RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 MTCP1P56278 107 aa11.36□□□□□ -0.59
SLIRP-201ENST00000238688 DGCR2P98153 550 aa11.36□□□□□ -0.59
SLIRP-201ENST00000238688 GK2Q14410 553 aaPredicted RBP11.36□□□□□ -0.59
SLIRP-201ENST00000238688 ZMYND11Q15326 602 aa11.36□□□□□ -0.59
SLIRP-201ENST00000238688 TESK1Q15569 626 aa11.36□□□□□ -0.59
SLIRP-201ENST00000238688 PLXDC2Q6UX71 529 aa11.36□□□□□ -0.59
SLIRP-201ENST00000238688 BHLHA15Q7RTS1 189 aaPredicted RBP11.36□□□□□ -0.59
SLIRP-201ENST00000238688 TMEM200AQ86VY9 491 aa11.36□□□□□ -0.59
SLIRP-201ENST00000238688 RELL2Q8NC24 303 aaPredicted RBP11.36□□□□□ -0.59
SLIRP-201ENST00000238688 OR5A2Q8NGI9 324 aa11.36□□□□□ -0.59
SLIRP-201ENST00000238688 OR2AE1Q8NHA4 323 aa11.36□□□□□ -0.59
SLIRP-201ENST00000238688 GPX8Q8TED1 209 aa11.36□□□□□ -0.59
SLIRP-201ENST00000238688 C1orf147Q96MC9 270 aaPredicted RBP11.36□□□□□ -0.59
SLIRP-201ENST00000238688 MARVELD1Q9BSK0 173 aa11.36□□□□□ -0.59
SLIRP-201ENST00000238688 METTL9Q9H1A3 318 aa11.36□□□□□ -0.59
SLIRP-201ENST00000238688 DPAGT1Q9H3H5 408 aa11.36□□□□□ -0.59
SLIRP-201ENST00000238688 AUNIPQ9H7T9 357 aa11.36□□□□□ -0.59
SLIRP-201ENST00000238688 MRPL15Q9P015 296 aaKnown RBP11.36□□□□□ -0.59
SLIRP-201ENST00000238688 ANKRD30BLA7E2S9 258 aa11.35□□□□□ -0.59
SLIRP-201ENST00000238688 SERPINE3A8MV23 424 aa11.35□□□□□ -0.59
SLIRP-201ENST00000238688 RAB27BO00194 218 aa11.35□□□□□ -0.59
SLIRP-201ENST00000238688 CDC14BO60729 498 aa11.35□□□□□ -0.59
SLIRP-201ENST00000238688 FAM157BP0CG42 384 aa11.35□□□□□ -0.59
SLIRP-201ENST00000238688 IL32P24001 234 aa11.35□□□□□ -0.59
SLIRP-201ENST00000238688 PMELP40967 661 aa11.35□□□□□ -0.59
SLIRP-201ENST00000238688 ZP1P60852 638 aa11.35□□□□□ -0.59
SLIRP-201ENST00000238688 SNTB2Q13425 540 aaKnown RBP11.35□□□□□ -0.59
SLIRP-201ENST00000238688 UNC119Q13432 240 aa11.35□□□□□ -0.59
SLIRP-201ENST00000238688 TNK1Q13470 666 aa11.35□□□□□ -0.59
SLIRP-201ENST00000238688 CEACAM21Q3KPI0 293 aa11.35□□□□□ -0.59
SLIRP-201ENST00000238688 Q8NFD4 153 aa11.35□□□□□ -0.59
SLIRP-201ENST00000238688 OR10R2Q8NGX6 335 aa11.35□□□□□ -0.59
SLIRP-201ENST00000238688 OR52I2Q8NH67 350 aa11.35□□□□□ -0.59
SLIRP-201ENST00000238688 TNFAIP8L1Q8WVP5 186 aa11.35□□□□□ -0.59
SLIRP-201ENST00000238688 AQP3Q92482 292 aa11.35□□□□□ -0.59
SLIRP-201ENST00000238688 HIST1H2AAQ96QV6 131 aa11.35□□□□□ -0.59
SLIRP-201ENST00000238688 SOX7Q9BT81 388 aa11.35□□□□□ -0.59
SLIRP-201ENST00000238688 NOX3Q9HBY0 568 aa11.35□□□□□ -0.59
SLIRP-201ENST00000238688 NUBP2Q9Y5Y2 271 aa11.35□□□□□ -0.59
SLIRP-201ENST00000238688 HRNRQ86YZ3 2850 aaPredicted RBP11.35□□□□□ -0.59
SLIRP-201ENST00000238688 TRAV18A0A075B6X5 111 aa11.34□□□□□ -0.59
SLIRP-201ENST00000238688 ZNF503-AS2A6NEH8 195 aa11.34□□□□□ -0.59
SLIRP-201ENST00000238688 CD300LBA8K4G0 201 aa11.34□□□□□ -0.59
SLIRP-201ENST00000238688 LYZL6O75951 148 aa11.34□□□□□ -0.59
SLIRP-201ENST00000238688 RCVRNP35243 200 aa11.34□□□□□ -0.59
SLIRP-201ENST00000238688 EFNB2P52799 333 aa11.34□□□□□ -0.59
SLIRP-201ENST00000238688 TAS2R19P59542 299 aa11.34□□□□□ -0.59
SLIRP-201ENST00000238688 RPS27AP62979 156 aaKnown RBP11.34□□□□□ -0.59
SLIRP-201ENST00000238688 MZT1Q08AG7 82 aa11.34□□□□□ -0.59
SLIRP-201ENST00000238688 FOXF2Q12947 444 aa11.34□□□□□ -0.59
SLIRP-201ENST00000238688 PLCXD3Q63HM9 321 aa11.34□□□□□ -0.59
SLIRP-201ENST00000238688 ZDHHC23Q8IYP9 409 aa11.34□□□□□ -0.59
SLIRP-201ENST00000238688 PAQR4Q8N4S7 273 aaPredicted RBP11.34□□□□□ -0.59
SLIRP-201ENST00000238688 ZNF610Q8N9Z0 462 aa11.34□□□□□ -0.59
SLIRP-201ENST00000238688 WDR31Q8NA23 367 aa11.34□□□□□ -0.59
SLIRP-201ENST00000238688 OR56B2PQ8NGI1 322 aa11.34□□□□□ -0.59
SLIRP-201ENST00000238688 MUCL1Q96DR8 90 aa11.34□□□□□ -0.59
SLIRP-201ENST00000238688 SPEF1Q9Y4P9 236 aa11.34□□□□□ -0.59
SLIRP-201ENST00000238688 C5orf63A6NC05 138 aa11.33□□□□□ -0.6
SLIRP-201ENST00000238688 SMPD2O60906 423 aa11.33□□□□□ -0.6
SLIRP-201ENST00000238688 CYB5AP00167 134 aa11.33□□□□□ -0.6
SLIRP-201ENST00000238688 CSTBP04080 98 aaKnown RBP11.33□□□□□ -0.6
SLIRP-201ENST00000238688 CD3GP09693 182 aa11.33□□□□□ -0.6
SLIRP-201ENST00000238688 GTF2F2P13984 249 aa11.33□□□□□ -0.6
SLIRP-201ENST00000238688 PPP3CBP16298 524 aa11.33□□□□□ -0.6
SLIRP-201ENST00000238688 CCNOP22674 350 aa11.33□□□□□ -0.6
SLIRP-201ENST00000238688 WNT5AP41221 380 aa11.33□□□□□ -0.6
SLIRP-201ENST00000238688 OR3A4PP47883 348 aa11.33□□□□□ -0.6
SLIRP-201ENST00000238688 SNTB1Q13884 538 aaKnown RBP11.33□□□□□ -0.6
SLIRP-201ENST00000238688 MEF2DQ14814 521 aa11.33□□□□□ -0.6
SLIRP-201ENST00000238688 ZNF260Q3ZCT1 412 aa11.33□□□□□ -0.6
SLIRP-201ENST00000238688 PLA1AQ53H76 456 aa11.33□□□□□ -0.6
SLIRP-201ENST00000238688 ACTBL2Q562R1 376 aa11.33□□□□□ -0.6
SLIRP-201ENST00000238688 NHLRC3Q5JS37 347 aa11.33□□□□□ -0.6
SLIRP-201ENST00000238688 ELP2Q6IA86 826 aa11.33□□□□□ -0.6
SLIRP-201ENST00000238688 LINC00596Q86U02 117 aa11.33□□□□□ -0.6
SLIRP-201ENST00000238688 CXorf67Q86X51 503 aaPredicted RBP11.33□□□□□ -0.6
SLIRP-201ENST00000238688 MKXQ8IYA7 352 aa11.33□□□□□ -0.6
SLIRP-201ENST00000238688 TMEM229BQ8NBD8 167 aa11.33□□□□□ -0.6
SLIRP-201ENST00000238688 GAL3ST1Q99999 423 aa11.33□□□□□ -0.6
SLIRP-201ENST00000238688 PAPOLGQ9BWT3 736 aaKnown RBP11.33□□□□□ -0.6
SLIRP-201ENST00000238688 LPAR5Q9H1C0 372 aa11.33□□□□□ -0.6
SLIRP-201ENST00000238688 PLK3Q9H4B4 646 aa11.33□□□□□ -0.6
SLIRP-201ENST00000238688 HSF4Q9ULV5 492 aa11.33□□□□□ -0.6
SLIRP-201ENST00000238688 STARD10Q9Y365 291 aa11.33□□□□□ -0.6
SLIRP-201ENST00000238688 HEATR1Q9H583 2144 aaKnown RBP11.33□□□□□ -0.6
SLIRP-201ENST00000238688 C2CD3Q4AC94 2353 aa11.32□□□□□ -0.6
SLIRP-201ENST00000238688 MTORP42345 2549 aa11.32□□□□□ -0.6
SLIRP-201ENST00000238688 ITPR3Q14573 2671 aa11.32□□□□□ -0.6
SLIRP-201ENST00000238688 PQLC2LA1A4F0 135 aa11.32□□□□□ -0.6
SLIRP-201ENST00000238688 POM121CA8CG34 1229 aa11.32□□□□□ -0.6
SLIRP-201ENST00000238688 A8MXE2 369 aa11.32□□□□□ -0.6
SLIRP-201ENST00000238688 IQCF6A8MYZ5 107 aa11.32□□□□□ -0.6
SLIRP-201ENST00000238688 LANCL1O43813 399 aa11.32□□□□□ -0.6
SLIRP-201ENST00000238688 PRAF2O60831 178 aa11.32□□□□□ -0.6
SLIRP-201ENST00000238688 CRTAPO75718 401 aaPredicted RBP11.32□□□□□ -0.6
SLIRP-201ENST00000238688 DHFRP00374 187 aa11.32□□□□□ -0.6
SLIRP-201ENST00000238688 AKAIN1P0CW23 69 aa11.32□□□□□ -0.6
SLIRP-201ENST00000238688 ZNF35P13682 527 aa11.32□□□□□ -0.6
SLIRP-201ENST00000238688 HIST1H1DP16402 221 aaKnown RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms