RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 GFI1Q99684 422 aa10.48□□□□□ -0.73
CCNA1-201ENST00000255465 GPA33Q99795 319 aa10.48□□□□□ -0.73
CCNA1-201ENST00000255465 GINS3Q9BRX5 216 aa10.48□□□□□ -0.73
CCNA1-201ENST00000255465 EBPLQ9BY08 206 aa10.48□□□□□ -0.73
CCNA1-201ENST00000255465 NOX4Q9NPH5 578 aa10.48□□□□□ -0.73
CCNA1-201ENST00000255465 OR2S2Q9NQN1 319 aa10.48□□□□□ -0.73
CCNA1-201ENST00000255465 FBXO34Q9NWN3 711 aa10.48□□□□□ -0.73
CCNA1-201ENST00000255465 CDC42EP3Q9UKI2 254 aa10.48□□□□□ -0.73
CCNA1-201ENST00000255465 RNF150Q9ULK6 438 aa10.48□□□□□ -0.73
CCNA1-201ENST00000255465 SLC45A2Q9UMX9 530 aa10.48□□□□□ -0.73
CCNA1-201ENST00000255465 SOCS6O14544 535 aa10.47□□□□□ -0.73
CCNA1-201ENST00000255465 ST6GAL1P15907 406 aa10.47□□□□□ -0.73
CCNA1-201ENST00000255465 GLRA1P23415 457 aa10.47□□□□□ -0.73
CCNA1-201ENST00000255465 MC4RP32245 332 aa10.47□□□□□ -0.73
CCNA1-201ENST00000255465 CAMLGP49069 296 aa10.47□□□□□ -0.73
CCNA1-201ENST00000255465 RAC3P60763 192 aa10.47□□□□□ -0.73
CCNA1-201ENST00000255465 UBE2NP61088 152 aaKnown RBP10.47□□□□□ -0.73
CCNA1-201ENST00000255465 C9orf135Q5VTT2 229 aa10.47□□□□□ -0.73
CCNA1-201ENST00000255465 COLCA1Q6ZS62 124 aa10.47□□□□□ -0.73
CCNA1-201ENST00000255465 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.47□□□□□ -0.73
CCNA1-201ENST00000255465 FAM220AQ7Z4H9 259 aa10.47□□□□□ -0.73
CCNA1-201ENST00000255465 C20orf196Q8IYI0 205 aa10.47□□□□□ -0.73
CCNA1-201ENST00000255465 ZNF615Q8N8J6 731 aa10.47□□□□□ -0.73
CCNA1-201ENST00000255465 WFDC12Q8WWY7 111 aa10.47□□□□□ -0.73
CCNA1-201ENST00000255465 P4HTMQ9NXG6 502 aa10.47□□□□□ -0.73
CCNA1-201ENST00000255465 NUP214P35658 2090 aaPredicted RBP10.47□□□□□ -0.73
CCNA1-201ENST00000255465 UNC13CQ8NB66 2214 aa10.47□□□□□ -0.73
CCNA1-201ENST00000255465 BORCS7-ASMTA0A0B4J1R7 106 aa10.47□□□□□ -0.73
CCNA1-201ENST00000255465 GJE1A6NN92 205 aa10.47□□□□□ -0.73
CCNA1-201ENST00000255465 ZNF727A8MUV8 499 aa10.47□□□□□ -0.73
CCNA1-201ENST00000255465 EEF1E1-BLOC1S5C9J1V9 151 aa10.47□□□□□ -0.73
CCNA1-201ENST00000255465 H0YIZ8 118 aa10.47□□□□□ -0.73
CCNA1-201ENST00000255465 AMY2AP04746 511 aa10.47□□□□□ -0.73
CCNA1-201ENST00000255465 MMP7P09237 267 aaPredicted RBP10.47□□□□□ -0.73
CCNA1-201ENST00000255465 AK4P27144 223 aaPredicted RBP10.47□□□□□ -0.73
CCNA1-201ENST00000255465 ACAA2P42765 397 aaKnown RBP10.47□□□□□ -0.73
CCNA1-201ENST00000255465 SIRPAP78324 504 aa10.47□□□□□ -0.73
CCNA1-201ENST00000255465 ZNF85Q03923 595 aa10.47□□□□□ -0.73
CCNA1-201ENST00000255465 RBPJQ06330 500 aa10.47□□□□□ -0.73
CCNA1-201ENST00000255465 PMS2P11Q13670 270 aa10.47□□□□□ -0.73
CCNA1-201ENST00000255465 NXPE4Q6UWF7 544 aa10.47□□□□□ -0.73
CCNA1-201ENST00000255465 ZNF429Q86V71 674 aa10.47□□□□□ -0.73
CCNA1-201ENST00000255465 OR4B1Q8NGF8 309 aa10.47□□□□□ -0.73
CCNA1-201ENST00000255465 THAP3Q8WTV1 239 aaPredicted RBP10.47□□□□□ -0.73
CCNA1-201ENST00000255465 C11orf40Q8WZ69 217 aa10.47□□□□□ -0.73
CCNA1-201ENST00000255465 MOAP1Q96BY2 351 aa10.47□□□□□ -0.73
CCNA1-201ENST00000255465 NEURL3Q96EH8 262 aa10.47□□□□□ -0.73
CCNA1-201ENST00000255465 CIB3Q96Q77 187 aaPredicted RBP10.47□□□□□ -0.73
CCNA1-201ENST00000255465 OR11A1Q9GZK7 315 aa10.47□□□□□ -0.73
CCNA1-201ENST00000255465 HIPK2Q9H2X6 1198 aa10.47□□□□□ -0.73
CCNA1-201ENST00000255465 SPEGQ15772 3267 aa10.46□□□□□ -0.73
CCNA1-201ENST00000255465 LY6G6EA0A0G2JKS1 128 aa10.46□□□□□ -0.74
CCNA1-201ENST00000255465 AQP7O14520 342 aa10.46□□□□□ -0.74
CCNA1-201ENST00000255465 KLF4O43474 513 aa10.46□□□□□ -0.74
CCNA1-201ENST00000255465 FCMRO60667 390 aa10.46□□□□□ -0.74
CCNA1-201ENST00000255465 OR6A2O95222 327 aa10.46□□□□□ -0.74
CCNA1-201ENST00000255465 MBPP02686 304 aaPredicted RBP10.46□□□□□ -0.74
CCNA1-201ENST00000255465 ANXA4P09525 319 aaPredicted RBP10.46□□□□□ -0.74
CCNA1-201ENST00000255465 OR13C7P0DN81 318 aa10.46□□□□□ -0.74
CCNA1-201ENST00000255465 MYF5P13349 255 aa10.46□□□□□ -0.74
CCNA1-201ENST00000255465 PYCR1P32322 319 aa10.46□□□□□ -0.74
CCNA1-201ENST00000255465 CDKN1CP49918 316 aaPredicted RBP10.46□□□□□ -0.74
CCNA1-201ENST00000255465 HLA-DRB3P79483 266 aa10.46□□□□□ -0.74
CCNA1-201ENST00000255465 IL24Q13007 206 aa10.46□□□□□ -0.74
CCNA1-201ENST00000255465 NR0B2Q15466 257 aa10.46□□□□□ -0.74
CCNA1-201ENST00000255465 PHF19Q5T6S3 580 aa10.46□□□□□ -0.74
CCNA1-201ENST00000255465 CLEC18BQ6UXF7 455 aa10.46□□□□□ -0.74
CCNA1-201ENST00000255465 KISS1RQ969F8 398 aaPredicted RBP10.46□□□□□ -0.74
CCNA1-201ENST00000255465 BTF3L4Q96K17 158 aa10.46□□□□□ -0.74
CCNA1-201ENST00000255465 TBX15Q96SF7 602 aa10.46□□□□□ -0.74
CCNA1-201ENST00000255465 CRLS1Q9UJA2 301 aa10.46□□□□□ -0.74
CCNA1-201ENST00000255465 U3KQA8 63 aa10.46□□□□□ -0.74
CCNA1-201ENST00000255465 TRBV5-4A0A0C4DH59 114 aa10.45□□□□□ -0.74
CCNA1-201ENST00000255465 RBFOX3A6NFN3 312 aa10.45□□□□□ -0.74
CCNA1-201ENST00000255465 ALOX12BO75342 701 aa10.45□□□□□ -0.74
CCNA1-201ENST00000255465 SRP19P09132 144 aaKnown RBP10.45□□□□□ -0.74
CCNA1-201ENST00000255465 FTH1P19P0C7X4 201 aa10.45□□□□□ -0.74
CCNA1-201ENST00000255465 PRSS56P0CW18 603 aa10.45□□□□□ -0.74
CCNA1-201ENST00000255465 TIA1P31483 386 aaKnown RBP eCLIP10.45□□□□□ -0.74
CCNA1-201ENST00000255465 MC5RP33032 325 aa10.45□□□□□ -0.74
CCNA1-201ENST00000255465 GDF5P43026 501 aa10.45□□□□□ -0.74
CCNA1-201ENST00000255465 GPR4P46093 362 aa10.45□□□□□ -0.74
CCNA1-201ENST00000255465 RAB28P51157 221 aa10.45□□□□□ -0.74
CCNA1-201ENST00000255465 ELLP55199 621 aaPredicted RBP10.45□□□□□ -0.74
CCNA1-201ENST00000255465 FAM3BP58499 235 aaPredicted RBP10.45□□□□□ -0.74
CCNA1-201ENST00000255465 COL10A1Q03692 680 aa10.45□□□□□ -0.74
CCNA1-201ENST00000255465 PPP1R1AQ13522 171 aa10.45□□□□□ -0.74
CCNA1-201ENST00000255465 PIN1Q13526 163 aaPredicted RBP10.45□□□□□ -0.74
CCNA1-201ENST00000255465 LYPLAL1Q5VWZ2 237 aa10.45□□□□□ -0.74
CCNA1-201ENST00000255465 PRR27Q6MZM9 219 aa10.45□□□□□ -0.74
CCNA1-201ENST00000255465 ZNF547Q8IVP9 402 aa10.45□□□□□ -0.74
CCNA1-201ENST00000255465 NXPE1Q8N323 547 aa10.45□□□□□ -0.74
CCNA1-201ENST00000255465 SLC38A5Q8WUX1 472 aa10.45□□□□□ -0.74
CCNA1-201ENST00000255465 C2orf50Q96LR7 162 aa10.45□□□□□ -0.74
CCNA1-201ENST00000255465 CLEC5AQ9NY25 188 aa10.45□□□□□ -0.74
CCNA1-201ENST00000255465 PLA2G2EQ9NZK7 142 aa10.45□□□□□ -0.74
CCNA1-201ENST00000255465 TAAR2Q9P1P5 351 aa10.45□□□□□ -0.74
CCNA1-201ENST00000255465 KIAA1456Q9P272 454 aa10.45□□□□□ -0.74
CCNA1-201ENST00000255465 SH2B3Q9UQQ2 575 aa10.45□□□□□ -0.74
CCNA1-201ENST00000255465 CCDC88CQ9P219 2028 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms