RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 RTN4RL2Q86UN3 420 aa11.81□□□□□ -0.52
PRPF38A-201ENST00000257181 NLKQ9UBE8 527 aa11.81□□□□□ -0.52
PRPF38A-201ENST00000257181 A0A1W2PS29 197 aa11.81□□□□□ -0.52
PRPF38A-201ENST00000257181 HMX3A6NHT5 357 aa11.81□□□□□ -0.52
PRPF38A-201ENST00000257181 PCSK4Q6UW60 755 aa11.81□□□□□ -0.52
PRPF38A-201ENST00000257181 SAXO1Q8IYX7 474 aa11.81□□□□□ -0.52
PRPF38A-201ENST00000257181 MUC15Q8N387 334 aa11.81□□□□□ -0.52
PRPF38A-201ENST00000257181 ZNF275Q9NSD4 429 aaPredicted RBP11.81□□□□□ -0.52
PRPF38A-201ENST00000257181 TRBV23-1A0A0A0MS06 115 aa11.81□□□□□ -0.52
PRPF38A-201ENST00000257181 M0R036 132 aa11.81□□□□□ -0.52
PRPF38A-201ENST00000257181 MGST3O14880 152 aa11.81□□□□□ -0.52
PRPF38A-201ENST00000257181 WISP3O95389 354 aaPredicted RBP11.81□□□□□ -0.52
PRPF38A-201ENST00000257181 IGHMP01871 453 aa11.81□□□□□ -0.52
PRPF38A-201ENST00000257181 ADRA2AP08913 450 aa11.81□□□□□ -0.52
PRPF38A-201ENST00000257181 MESP2Q0VG99 397 aa11.81□□□□□ -0.52
PRPF38A-201ENST00000257181 ZFP62Q8NB50 900 aaPredicted RBP11.81□□□□□ -0.52
PRPF38A-201ENST00000257181 FAM168AQ92567 244 aa11.81□□□□□ -0.52
PRPF38A-201ENST00000257181 PRR14Q9BWN1 585 aa11.81□□□□□ -0.52
PRPF38A-201ENST00000257181 IGKV3D-11A0A0A0MRZ8 115 aa11.8□□□□□ -0.52
PRPF38A-201ENST00000257181 ST8SIA3O43173 380 aa11.8□□□□□ -0.52
PRPF38A-201ENST00000257181 SHC1P29353 583 aa11.8□□□□□ -0.52
PRPF38A-201ENST00000257181 STAC2Q6ZMT1 411 aa11.8□□□□□ -0.52
PRPF38A-201ENST00000257181 TIMP4Q99727 224 aa11.8□□□□□ -0.52
PRPF38A-201ENST00000257181 GAPDHP04406 335 aaKnown RBP11.8□□□□□ -0.52
PRPF38A-201ENST00000257181 GLRXP35754 106 aa11.8□□□□□ -0.52
PRPF38A-201ENST00000257181 GDNFP39905 211 aa11.8□□□□□ -0.52
PRPF38A-201ENST00000257181 ZXDCQ2QGD7 858 aaPredicted RBP11.8□□□□□ -0.52
PRPF38A-201ENST00000257181 CBLN4Q9NTU7 201 aa11.8□□□□□ -0.52
PRPF38A-201ENST00000257181 TMPRSS2O15393 492 aa11.8□□□□□ -0.52
PRPF38A-201ENST00000257181 UPK1BO75841 260 aa11.8□□□□□ -0.52
PRPF38A-201ENST00000257181 CD1AP06126 327 aa11.8□□□□□ -0.52
PRPF38A-201ENST00000257181 NCS1P62166 190 aa11.8□□□□□ -0.52
PRPF38A-201ENST00000257181 PEA15Q15121 130 aa11.8□□□□□ -0.52
PRPF38A-201ENST00000257181 KDF1Q8NAX2 398 aaPredicted RBP11.8□□□□□ -0.52
PRPF38A-201ENST00000257181 OR10P1Q8NGE3 313 aa11.8□□□□□ -0.52
PRPF38A-201ENST00000257181 OR14K1Q8NGZ2 314 aa11.8□□□□□ -0.52
PRPF38A-201ENST00000257181 GNPNAT1Q96EK6 184 aaPredicted RBP11.8□□□□□ -0.52
PRPF38A-201ENST00000257181 EIF5A2Q9GZV4 153 aaKnown RBP11.8□□□□□ -0.52
PRPF38A-201ENST00000257181 OR51J1Q9H342 316 aa11.8□□□□□ -0.52
PRPF38A-201ENST00000257181 PURGQ9UJV8 347 aaKnown RBP11.8□□□□□ -0.52
PRPF38A-201ENST00000257181 ZNF785A8K8V0 405 aa11.8□□□□□ -0.52
PRPF38A-201ENST00000257181 TFP02787 698 aa11.8□□□□□ -0.52
PRPF38A-201ENST00000257181 NKX2-1P43699 371 aaPredicted RBP11.8□□□□□ -0.52
PRPF38A-201ENST00000257181 SELENOPP49908 381 aa11.8□□□□□ -0.52
PRPF38A-201ENST00000257181 KISS1Q15726 138 aa11.8□□□□□ -0.52
PRPF38A-201ENST00000257181 OLIG3Q7RTU3 272 aa11.8□□□□□ -0.52
PRPF38A-201ENST00000257181 FAM90A1Q86YD7 464 aa11.8□□□□□ -0.52
PRPF38A-201ENST00000257181 ZNF486Q96H40 463 aaPredicted RBP11.8□□□□□ -0.52
PRPF38A-201ENST00000257181 FAM212BQ9NTI7 297 aaPredicted RBP11.8□□□□□ -0.52
PRPF38A-201ENST00000257181 POM121CA8CG34 1229 aa11.8□□□□□ -0.52
PRPF38A-201ENST00000257181 F2RP25116 425 aa11.8□□□□□ -0.52
PRPF38A-201ENST00000257181 ID1P41134 155 aa11.8□□□□□ -0.52
PRPF38A-201ENST00000257181 TEX30Q5JUR7 227 aa11.8□□□□□ -0.52
PRPF38A-201ENST00000257181 APOOLQ6UXV4 268 aa11.8□□□□□ -0.52
PRPF38A-201ENST00000257181 OR10AD1Q8NGE0 317 aa11.8□□□□□ -0.52
PRPF38A-201ENST00000257181 GPX7Q96SL4 187 aaPredicted RBP11.8□□□□□ -0.52
PRPF38A-201ENST00000257181 ZNF385DQ9H6B1 395 aa11.8□□□□□ -0.52
PRPF38A-201ENST00000257181 LEUTXA8MZ59 168 aa11.79□□□□□ -0.52
PRPF38A-201ENST00000257181 RPA2P15927 270 aa11.79□□□□□ -0.52
PRPF38A-201ENST00000257181 ZNF708P17019 499 aa11.79□□□□□ -0.52
PRPF38A-201ENST00000257181 LRRC37A5PQ49AS3 106 aa11.79□□□□□ -0.52
PRPF38A-201ENST00000257181 STUMQ69YW2 141 aa11.79□□□□□ -0.52
PRPF38A-201ENST00000257181 TGIF2LYQ8IUE0 185 aa11.79□□□□□ -0.52
PRPF38A-201ENST00000257181 TGIF2LXQ8IUE1 241 aa11.79□□□□□ -0.52
PRPF38A-201ENST00000257181 OR8H3Q8N146 312 aa11.79□□□□□ -0.52
PRPF38A-201ENST00000257181 OR8G5Q8NG78 346 aa11.79□□□□□ -0.52
PRPF38A-201ENST00000257181 RNF133Q8WVZ7 376 aa11.79□□□□□ -0.52
PRPF38A-201ENST00000257181 MALSU1Q96EH3 234 aa11.79□□□□□ -0.52
PRPF38A-201ENST00000257181 PRDM14Q9GZV8 571 aa11.79□□□□□ -0.52
PRPF38A-201ENST00000257181 IFITM5A6NNB3 132 aa11.79□□□□□ -0.52
PRPF38A-201ENST00000257181 IGKV3-11P04433 115 aa11.79□□□□□ -0.52
PRPF38A-201ENST00000257181 UBE2G2P60604 165 aa11.79□□□□□ -0.52
PRPF38A-201ENST00000257181 ACSF3Q4G176 576 aaPredicted RBP11.79□□□□□ -0.52
PRPF38A-201ENST00000257181 CDCP2Q5VXM1 449 aa11.79□□□□□ -0.52
PRPF38A-201ENST00000257181 NTNG2Q96CW9 530 aa11.79□□□□□ -0.52
PRPF38A-201ENST00000257181 ARL6Q9H0F7 186 aa11.79□□□□□ -0.52
PRPF38A-201ENST00000257181 WIPI2Q9Y4P8 454 aa11.79□□□□□ -0.52
PRPF38A-201ENST00000257181 M0R1X1 148 aa11.79□□□□□ -0.52
PRPF38A-201ENST00000257181 SS18L1O75177 396 aaPredicted RBP11.79□□□□□ -0.52
PRPF38A-201ENST00000257181 ATXN7L3Q14CW9 347 aaPredicted RBP11.79□□□□□ -0.52
PRPF38A-201ENST00000257181 CDONQ4KMG0 1287 aa11.79□□□□□ -0.52
PRPF38A-201ENST00000257181 CBLN3Q6UW01 205 aa11.79□□□□□ -0.52
PRPF38A-201ENST00000257181 SEZ6L2Q6UXD5 910 aa11.79□□□□□ -0.52
PRPF38A-201ENST00000257181 COMTD1Q86VU5 262 aa11.79□□□□□ -0.52
PRPF38A-201ENST00000257181 TMEM229BQ8NBD8 167 aa11.79□□□□□ -0.52
PRPF38A-201ENST00000257181 DYNLRB2Q8TF09 96 aa11.79□□□□□ -0.52
PRPF38A-201ENST00000257181 UBE2FQ969M7 185 aa11.79□□□□□ -0.52
PRPF38A-201ENST00000257181 SNX22Q96L94 193 aa11.79□□□□□ -0.52
PRPF38A-201ENST00000257181 ZNF714Q96N38 554 aa11.79□□□□□ -0.52
PRPF38A-201ENST00000257181 ZNF107Q9UII5 783 aaPredicted RBP11.79□□□□□ -0.52
PRPF38A-201ENST00000257181 SNRPBP14678 240 aaKnown RBP11.79□□□□□ -0.52
PRPF38A-201ENST00000257181 HMGN3Q15651 99 aa11.79□□□□□ -0.52
PRPF38A-201ENST00000257181 C3AR1Q16581 482 aa11.79□□□□□ -0.52
PRPF38A-201ENST00000257181 ACOT6Q3I5F7 207 aaPredicted RBP11.79□□□□□ -0.52
PRPF38A-201ENST00000257181 Q56UQ5 140 aa11.79□□□□□ -0.52
PRPF38A-201ENST00000257181 SLC25A53Q5H9E4 307 aa11.79□□□□□ -0.52
PRPF38A-201ENST00000257181 OR52L2PQ8NGH6 319 aa11.79□□□□□ -0.52
PRPF38A-201ENST00000257181 GINS3Q9BRX5 216 aa11.79□□□□□ -0.52
PRPF38A-201ENST00000257181 ZNF2Q9BSG1 426 aaPredicted RBP11.79□□□□□ -0.52
PRPF38A-201ENST00000257181 FABP7O15540 132 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms