RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 PRR18Q8N4B5 295 aa10.53□□□□□ -0.72
USHBP1-201ENST00000252597 UBALD1Q8TB05 177 aa10.53□□□□□ -0.72
USHBP1-201ENST00000252597 RTN4IP1Q8WWV3 396 aaPredicted RBP10.53□□□□□ -0.72
USHBP1-201ENST00000252597 LIPHQ8WWY8 451 aa10.53□□□□□ -0.72
USHBP1-201ENST00000252597 GNRHR2Q96P88 292 aa10.53□□□□□ -0.72
USHBP1-201ENST00000252597 KCNK17Q96T54 332 aa10.53□□□□□ -0.72
USHBP1-201ENST00000252597 SLC5A7Q9GZV3 580 aa10.53□□□□□ -0.72
USHBP1-201ENST00000252597 FAM212BQ9NTI7 297 aaPredicted RBP10.53□□□□□ -0.72
USHBP1-201ENST00000252597 MCTS1Q9ULC4 181 aaKnown RBP10.53□□□□□ -0.72
USHBP1-201ENST00000252597 DNAJC13O75165 2243 aa10.52□□□□□ -0.72
USHBP1-201ENST00000252597 WRBO00258 174 aa10.52□□□□□ -0.73
USHBP1-201ENST00000252597 TUBG1P23258 451 aa10.52□□□□□ -0.73
USHBP1-201ENST00000252597 FPR2P25090 351 aa10.52□□□□□ -0.73
USHBP1-201ENST00000252597 IGLV3-21P80748 117 aaPredicted RBP10.52□□□□□ -0.73
USHBP1-201ENST00000252597 PPA1Q15181 289 aa10.52□□□□□ -0.73
USHBP1-201ENST00000252597 SOHLH1Q5JUK2 328 aa10.52□□□□□ -0.73
USHBP1-201ENST00000252597 IL34Q6ZMJ4 242 aa10.52□□□□□ -0.73
USHBP1-201ENST00000252597 ARRDC1Q8N5I2 433 aa10.52□□□□□ -0.73
USHBP1-201ENST00000252597 ABHD14AQ9BUJ0 271 aa10.52□□□□□ -0.73
USHBP1-201ENST00000252597 FAM24AA6NFZ4 105 aa10.52□□□□□ -0.73
USHBP1-201ENST00000252597 CD79AP11912 226 aa10.52□□□□□ -0.73
USHBP1-201ENST00000252597 GSK3AP49840 483 aa10.52□□□□□ -0.73
USHBP1-201ENST00000252597 PHF19Q5T6S3 580 aa10.52□□□□□ -0.73
USHBP1-201ENST00000252597 ZNF343Q6P1L6 599 aa10.52□□□□□ -0.73
USHBP1-201ENST00000252597 SLC22A25Q6T423 547 aa10.52□□□□□ -0.73
USHBP1-201ENST00000252597 SUMF2Q8NBJ7 301 aa10.52□□□□□ -0.73
USHBP1-201ENST00000252597 OR14K1Q8NGZ2 314 aa10.52□□□□□ -0.73
USHBP1-201ENST00000252597 ADAMTS17Q8TE56 1095 aa10.52□□□□□ -0.73
USHBP1-201ENST00000252597 CCNL2Q96S94 520 aaPredicted RBP10.52□□□□□ -0.73
USHBP1-201ENST00000252597 MMP17Q9ULZ9 603 aa10.52□□□□□ -0.73
USHBP1-201ENST00000252597 SLC7A11Q9UPY5 501 aa10.52□□□□□ -0.73
USHBP1-201ENST00000252597 R4GN57 208 aa10.52□□□□□ -0.73
USHBP1-201ENST00000252597 IGKV1-9A0A0C4DH69 117 aa10.51□□□□□ -0.73
USHBP1-201ENST00000252597 COLCA2A8K830 154 aa10.51□□□□□ -0.73
USHBP1-201ENST00000252597 TMEM14DPA8MWL7 114 aa10.51□□□□□ -0.73
USHBP1-201ENST00000252597 C3orf80F5H4A9 247 aa10.51□□□□□ -0.73
USHBP1-201ENST00000252597 FGF16O43320 207 aa10.51□□□□□ -0.73
USHBP1-201ENST00000252597 ZNF728P0DKX0 622 aa10.51□□□□□ -0.73
USHBP1-201ENST00000252597 GNRHRP30968 328 aa10.51□□□□□ -0.73
USHBP1-201ENST00000252597 TAS2R46P59540 309 aa10.51□□□□□ -0.73
USHBP1-201ENST00000252597 HERV-K104P61576 105 aa10.51□□□□□ -0.73
USHBP1-201ENST00000252597 HIST2H3AQ71DI3 136 aa10.51□□□□□ -0.73
USHBP1-201ENST00000252597 TMEM123Q8N131 208 aa10.51□□□□□ -0.73
USHBP1-201ENST00000252597 PIGCQ92535 297 aa10.51□□□□□ -0.73
USHBP1-201ENST00000252597 OR6C1Q96RD1 312 aa10.51□□□□□ -0.73
USHBP1-201ENST00000252597 DEFB126Q9BYW3 111 aa10.51□□□□□ -0.73
USHBP1-201ENST00000252597 AKIRIN1Q9H9L7 192 aaPredicted RBP10.51□□□□□ -0.73
USHBP1-201ENST00000252597 GSN-AS1Q9NRJ2 163 aa10.51□□□□□ -0.73
USHBP1-201ENST00000252597 UBE2J1Q9Y385 318 aaPredicted RBP10.51□□□□□ -0.73
USHBP1-201ENST00000252597 NBASA2RRP1 2371 aa10.51□□□□□ -0.73
