RNA–Protein interactions for RNA: ENST00000250489.8

TMEM55B-201, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-201ENST00000250489 ATP1B3P54709 279 aa21.81■■□□□ 1.08
TMEM55B-201ENST00000250489 RAB14P61106 215 aa21.81■■□□□ 1.08
TMEM55B-201ENST00000250489 TMEM128Q5BJH2 165 aa21.81■■□□□ 1.08
TMEM55B-201ENST00000250489 AADACL3Q5VUY0 350 aa21.81■■□□□ 1.08
TMEM55B-201ENST00000250489 PLCXD3Q63HM9 321 aa21.81■■□□□ 1.08
TMEM55B-201ENST00000250489 TMEM65Q6PI78 240 aa21.81■■□□□ 1.08
TMEM55B-201ENST00000250489 PIGCQ92535 297 aa21.81■■□□□ 1.08
TMEM55B-201ENST00000250489 SEC22AQ96IW7 307 aa21.81■■□□□ 1.08
TMEM55B-201ENST00000250489 SCGB3A2Q96PL1 93 aa21.81■■□□□ 1.08
TMEM55B-201ENST00000250489 PPA2Q9H2U2 334 aa21.81■■□□□ 1.08
TMEM55B-201ENST00000250489 IGKV1-12A0A0C4DH73 117 aa21.81■■□□□ 1.08
TMEM55B-201ENST00000250489 DBX1A6NMT0 343 aa21.81■■□□□ 1.08
TMEM55B-201ENST00000250489 IGKV1D-12P01611 117 aa21.81■■□□□ 1.08
TMEM55B-201ENST00000250489 AGTR1P30556 359 aa21.81■■□□□ 1.08
TMEM55B-201ENST00000250489 TAF9Q16594 264 aa21.81■■□□□ 1.08
TMEM55B-201ENST00000250489 CHRFAM7AQ494W8 412 aa21.81■■□□□ 1.08
TMEM55B-201ENST00000250489 KCTD9Q7L273 389 aa21.81■■□□□ 1.08
TMEM55B-201ENST00000250489 OVCH2Q7RTZ1 564 aa21.81■■□□□ 1.08
TMEM55B-201ENST00000250489 TECTBQ96PL2 329 aa21.81■■□□□ 1.08
TMEM55B-201ENST00000250489 ZNF701Q9NV72 531 aaPredicted RBP21.81■■□□□ 1.08
TMEM55B-201ENST00000250489 HSF4Q9ULV5 492 aa21.81■■□□□ 1.08
TMEM55B-201ENST00000250489 IGKV1D-8A0A087WSZ0 117 aa21.8■■□□□ 1.08
TMEM55B-201ENST00000250489 ZNF503-AS2A6NEH8 195 aa21.8■■□□□ 1.08
TMEM55B-201ENST00000250489 TUBAL3A6NHL2 446 aa21.8■■□□□ 1.08
TMEM55B-201ENST00000250489 CD82P27701 267 aa21.8■■□□□ 1.08
TMEM55B-201ENST00000250489 RPUSD3Q6P087 351 aaKnown RBP21.8■■□□□ 1.08
TMEM55B-201ENST00000250489 NUFIP2Q7Z417 695 aaKnown RBP21.8■■□□□ 1.08
TMEM55B-201ENST00000250489 PXT1Q8NFP0 134 aa21.8■■□□□ 1.08
TMEM55B-201ENST00000250489 HDHD3Q9BSH5 251 aaPredicted RBP21.8■■□□□ 1.08
TMEM55B-201ENST00000250489 PARD6AQ9NPB6 346 aa21.8■■□□□ 1.08
TMEM55B-201ENST00000250489 IL36GQ9NZH8 169 aa21.8■■□□□ 1.08
TMEM55B-201ENST00000250489 COMMD9Q9P000 198 aa21.8■■□□□ 1.08
TMEM55B-201ENST00000250489 MSTNO14793 375 aa21.79■■□□□ 1.08
TMEM55B-201ENST00000250489 COX5BP10606 129 aa21.79■■□□□ 1.08
TMEM55B-201ENST00000250489 SLC25A4P12235 298 aa21.79■■□□□ 1.08
TMEM55B-201ENST00000250489 CAMK2BQ13554 666 aa21.79■■□□□ 1.08
TMEM55B-201ENST00000250489 GSG1LQ6UXU4 331 aa21.79■■□□□ 1.08
TMEM55B-201ENST00000250489 ZNF546Q86UE3 836 aa21.79■■□□□ 1.08
TMEM55B-201ENST00000250489 MCEMP1Q8IX19 187 aa21.79■■□□□ 1.08
TMEM55B-201ENST00000250489 RTBDNQ9BSG5 229 aaPredicted RBP21.79■■□□□ 1.08
TMEM55B-201ENST00000250489 DEFB127Q9H1M4 99 aa21.79■■□□□ 1.08
TMEM55B-201ENST00000250489 ZNF581Q9P0T4 197 aa21.79■■□□□ 1.08
TMEM55B-201ENST00000250489 B3GALNT1O75752 331 aa21.79■■□□□ 1.08
TMEM55B-201ENST00000250489 SOX8P57073 446 aa21.79■■□□□ 1.08
TMEM55B-201ENST00000250489 ARG2P78540 354 aa21.79■■□□□ 1.08
TMEM55B-201ENST00000250489 PDZK1IP1Q13113 114 aa21.79■■□□□ 1.08
TMEM55B-201ENST00000250489 ZNF766Q5HY98 468 aa21.79■■□□□ 1.08
TMEM55B-201ENST00000250489 C11orf87Q6NUJ2 197 aa21.79■■□□□ 1.08
TMEM55B-201ENST00000250489 DEFB124Q8NES8 71 aa21.79■■□□□ 1.08
TMEM55B-201ENST00000250489 FAM25EA8MYX2 175 aa21.78■■□□□ 1.08
TMEM55B-201ENST00000250489 BAMBIQ13145 260 aa21.78■■□□□ 1.08
TMEM55B-201ENST00000250489 PPP1R1CQ8WVI7 109 aa21.78■■□□□ 1.08
TMEM55B-201ENST00000250489 FAAP24Q9BTP7 215 aa21.78■■□□□ 1.08
TMEM55B-201ENST00000250489 FREM1Q5H8C1 2179 aa21.78■■□□□ 1.08
TMEM55B-201ENST00000250489 SFT2D2O95562 160 aa21.78■■□□□ 1.08
TMEM55B-201ENST00000250489 PI3P19957 117 aa21.78■■□□□ 1.08
TMEM55B-201ENST00000250489 CCNOP22674 350 aa21.78■■□□□ 1.08
TMEM55B-201ENST00000250489 CHATP28329 748 aa21.78■■□□□ 1.08
TMEM55B-201ENST00000250489 MPGP29372 298 aa21.78■■□□□ 1.08
TMEM55B-201ENST00000250489 RNFT1Q5M7Z0 435 aa21.78■■□□□ 1.08
TMEM55B-201ENST00000250489 THOC7Q6I9Y2 204 aaKnown RBP21.78■■□□□ 1.08
TMEM55B-201ENST00000250489 OSR2Q8N2R0 312 aa21.78■■□□□ 1.08
TMEM55B-201ENST00000250489 ZSCAN4Q8NAM6 433 aaPredicted RBP21.78■■□□□ 1.08
TMEM55B-201ENST00000250489 OR6K3Q8NGY3 331 aa21.78■■□□□ 1.08
TMEM55B-201ENST00000250489 REPIN1Q9BWE0 567 aaKnown RBP21.78■■□□□ 1.08
TMEM55B-201ENST00000250489 LDAHQ9H6V9 325 aa21.78■■□□□ 1.08
TMEM55B-201ENST00000250489 AK3Q9UIJ7 227 aa21.78■■□□□ 1.08
TMEM55B-201ENST00000250489 ZNF407Q9C0G0 2248 aa21.77■■□□□ 1.08
TMEM55B-201ENST00000250489 C5orf49A4QMS7 147 aa21.77■■□□□ 1.08
TMEM55B-201ENST00000250489 CDRT15L2A8MXV6 281 aa21.77■■□□□ 1.08
TMEM55B-201ENST00000250489 RRP8O43159 456 aaKnown RBP21.77■■□□□ 1.08
TMEM55B-201ENST00000250489 CCL2P13500 99 aa21.77■■□□□ 1.08
TMEM55B-201ENST00000250489 RRADP55042 308 aa21.77■■□□□ 1.08
TMEM55B-201ENST00000250489 LRRC37A5PQ49AS3 106 aa21.77■■□□□ 1.08
TMEM55B-201ENST00000250489 NSUN5P2Q63ZY6 315 aa21.77■■□□□ 1.08
TMEM55B-201ENST00000250489 NAXEQ8NCW5 288 aa21.77■■□□□ 1.08
TMEM55B-201ENST00000250489 MRPS24Q96EL2 167 aaKnown RBP21.77■■□□□ 1.08
TMEM55B-201ENST00000250489 WDYHV1Q96HA8 205 aa21.77■■□□□ 1.08
TMEM55B-201ENST00000250489 SPRR3Q9UBC9 169 aa21.77■■□□□ 1.08
TMEM55B-201ENST00000250489 KIF25Q9UIL4 384 aa21.77■■□□□ 1.08
TMEM55B-201ENST00000250489 TNFSF18Q9UNG2 199 aa21.77■■□□□ 1.08
TMEM55B-201ENST00000250489 ZNF850A8MQ14 1090 aa21.76■■□□□ 1.07
TMEM55B-201ENST00000250489 FTH1P19P0C7X4 201 aa21.76■■□□□ 1.07
TMEM55B-201ENST00000250489 CD79AP11912 226 aa21.76■■□□□ 1.07
TMEM55B-201ENST00000250489 AP2S1P53680 142 aaPredicted RBP21.76■■□□□ 1.07
TMEM55B-201ENST00000250489 PIGYQ3MUY2 71 aa21.76■■□□□ 1.07
TMEM55B-201ENST00000250489 CLEC18BQ6UXF7 455 aa21.76■■□□□ 1.07
TMEM55B-201ENST00000250489 COMMD7Q86VX2 200 aa21.76■■□□□ 1.07
TMEM55B-201ENST00000250489 ZNF552Q9H707 407 aaPredicted RBP21.76■■□□□ 1.07
TMEM55B-201ENST00000250489 GPR160Q9UJ42 338 aa21.76■■□□□ 1.07
TMEM55B-201ENST00000250489 EDARQ9UNE0 448 aa21.76■■□□□ 1.07
TMEM55B-201ENST00000250489 TRGV5A0A0B4J1U4 118 aa21.76■■□□□ 1.07
TMEM55B-201ENST00000250489 GEMIN2O14893 280 aaKnown RBP21.76■■□□□ 1.07
TMEM55B-201ENST00000250489 ZNHIT1O43257 154 aa21.76■■□□□ 1.07
TMEM55B-201ENST00000250489 SFTPBP07988 381 aa21.76■■□□□ 1.07
TMEM55B-201ENST00000250489 ARR3P36575 388 aa21.76■■□□□ 1.07
TMEM55B-201ENST00000250489 SUPT4H1P63272 117 aaKnown RBP21.76■■□□□ 1.07
TMEM55B-201ENST00000250489 SURF2Q15527 256 aaPredicted RBP21.76■■□□□ 1.07
TMEM55B-201ENST00000250489 FBXL14Q8N1E6 418 aa21.76■■□□□ 1.07
TMEM55B-201ENST00000250489 TMEM178AQ8NBL3 297 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms