RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 EGLN1Q9GZT9 426 aa14.23□□□□□ -0.13
SDCBP-201ENST00000260130 OR10A2Q9H208 303 aa14.23□□□□□ -0.13
SDCBP-201ENST00000260130 PPIL3Q9H2H8 161 aaKnown RBP14.23□□□□□ -0.13
SDCBP-201ENST00000260130 DPAGT1Q9H3H5 408 aa14.23□□□□□ -0.13
SDCBP-201ENST00000260130 OPA3Q9H6K4 179 aa14.23□□□□□ -0.13
SDCBP-201ENST00000260130 SAP30LQ9HAJ7 183 aa14.23□□□□□ -0.13
SDCBP-201ENST00000260130 ZNF319Q9P2F9 582 aa14.23□□□□□ -0.13
SDCBP-201ENST00000260130 ING4Q9UNL4 249 aa14.23□□□□□ -0.13
SDCBP-201ENST00000260130 VWC2LB2RUY7 222 aa14.22□□□□□ -0.13
SDCBP-201ENST00000260130 J3QLW9 94 aa14.22□□□□□ -0.13
SDCBP-201ENST00000260130 LANCL1O43813 399 aa14.22□□□□□ -0.13
SDCBP-201ENST00000260130 LILRA1O75019 489 aa14.22□□□□□ -0.13
SDCBP-201ENST00000260130 SERPINA3P01011 423 aa14.22□□□□□ -0.13
SDCBP-201ENST00000260130 CD55P08174 381 aa14.22□□□□□ -0.13
SDCBP-201ENST00000260130 ZNF19P17023 458 aa14.22□□□□□ -0.13
SDCBP-201ENST00000260130 ACHEP22303 614 aa14.22□□□□□ -0.13
SDCBP-201ENST00000260130 GIFP27352 417 aa14.22□□□□□ -0.13
SDCBP-201ENST00000260130 EGR3Q06889 387 aa14.22□□□□□ -0.13
SDCBP-201ENST00000260130 CCDC58Q4VC31 144 aa14.22□□□□□ -0.13
SDCBP-201ENST00000260130 TMEM100Q9NV29 134 aa14.22□□□□□ -0.13
SDCBP-201ENST00000260130 NUBP2Q9Y5Y2 271 aa14.22□□□□□ -0.13
SDCBP-201ENST00000260130 A0A0A6YYJ9 748 aa14.22□□□□□ -0.13
SDCBP-201ENST00000260130 GGT3PA6NGU5 568 aa14.22□□□□□ -0.13
SDCBP-201ENST00000260130 CD300LBA8K4G0 201 aa14.22□□□□□ -0.13
SDCBP-201ENST00000260130 RAB3BP20337 219 aa14.22□□□□□ -0.13
SDCBP-201ENST00000260130 TNFSF4P23510 183 aa14.22□□□□□ -0.13
SDCBP-201ENST00000260130 RIDAP52758 137 aaKnown RBP14.22□□□□□ -0.13
SDCBP-201ENST00000260130 TNFAIP6P98066 277 aaPredicted RBP14.22□□□□□ -0.13
SDCBP-201ENST00000260130 PITPNAQ00169 270 aa14.22□□□□□ -0.13
SDCBP-201ENST00000260130 LAMTOR1Q6IAA8 161 aa14.22□□□□□ -0.13
SDCBP-201ENST00000260130 YIPF5Q969M3 257 aa14.22□□□□□ -0.13
SDCBP-201ENST00000260130 ELMOD3Q96FG2 381 aa14.22□□□□□ -0.13
SDCBP-201ENST00000260130 REEP6Q96HR9 211 aa14.22□□□□□ -0.13
SDCBP-201ENST00000260130 CHODLQ9H9P2 273 aa14.22□□□□□ -0.13
SDCBP-201ENST00000260130 COPZ2Q9P299 210 aa14.22□□□□□ -0.13
SDCBP-201ENST00000260130 A0A0G2JK05 382 aa14.21□□□□□ -0.13
SDCBP-201ENST00000260130 IGHV1-69-2A0A0G2JMI3 117 aa14.21□□□□□ -0.13
SDCBP-201ENST00000260130 TMEM269A0A1B0GVZ9 245 aa14.21□□□□□ -0.13
SDCBP-201ENST00000260130 C7orf66A4D0T2 115 aa14.21□□□□□ -0.13
SDCBP-201ENST00000260130 E9PI62 339 aa14.21□□□□□ -0.13
SDCBP-201ENST00000260130 AKR7A2O43488 359 aa14.21□□□□□ -0.13
SDCBP-201ENST00000260130 CDC14BO60729 498 aa14.21□□□□□ -0.13
SDCBP-201ENST00000260130 SC5DO75845 299 aa14.21□□□□□ -0.13
SDCBP-201ENST00000260130 OR10A3P58181 314 aa14.21□□□□□ -0.13
SDCBP-201ENST00000260130 ZNF85Q03923 595 aa14.21□□□□□ -0.13
SDCBP-201ENST00000260130 ACSM3Q53FZ2 586 aa14.21□□□□□ -0.13
SDCBP-201ENST00000260130 FAM27D1Q5T7N8 215 aa14.21□□□□□ -0.13
SDCBP-201ENST00000260130 DMKNQ6E0U4 476 aaPredicted RBP14.21□□□□□ -0.13
SDCBP-201ENST00000260130 ZNF782Q6ZMW2 699 aaPredicted RBP14.21□□□□□ -0.13
SDCBP-201ENST00000260130 KRT74Q7RTS7 529 aa14.21□□□□□ -0.13
SDCBP-201ENST00000260130 MAPK1IP1LQ8NDC0 245 aa14.21□□□□□ -0.13
SDCBP-201ENST00000260130 RGCCQ9H4X1 137 aa14.21□□□□□ -0.13
SDCBP-201ENST00000260130 RANBP3Q9H6Z4 567 aaPredicted RBP14.21□□□□□ -0.13
SDCBP-201ENST00000260130 TRAV1-2A0A0B4J238 106 aa14.2□□□□□ -0.14
SDCBP-201ENST00000260130 ACOD1A6NK06 481 aa14.2□□□□□ -0.14
SDCBP-201ENST00000260130 SMLR1H3BR10 107 aa14.2□□□□□ -0.14
SDCBP-201ENST00000260130 MAGEB4O15481 346 aaPredicted RBP14.2□□□□□ -0.14
SDCBP-201ENST00000260130 FAM3AP98173 230 aa14.2□□□□□ -0.14
SDCBP-201ENST00000260130 HSD17B12Q53GQ0 312 aa14.2□□□□□ -0.14
SDCBP-201ENST00000260130 BCL2L15Q5TBC7 163 aa14.2□□□□□ -0.14
SDCBP-201ENST00000260130 BAIAP2L2Q6UXY1 529 aa14.2□□□□□ -0.14
SDCBP-201ENST00000260130 SSX6Q7RTT6 188 aa14.2□□□□□ -0.14
SDCBP-201ENST00000260130 PHF21AQ96BD5 680 aa14.2□□□□□ -0.14
SDCBP-201ENST00000260130 PGLYRP3Q96LB9 341 aa14.2□□□□□ -0.14
SDCBP-201ENST00000260130 BPESC1Q9GZL8 116 aa14.2□□□□□ -0.14
SDCBP-201ENST00000260130 FAM206AQ9NX38 181 aa14.2□□□□□ -0.14
SDCBP-201ENST00000260130 ABRACLQ9P1F3 81 aa14.2□□□□□ -0.14
SDCBP-201ENST00000260130 IL19Q9UHD0 177 aa14.2□□□□□ -0.14
SDCBP-201ENST00000260130 MRM2Q9UI43 246 aaKnown RBP14.2□□□□□ -0.14
SDCBP-201ENST00000260130 A0A096LNT2 108 aa14.2□□□□□ -0.14
SDCBP-201ENST00000260130 A0A1B0GWJ7 208 aa14.2□□□□□ -0.14
SDCBP-201ENST00000260130 BTCP35070 178 aa14.2□□□□□ -0.14
SDCBP-201ENST00000260130 TMEM33P57088 247 aa14.2□□□□□ -0.14
SDCBP-201ENST00000260130 OR12D2P58182 307 aa14.2□□□□□ -0.14
SDCBP-201ENST00000260130 GFOD2Q3B7J2 385 aa14.2□□□□□ -0.14
SDCBP-201ENST00000260130 SPRNQ5BIV9 151 aa14.2□□□□□ -0.14
SDCBP-201ENST00000260130 BIVMQ86UB2 503 aa14.2□□□□□ -0.14
SDCBP-201ENST00000260130 TOMM5Q8N4H5 51 aa14.2□□□□□ -0.14
SDCBP-201ENST00000260130 OR8B12Q8NGG6 310 aa14.2□□□□□ -0.14
SDCBP-201ENST00000260130 ANGPTL6Q8NI99 470 aa14.2□□□□□ -0.14
SDCBP-201ENST00000260130 ABHD1Q96SE0 405 aa14.2□□□□□ -0.14
SDCBP-201ENST00000260130 C7orf50Q9BRJ6 194 aaKnown RBP14.2□□□□□ -0.14
SDCBP-201ENST00000260130 ZNF275Q9NSD4 429 aaPredicted RBP14.2□□□□□ -0.14
SDCBP-201ENST00000260130 H0YL77 283 aa14.19□□□□□ -0.14
SDCBP-201ENST00000260130 FABP7O15540 132 aa14.19□□□□□ -0.14
SDCBP-201ENST00000260130 MLNRO43193 412 aa14.19□□□□□ -0.14
SDCBP-201ENST00000260130 RP2O75695 350 aa14.19□□□□□ -0.14
SDCBP-201ENST00000260130 USF1P22415 310 aaPredicted RBP14.19□□□□□ -0.14
SDCBP-201ENST00000260130 MMP16P51512 607 aa14.19□□□□□ -0.14
SDCBP-201ENST00000260130 LOXL1Q08397 574 aaPredicted RBP14.19□□□□□ -0.14
SDCBP-201ENST00000260130 FCN2Q15485 313 aa14.19□□□□□ -0.14
SDCBP-201ENST00000260130 HFEQ30201 348 aa14.19□□□□□ -0.14
SDCBP-201ENST00000260130 CD276Q5ZPR3 534 aa14.19□□□□□ -0.14
SDCBP-201ENST00000260130 C9orf62Q8N4C0 152 aa14.19□□□□□ -0.14
SDCBP-201ENST00000260130 OR10AD1Q8NGE0 317 aa14.19□□□□□ -0.14
SDCBP-201ENST00000260130 SMR3AQ99954 134 aa14.19□□□□□ -0.14
SDCBP-201ENST00000260130 NUDT15Q9NV35 164 aa14.19□□□□□ -0.14
SDCBP-201ENST00000260130 TEP1Q99973 2627 aaKnown RBP14.19□□□□□ -0.14
SDCBP-201ENST00000260130 MED13LQ71F56 2210 aa14.19□□□□□ -0.14
SDCBP-201ENST00000260130 ARL6IP5O75915 188 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 437.4 ms