USHBP1-201ENST00000252597 NCOA6Q14686 2063 aaPredicted RBP10.51□□□□□ -0.73
USHBP1-201ENST00000252597 DENND4AQ7Z401 1863 aa10.51□□□□□ -0.73
USHBP1-201ENST00000252597 HSPB2A8KAH6 182 aa10.51□□□□□ -0.73
USHBP1-201ENST00000252597 NPIPA2E9PIF3 369 aa10.51□□□□□ -0.73
USHBP1-201ENST00000252597 NPIPA3F8WFD2 350 aa10.51□□□□□ -0.73
USHBP1-201ENST00000252597 TLX3O43711 291 aaPredicted RBP10.51□□□□□ -0.73
USHBP1-201ENST00000252597 OR2C1O95371 312 aa10.51□□□□□ -0.73
USHBP1-201ENST00000252597 CST4P01036 141 aa10.51□□□□□ -0.73
USHBP1-201ENST00000252597 CELA2AP08217 269 aa10.51□□□□□ -0.73
USHBP1-201ENST00000252597 GSTP1P09211 210 aaKnown RBP10.51□□□□□ -0.73
USHBP1-201ENST00000252597 ZNF16P17020 682 aaPredicted RBP10.51□□□□□ -0.73
USHBP1-201ENST00000252597 GLP1RP43220 463 aa10.51□□□□□ -0.73
USHBP1-201ENST00000252597 CSNK1A1P48729 337 aa10.51□□□□□ -0.73
USHBP1-201ENST00000252597 DVL1P1P54792 670 aaPredicted RBP10.51□□□□□ -0.73
USHBP1-201ENST00000252597 DCAF7P61962 342 aa10.51□□□□□ -0.73
USHBP1-201ENST00000252597 HSPB2Q16082 182 aa10.51□□□□□ -0.73
USHBP1-201ENST00000252597 MYPOPQ86VE0 399 aaPredicted RBP10.51□□□□□ -0.73
USHBP1-201ENST00000252597 OR5T1Q8NG75 326 aa10.51□□□□□ -0.73
USHBP1-201ENST00000252597 TCTEX1D2Q8WW35 142 aa10.51□□□□□ -0.73
USHBP1-201ENST00000252597 UCN2Q96RP3 112 aa10.51□□□□□ -0.73
USHBP1-201ENST00000252597 PIGQQ9BRB3 760 aa10.51□□□□□ -0.73
USHBP1-201ENST00000252597 PECRQ9BY49 303 aa10.51□□□□□ -0.73
USHBP1-201ENST00000252597 NELFAQ9H3P2 528 aa10.51□□□□□ -0.73
USHBP1-201ENST00000252597 FSCN3Q9NQT6 498 aa10.51□□□□□ -0.73
USHBP1-201ENST00000252597 LUZP4Q9P127 313 aa10.51□□□□□ -0.73
USHBP1-201ENST00000252597 MMACHCQ9Y4U1 282 aa10.51□□□□□ -0.73
USHBP1-201ENST00000252597 EFNA2O43921 213 aa10.51□□□□□ -0.73
USHBP1-201ENST00000252597 NDUFS6O75380 124 aaKnown RBP10.51□□□□□ -0.73
USHBP1-201ENST00000252597 HOXC4P09017 264 aaPredicted RBP10.51□□□□□ -0.73
USHBP1-201ENST00000252597 LTBRP36941 435 aa10.51□□□□□ -0.73
USHBP1-201ENST00000252597 VAMP2P63027 116 aa10.51□□□□□ -0.73
USHBP1-201ENST00000252597 MRPS21P82921 87 aaKnown RBP10.51□□□□□ -0.73
USHBP1-201ENST00000252597 UBE2V2Q15819 145 aa10.51□□□□□ -0.73
USHBP1-201ENST00000252597 PIGYQ3MUY2 71 aa10.51□□□□□ -0.73
USHBP1-201ENST00000252597 AADACL3Q5VUY0 350 aa10.51□□□□□ -0.73
USHBP1-201ENST00000252597 OR52M1Q8NGK5 317 aa10.51□□□□□ -0.73
USHBP1-201ENST00000252597 LMAN1LQ9HAT1 526 aa10.51□□□□□ -0.73
USHBP1-201ENST00000252597 ICE1Q9Y2F5 2266 aa10.51□□□□□ -0.73
USHBP1-201ENST00000252597 KIAA2026Q5HYC2 2103 aa10.51□□□□□ -0.73
USHBP1-201ENST00000252597 LIPT2A6NK58 231 aa10.5□□□□□ -0.73
USHBP1-201ENST00000252597 JTBO76095 146 aa10.5□□□□□ -0.73
USHBP1-201ENST00000252597 S100A2P29034 98 aa10.5□□□□□ -0.73
USHBP1-201ENST00000252597 SULT1A1P50225 295 aa10.5□□□□□ -0.73
USHBP1-201ENST00000252597 RAB2AP61019 212 aa10.5□□□□□ -0.73
USHBP1-201ENST00000252597 ACER2Q5QJU3 275 aa10.5□□□□□ -0.73
USHBP1-201ENST00000252597 SLC38A9Q8NBW4 561 aa10.5□□□□□ -0.73
USHBP1-201ENST00000252597 ASB13Q8WXK3 278 aa10.5□□□□□ -0.73
USHBP1-201ENST00000252597 EMG1Q92979 244 aaKnown RBP10.5□□□□□ -0.73
USHBP1-201ENST00000252597 A0A1B0GX78 115 aa10.5□□□□□ -0.73
USHBP1-201ENST00000252597 FTCDNL1E5RQL4 147 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms