RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 SLC25A43Q8WUT9 341 aaPredicted RBP4.18□□□□□ -1.74
USP44-201ENST00000258499 RASL10BQ96S79 203 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 NRIP2Q9BQI9 281 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 RSRP1Q9BUV0 290 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 PECRQ9BY49 303 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 CRLF2Q9HC73 371 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 ZNF319Q9P2F9 582 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 ZNF107Q9UII5 783 aaPredicted RBP4.18□□□□□ -1.74
USP44-201ENST00000258499 KCNS2Q9ULS6 477 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 ST3GAL6Q9Y274 331 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 CACNA1GO43497 2377 aa4.17□□□□□ -1.74
USP44-201ENST00000258499 PTPRZ1P23471 2315 aaPredicted RBP4.17□□□□□ -1.74
USP44-201ENST00000258499 FANCMQ8IYD8 2048 aa4.17□□□□□ -1.74
USP44-201ENST00000258499 OBSL1O75147 1896 aa4.17□□□□□ -1.74
USP44-201ENST00000258499 A0A096LPE4 126 aa4.17□□□□□ -1.74
USP44-201ENST00000258499 A0A1B0GTI1 187 aa4.17□□□□□ -1.74
USP44-201ENST00000258499 A0A1W2PPZ6 126 aa4.17□□□□□ -1.74
USP44-201ENST00000258499 FTCDNL1E5RQL4 147 aa4.17□□□□□ -1.74
USP44-201ENST00000258499 CXCL13O43927 109 aa4.17□□□□□ -1.74
USP44-201ENST00000258499 DHRS3O75911 302 aa4.17□□□□□ -1.74
USP44-201ENST00000258499 ONECUT2O95948 504 aa4.17□□□□□ -1.74
USP44-201ENST00000258499 CST4P01036 141 aa4.17□□□□□ -1.74
USP44-201ENST00000258499 TK1P04183 234 aa4.17□□□□□ -1.74
USP44-201ENST00000258499 SRFP11831 508 aa4.17□□□□□ -1.74
USP44-201ENST00000258499 S100A2P29034 98 aa4.17□□□□□ -1.74
USP44-201ENST00000258499 LPAR6P43657 344 aa4.17□□□□□ -1.74
USP44-201ENST00000258499 P2RY4P51582 365 aa4.17□□□□□ -1.74
USP44-201ENST00000258499 MECP2P51608 486 aaKnown RBP4.17□□□□□ -1.74
USP44-201ENST00000258499 TMEM50BP56557 158 aa4.17□□□□□ -1.74
USP44-201ENST00000258499 CCL7P80098 99 aa4.17□□□□□ -1.74
USP44-201ENST00000258499 PNLIPRP3Q17RR3 467 aa4.17□□□□□ -1.74
USP44-201ENST00000258499 EIF2S3LQ2VIR3 472 aaKnown RBP4.17□□□□□ -1.74
USP44-201ENST00000258499 PDZD11Q5EBL8 140 aa4.17□□□□□ -1.74
USP44-201ENST00000258499 RHBDD2Q6NTF9 364 aa4.17□□□□□ -1.74
USP44-201ENST00000258499 ZNF774Q6NX45 483 aa4.17□□□□□ -1.74
USP44-201ENST00000258499 RPUSD3Q6P087 351 aaKnown RBP4.17□□□□□ -1.74
USP44-201ENST00000258499 IL34Q6ZMJ4 242 aa4.17□□□□□ -1.74
USP44-201ENST00000258499 SLC25A26Q70HW3 274 aa4.17□□□□□ -1.74
USP44-201ENST00000258499 RPS19BP1Q86WX3 136 aaKnown RBP4.17□□□□□ -1.74
USP44-201ENST00000258499 LGI3Q8N145 548 aa4.17□□□□□ -1.74
USP44-201ENST00000258499 FAM24BQ8N5W8 94 aa4.17□□□□□ -1.74
USP44-201ENST00000258499 SMRP1Q8NCR6 262 aa4.17□□□□□ -1.74
USP44-201ENST00000258499 OR2G3Q8NGZ4 309 aa4.17□□□□□ -1.74
USP44-201ENST00000258499 OR8U1Q8NH10 309 aa4.17□□□□□ -1.74
USP44-201ENST00000258499 SFT2D1Q8WV19 159 aa4.17□□□□□ -1.74
USP44-201ENST00000258499 PTX4Q96A99 478 aa4.17□□□□□ -1.74
USP44-201ENST00000258499 SGK3Q96BR1 496 aa4.17□□□□□ -1.74
USP44-201ENST00000258499 ZNF501Q96CX3 271 aaPredicted RBP4.17□□□□□ -1.74
USP44-201ENST00000258499 CYYR1Q96J86 154 aa4.17□□□□□ -1.74
USP44-201ENST00000258499 PIGQQ9BRB3 760 aa4.17□□□□□ -1.74
USP44-201ENST00000258499 AKIRIN1Q9H9L7 192 aaPredicted RBP4.17□□□□□ -1.74
USP44-201ENST00000258499 SPTBN2O15020 2390 aa4.17□□□□□ -1.74
USP44-201ENST00000258499 DNAJC13O75165 2243 aa4.17□□□□□ -1.74
USP44-201ENST00000258499 A0A1B0GTQ1 180 aa4.17□□□□□ -1.74
USP44-201ENST00000258499 FIGNL2A6NMB9 653 aa4.17□□□□□ -1.74
USP44-201ENST00000258499 TMEM14DPA8MWL7 114 aa4.17□□□□□ -1.74
USP44-201ENST00000258499 TAAR5O14804 337 aa4.17□□□□□ -1.74
USP44-201ENST00000258499 SSSCA1O60232 199 aa4.17□□□□□ -1.74
USP44-201ENST00000258499 NRASP01111 189 aa4.17□□□□□ -1.74
USP44-201ENST00000258499 NQO2P16083 231 aa4.17□□□□□ -1.74
USP44-201ENST00000258499 GDF1P27539 372 aa4.17□□□□□ -1.74
USP44-201ENST00000258499 CALCRP30988 508 aa4.17□□□□□ -1.74
USP44-201ENST00000258499 FHITP49789 147 aa4.17□□□□□ -1.74
USP44-201ENST00000258499 SSR4P51571 173 aa4.17□□□□□ -1.74
USP44-201ENST00000258499 ZNF133P52736 654 aaPredicted RBP4.17□□□□□ -1.74
USP44-201ENST00000258499 CARD18P57730 90 aa4.17□□□□□ -1.74
USP44-201ENST00000258499 GUK1Q16774 197 aa4.17□□□□□ -1.74
USP44-201ENST00000258499 PLPPR5Q32ZL2 321 aa4.17□□□□□ -1.74
USP44-201ENST00000258499 FAM166AQ6J272 317 aa4.17□□□□□ -1.74
USP44-201ENST00000258499 MRPL21Q7Z2W9 205 aaKnown RBP4.17□□□□□ -1.74
USP44-201ENST00000258499 LYZL2Q7Z4W2 148 aa4.17□□□□□ -1.74
USP44-201ENST00000258499 RABEPKQ7Z6M1 372 aa4.17□□□□□ -1.74
USP44-201ENST00000258499 LINC00518Q8N0U6 118 aa4.17□□□□□ -1.74
USP44-201ENST00000258499 OR5AS1Q8N127 324 aa4.17□□□□□ -1.74
USP44-201ENST00000258499 APCDD1LQ8NCL9 501 aa4.17□□□□□ -1.74
USP44-201ENST00000258499 PLPP5Q8NEB5 264 aa4.17□□□□□ -1.74
USP44-201ENST00000258499 OR51H1Q8NH63 302 aa4.17□□□□□ -1.74
USP44-201ENST00000258499 OR6X1Q8NH79 312 aa4.17□□□□□ -1.74
USP44-201ENST00000258499 UBALD1Q8TB05 177 aa4.17□□□□□ -1.74
USP44-201ENST00000258499 SHDQ96IW2 340 aa4.17□□□□□ -1.74
USP44-201ENST00000258499 CCDC74BQ96LY2 380 aa4.17□□□□□ -1.74
USP44-201ENST00000258499 ZNF285Q96NJ3 590 aa4.17□□□□□ -1.74
USP44-201ENST00000258499 CLCC1Q96S66 551 aa4.17□□□□□ -1.74
USP44-201ENST00000258499 GPHA2Q96T91 129 aa4.17□□□□□ -1.74
USP44-201ENST00000258499 RAB33BQ9H082 229 aa4.17□□□□□ -1.74
USP44-201ENST00000258499 NELFAQ9H3P2 528 aa4.17□□□□□ -1.74
USP44-201ENST00000258499 HDGFL3Q9Y3E1 203 aa4.17□□□□□ -1.74
USP44-201ENST00000258499 MMP24Q9Y5R2 645 aa4.17□□□□□ -1.74
USP44-201ENST00000258499 KPTNQ9Y664 436 aa4.17□□□□□ -1.74
USP44-201ENST00000258499 ESPL1Q14674 2120 aa4.17□□□□□ -1.74
USP44-201ENST00000258499 DOCK7Q96N67 2140 aa4.17□□□□□ -1.74
USP44-201ENST00000258499 ARPC4-TTLL3A0A0A6YYG9 625 aa4.17□□□□□ -1.74
USP44-201ENST00000258499 hCG_1809904A0A1W2PP81 198 aa4.17□□□□□ -1.74
USP44-201ENST00000258499 A0A1W2PR64 198 aa4.17□□□□□ -1.74
USP44-201ENST00000258499 A0A1W2PRV1 198 aa4.17□□□□□ -1.74
USP44-201ENST00000258499 A6NLC8 198 aa4.17□□□□□ -1.74
USP44-201ENST00000258499 DHRS7CA6NNS2 312 aa4.17□□□□□ -1.74
USP44-201ENST00000258499 ZNF814B7Z6K7 855 aa4.17□□□□□ -1.74
USP44-201ENST00000258499 E5RGE8 158 aa4.17□□□□□ -1.74
USP44-201ENST00000258499 HSD17B6O14756 317 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms