201ENST00000261646 OTOFQ9HC10 1997 aa14.4□□□□□ -0.1
SREBF1-201ENST00000261646 SBF1O95248 1867 aa14.39□□□□□ -0.11
SREBF1-201ENST00000261646 ANKRD30BLA7E2S9 258 aa14.39□□□□□ -0.11
SREBF1-201ENST00000261646 WDR1O75083 606 aa14.39□□□□□ -0.11
SREBF1-201ENST00000261646 IGKV1D-16P01601 117 aa14.39□□□□□ -0.11
SREBF1-201ENST00000261646 ST8SIA1Q92185 356 aa14.39□□□□□ -0.11
SREBF1-201ENST00000261646 MRGPRX1Q96LB2 322 aa14.39□□□□□ -0.11
SREBF1-201ENST00000261646 NAA60Q9H7X0 242 aa14.39□□□□□ -0.11
SREBF1-201ENST00000261646 TMED3Q9Y3Q3 217 aa14.39□□□□□ -0.11
SREBF1-201ENST00000261646 ZDBF2Q9HCK1 2354 aa14.39□□□□□ -0.11
SREBF1-201ENST00000261646 GEMIN2O14893 280 aaKnown RBP14.39□□□□□ -0.11
SREBF1-201ENST00000261646 METTL15P1P0C7V9 234 aa14.39□□□□□ -0.11
SREBF1-201ENST00000261646 PEBP1P30086 187 aaKnown RBP14.39□□□□□ -0.11
SREBF1-201ENST00000261646 CSNK1EP49674 416 aaKnown RBP14.39□□□□□ -0.11
SREBF1-201ENST00000261646 LIMK1P53667 647 aa14.39□□□□□ -0.11
SREBF1-201ENST00000261646 RRADP55042 308 aa14.39□□□□□ -0.11
SREBF1-201ENST00000261646 FOXF1Q12946 379 aa14.39□□□□□ -0.11
SREBF1-201ENST00000261646 GPR61Q9BZJ8 451 aa14.39□□□□□ -0.11
SREBF1-201ENST00000261646 ABI3Q9P2A4 366 aa14.39□□□□□ -0.11
SREBF1-201ENST00000261646 TNS1Q9HBL0 1735 aaKnown RBP14.39□□□□□ -0.11
SREBF1-201ENST00000261646 CEP250Q9BV73 2442 aa14.39□□□□□ -0.11
SREBF1-201ENST00000261646 KIR2DS1A0A191URI9 304 aa14.39□□□□□ -0.11
SREBF1-201ENST00000261646 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.39□□□□□ -0.11
SREBF1-201ENST00000261646 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.39□□□□□ -0.11
SREBF1-201ENST00000261646 RNF222A6NCQ9 220 aa14.39□□□□□ -0.11
SREBF1-201ENST00000261646 ACAA1P09110 424 aaPredicted RBP14.39□□□□□ -0.11
SREBF1-201ENST00000261646 KIR2DS4P43632 304 aa14.39□□□□□ -0.11
SREBF1-201ENST00000261646 KIR2DS1Q14954 304 aa14.39□□□□□ -0.11
SREBF1-201ENST00000261646 IQCJQ1A5X6 159 aa14.39□□□□□ -0.11
SREBF1-201ENST00000261646 ZNRF4Q8WWF5 429 aa14.39□□□□□ -0.11
SREBF1-201ENST00000261646 ADAT3Q96EY9 351 aaPredicted RBP14.39□□□□□ -0.11
SREBF1-201ENST00000261646 TCN2P20062 427 aa14.38□□□□□ -0.11
SREBF1-201ENST00000261646 TNFRSF4P43489 277 aa14.38□□□□□ -0.11
SREBF1-201ENST00000261646 PKIAP61925 76 aa14.38□□□□□ -0.11
SREBF1-201ENST00000261646 RDH5Q92781 318 aa14.38□□□□□ -0.11
SREBF1-201ENST00000261646 PCBD1P61457 104 aa14.38□□□□□ -0.11
SREBF1-201ENST00000261646 SHHQ15465 462 aa14.38□□□□□ -0.11
SREBF1-201ENST00000261646 NTNG2Q96CW9 530 aa14.38□□□□□ -0.11
SREBF1-201ENST00000261646 GPR87Q9BY21 358 aa14.38□□□□□ -0.11
SREBF1-201ENST00000261646 SLC26A1Q9H2B4 701 aa14.38□□□□□ -0.11
SREBF1-201ENST00000261646 DOK5Q9P104 306 aa14.38□□□□□ -0.11
SREBF1-201ENST00000261646 RNF150Q9ULK6 438 aa14.38□□□□□ -0.11
SREBF1-201ENST00000261646 ELOA3CA0A087WX78 387 aaPredicted RBP14.38□□□□□ -0.11
SREBF1-201ENST00000261646 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.38□□□□□ -0.11
SREBF1-201ENST00000261646 PLRG1O43660 514 aaKnown RBP14.38□□□□□ -0.11
SREBF1-201ENST00000261646 MT-CO2P00403 227 aa14.38□□□□□ -0.11
SREBF1-201ENST00000261646 NRASP01111 189 aa14.38□□□□□ -0.11
SREBF1-201ENST00000261646 SEC11BP0C7V7 166 aa14.38□□□□□ -0.11
SREBF1-201ENST00000261646 CD38P28907 300 aa14.38□□□□□ -0.11
SREBF1-201ENST00000261646 MGAT2Q10469 447 aa14.38□□□□□ -0.11
SREBF1-201ENST00000261646 IL13RA2Q14627 380 aa14.38□□□□□ -0.11
SREBF1-201ENST00000261646 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.38□□□□□ -0.11
SREBF1-201ENST00000261646 LINC01590Q5TEZ4 76 aa14.38□□□□□ -0.11
SREBF1-201ENST00000261646 ZNF574Q6ZN55 896 aaPredicted RBP14.38□□□□□ -0.11
SREBF1-201ENST00000261646 SLC25A26Q70HW3 274 aa14.38□□□□□ -0.11
SREBF1-201ENST00000261646 LYZL2Q7Z4W2 148 aa14.38□□□□□ -0.11
SREBF1-201ENST00000261646 ZNF439Q8NDP4 499 aa14.38□□□□□ -0.11
SREBF1-201ENST00000261646 PHOSPHO2Q8TCD6 241 aa14.38□□□□□ -0.11
SREBF1-201ENST00000261646 OR10C1Q96KK4 312 aa14.38□□□□□ -0.11
SREBF1-201ENST00000261646 LMAN1LQ9HAT1 526 aa14.38□□□□□ -0.11
SREBF1-201ENST00000261646 TRBV5-7A0A0A0MS05 114 aa14.37□□□□□ -0.11
SREBF1-201ENST00000261646 A0A1W2PP11 408 aa14.37□□□□□ -0.11
SREBF1-201ENST00000261646 MSGN1A6NI15 193 aa14.37□□□□□ -0.11
SREBF1-201ENST00000261646 PLPP3O14495 311 aa14.37□□□□□ -0.11
SREBF1-201ENST00000261646 HS3ST1O14792 307 aa14.37□□□□□ -0.11
SREBF1-201ENST00000261646 CT45A8P0DMV1 189 aa14.37□□□□□ -0.11
SREBF1-201ENST00000261646 CT45A9P0DMV2 189 aa14.37□□□□□ -0.11
SREBF1-201ENST00000261646 HLA-DOBP13765 273 aa14.37□□□□□ -0.11
SREBF1-201ENST00000261646 CT45A2Q5DJT8 189 aa14.37□□□□□ -0.11
SREBF1-201ENST00000261646 ARTNQ5T4W7 220 aa14.37□□□□□ -0.11
SREBF1-201ENST00000261646 DGAT2L6Q6ZPD8 337 aa14.37□□□□□ -0.11
SREBF1-201ENST00000261646 THOC3Q96J01 351 aaKnown RBP14.37□□□□□ -0.11
SREBF1-201ENST00000261646 CARHSP1Q9Y2V2 147 aaKnown RBP14.37□□□□□ -0.11
SREBF1-201ENST00000261646 V9GYS6 101 aa14.37□□□□□ -0.11
SREBF1-201ENST00000261646 CACNA1EQ15878 2313 aa14.37□□□□□ -0.11
SREBF1-201ENST00000261646 TRGC2P03986 189 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms