RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 KIAA1549Q9HCM3 1950 aa9.5□□□□□ -0.89
TNFAIP3-201ENST00000237289 TRAV8-7A0A075B6U6 113 aa9.49□□□□□ -0.89
TNFAIP3-201ENST00000237289 LOC100289279A0A1B0GTE1 492 aa9.49□□□□□ -0.89
TNFAIP3-201ENST00000237289 C5orf63A6NC05 138 aa9.49□□□□□ -0.89
TNFAIP3-201ENST00000237289 IFITM5A6NNB3 132 aa9.49□□□□□ -0.89
TNFAIP3-201ENST00000237289 CTAG2O75638 210 aa9.49□□□□□ -0.89
TNFAIP3-201ENST00000237289 ZNF205O95201 554 aa9.49□□□□□ -0.89
TNFAIP3-201ENST00000237289 RBM39Q14498 530 aaKnown RBP9.49□□□□□ -0.89
TNFAIP3-201ENST00000237289 FAM58AQ8N1B3 248 aa9.49□□□□□ -0.89
TNFAIP3-201ENST00000237289 H1FXQ92522 213 aaKnown RBP9.49□□□□□ -0.89
TNFAIP3-201ENST00000237289 METTL17Q9H7H0 456 aaPredicted RBP9.49□□□□□ -0.89
TNFAIP3-201ENST00000237289 IFT46Q9NQC8 304 aa9.49□□□□□ -0.89
TNFAIP3-201ENST00000237289 RAB22AQ9UL26 194 aa9.49□□□□□ -0.89
TNFAIP3-201ENST00000237289 CEPT1Q9Y6K0 416 aa9.49□□□□□ -0.89
TNFAIP3-201ENST00000237289 PPIAL4EA0A075B759 164 aa9.49□□□□□ -0.89
TNFAIP3-201ENST00000237289 TRIM64BA6NI03 449 aa9.49□□□□□ -0.89
TNFAIP3-201ENST00000237289 ZSCAN5BA6NJL1 495 aa9.49□□□□□ -0.89
TNFAIP3-201ENST00000237289 PPIAL4DF5H284 164 aa9.49□□□□□ -0.89
TNFAIP3-201ENST00000237289 PPIAL4FP0DN26 164 aa9.49□□□□□ -0.89
TNFAIP3-201ENST00000237289 CCL1P22362 96 aa9.49□□□□□ -0.89
TNFAIP3-201ENST00000237289 UBE2V2Q15819 145 aa9.49□□□□□ -0.89
TNFAIP3-201ENST00000237289 TMEM91Q6ZNR0 172 aa9.49□□□□□ -0.89
TNFAIP3-201ENST00000237289 OR56B1Q8NGI3 324 aa9.49□□□□□ -0.89
TNFAIP3-201ENST00000237289 KCTD12Q96CX2 325 aaKnown RBP9.49□□□□□ -0.89
TNFAIP3-201ENST00000237289 ZNF649Q9BS31 505 aa9.49□□□□□ -0.89
TNFAIP3-201ENST00000237289 PPIAL4AQ9Y536 164 aa9.49□□□□□ -0.89
TNFAIP3-201ENST00000237289 PRR14LQ5THK1 2151 aa9.49□□□□□ -0.89
TNFAIP3-201ENST00000237289 H0YL77 283 aa9.49□□□□□ -0.89
TNFAIP3-201ENST00000237289 AIPO00170 330 aa9.49□□□□□ -0.89
TNFAIP3-201ENST00000237289 SLC17A2O00624 439 aa9.49□□□□□ -0.89
TNFAIP3-201ENST00000237289 SNRPBP14678 240 aaKnown RBP9.49□□□□□ -0.89
TNFAIP3-201ENST00000237289 DAOP14920 347 aa9.49□□□□□ -0.89
TNFAIP3-201ENST00000237289 PYDC2Q56P42 97 aa9.49□□□□□ -0.89
TNFAIP3-201ENST00000237289 GDPD3Q7L5L3 318 aa9.49□□□□□ -0.89
TNFAIP3-201ENST00000237289 OSR2Q8N2R0 312 aa9.49□□□□□ -0.89
TNFAIP3-201ENST00000237289 NKX3-1Q99801 234 aaPredicted RBP9.49□□□□□ -0.89
TNFAIP3-201ENST00000237289 SPACA1Q9HBV2 294 aa9.49□□□□□ -0.89
TNFAIP3-201ENST00000237289 ST3GAL6Q9Y274 331 aa9.49□□□□□ -0.89
TNFAIP3-201ENST00000237289 NPTNQ9Y639 398 aa9.49□□□□□ -0.89
TNFAIP3-201ENST00000237289 SPG11Q96JI7 2443 aa9.49□□□□□ -0.89
TNFAIP3-201ENST00000237289 TRIM64A6NGJ6 449 aa9.49□□□□□ -0.89
TNFAIP3-201ENST00000237289 ZNF701M0R085 212 aaPredicted RBP9.49□□□□□ -0.89
TNFAIP3-201ENST00000237289 RPS19P39019 145 aaKnown RBP9.49□□□□□ -0.89
TNFAIP3-201ENST00000237289 OR10A3P58181 314 aa9.49□□□□□ -0.89
TNFAIP3-201ENST00000237289 PDZK1IP1Q13113 114 aa9.49□□□□□ -0.89
TNFAIP3-201ENST00000237289 PAN3Q58A45 887 aaKnown RBP9.49□□□□□ -0.89
TNFAIP3-201ENST00000237289 TMEM69Q5SWH9 247 aa9.49□□□□□ -0.89
TNFAIP3-201ENST00000237289 ZNF826PQ6ZT77 177 aa9.49□□□□□ -0.89
TNFAIP3-201ENST00000237289 OR8H2Q8N162 312 aa9.49□□□□□ -0.89
TNFAIP3-201ENST00000237289 LRRK2Q5S007 2527 aa9.48□□□□□ -0.89
TNFAIP3-201ENST00000237289 FABP12A6NFH5 140 aa9.48□□□□□ -0.89
TNFAIP3-201ENST00000237289 HSPB6O14558 160 aa9.48□□□□□ -0.89
TNFAIP3-201ENST00000237289 IGHV1-46P01743 117 aa9.48□□□□□ -0.89
TNFAIP3-201ENST00000237289 FSTP19883 344 aa9.48□□□□□ -0.89
TNFAIP3-201ENST00000237289 BLVRBP30043 206 aaPredicted RBP9.48□□□□□ -0.89
TNFAIP3-201ENST00000237289 VEGFCP49767 419 aa9.48□□□□□ -0.89
TNFAIP3-201ENST00000237289 EIF2B2P49770 351 aaKnown RBP9.48□□□□□ -0.89
TNFAIP3-201ENST00000237289 EDDM3BP56851 147 aa9.48□□□□□ -0.89
TNFAIP3-201ENST00000237289 PITPNAQ00169 270 aa9.48□□□□□ -0.89
TNFAIP3-201ENST00000237289 TRIQKQ629K1 86 aa9.48□□□□□ -0.89
TNFAIP3-201ENST00000237289 RAB12Q6IQ22 244 aa9.48□□□□□ -0.89
TNFAIP3-201ENST00000237289 SCCPDHQ8NBX0 429 aa9.48□□□□□ -0.89
TNFAIP3-201ENST00000237289 C19orf18Q8NEA5 215 aa9.48□□□□□ -0.89
TNFAIP3-201ENST00000237289 PIMREGQ9BSJ6 248 aa9.48□□□□□ -0.89
TNFAIP3-201ENST00000237289 CNTD2Q9H8S5 307 aa9.48□□□□□ -0.89
TNFAIP3-201ENST00000237289 KCNIP1Q9NZI2 227 aa9.48□□□□□ -0.89
TNFAIP3-201ENST00000237289 RCVRNP35243 200 aa9.48□□□□□ -0.89
TNFAIP3-201ENST00000237289 OR3A4PP47883 348 aa9.48□□□□□ -0.89
TNFAIP3-201ENST00000237289 BARHL1Q9BZE3 327 aa9.48□□□□□ -0.89
TNFAIP3-201ENST00000237289 MMP27Q9H306 513 aa9.48□□□□□ -0.89
TNFAIP3-201ENST00000237289 RBMX2Q9Y388 322 aaKnown RBP9.48□□□□□ -0.89
TNFAIP3-201ENST00000237289 TRIM64CA6NLI5 447 aa9.48□□□□□ -0.89
TNFAIP3-201ENST00000237289 NDUFB3O43676 98 aa9.48□□□□□ -0.89
TNFAIP3-201ENST00000237289 EFNA4P52798 201 aa9.48□□□□□ -0.89
TNFAIP3-201ENST00000237289 SPCS2Q15005 226 aa9.48□□□□□ -0.89
TNFAIP3-201ENST00000237289 EFNB3Q15768 340 aa9.48□□□□□ -0.89
TNFAIP3-201ENST00000237289 RNASE12Q5GAN4 147 aaKnown RBP9.48□□□□□ -0.89
TNFAIP3-201ENST00000237289 IZUMO1Q8IYV9 350 aa9.48□□□□□ -0.89
TNFAIP3-201ENST00000237289 SPICQ8N5J4 248 aa9.48□□□□□ -0.89
TNFAIP3-201ENST00000237289 ACBD4Q8NC06 268 aa9.48□□□□□ -0.89
TNFAIP3-201ENST00000237289 LGALS14Q8TCE9 139 aa9.48□□□□□ -0.89
TNFAIP3-201ENST00000237289 ZNF75AQ96N20 296 aa9.48□□□□□ -0.89
TNFAIP3-201ENST00000237289 TRAV18A0A075B6X5 111 aa9.47□□□□□ -0.89
TNFAIP3-201ENST00000237289 TRBV5-7A0A0A0MS05 114 aa9.47□□□□□ -0.89
TNFAIP3-201ENST00000237289 SIRPB1O00241 398 aa9.47□□□□□ -0.89
TNFAIP3-201ENST00000237289 ADAM20O43506 726 aa9.47□□□□□ -0.89
TNFAIP3-201ENST00000237289 ALDOBP05062 364 aa9.47□□□□□ -0.89
TNFAIP3-201ENST00000237289 MGMTP16455 207 aa9.47□□□□□ -0.89
TNFAIP3-201ENST00000237289 DUSP1P28562 367 aa9.47□□□□□ -0.89
TNFAIP3-201ENST00000237289 PPOXP50336 477 aa9.47□□□□□ -0.89
TNFAIP3-201ENST00000237289 TAF9Q16594 264 aa9.47□□□□□ -0.89
TNFAIP3-201ENST00000237289 TRIM16LQ309B1 348 aa9.47□□□□□ -0.89
TNFAIP3-201ENST00000237289 C2orf76Q3KRA6 126 aa9.47□□□□□ -0.89
TNFAIP3-201ENST00000237289 LRRC10Q5BKY1 277 aa9.47□□□□□ -0.89
TNFAIP3-201ENST00000237289 SNX29P2Q8IUI4 249 aa9.47□□□□□ -0.89
TNFAIP3-201ENST00000237289 MUC20Q8N307 709 aaPredicted RBP9.47□□□□□ -0.89
TNFAIP3-201ENST00000237289 RGP1Q92546 391 aaPredicted RBP9.47□□□□□ -0.89
TNFAIP3-201ENST00000237289 DACT3Q96B18 629 aaPredicted RBP9.47□□□□□ -0.89
TNFAIP3-201ENST00000237289 TMEM106BQ9NUM4 274 aa9.47□□□□□ -0.89
TNFAIP3-201ENST00000237289 EXTL2Q9UBQ6 330 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms