RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 FUT6P51993 359 aa14.05□□□□□ -0.16
UBE3D-201ENST00000237186 CHRFAM7AQ494W8 412 aa14.05□□□□□ -0.16
UBE3D-201ENST00000237186 C6orf201Q7Z4U5 140 aa14.05□□□□□ -0.16
UBE3D-201ENST00000237186 EIF4E3Q8N5X7 224 aaKnown RBP14.05□□□□□ -0.16
UBE3D-201ENST00000237186 ZSCAN4Q8NAM6 433 aaPredicted RBP14.05□□□□□ -0.16
UBE3D-201ENST00000237186 PXT1Q8NFP0 134 aa14.05□□□□□ -0.16
UBE3D-201ENST00000237186 OR1S1Q8NH92 325 aa14.05□□□□□ -0.16
UBE3D-201ENST00000237186 PHYHIPLQ96FC7 376 aa14.05□□□□□ -0.16
UBE3D-201ENST00000237186 POM121Q96HA1 1249 aa14.05□□□□□ -0.16
UBE3D-201ENST00000237186 VRK1Q99986 396 aaPredicted RBP14.05□□□□□ -0.16
UBE3D-201ENST00000237186 WDR13Q9H1Z4 485 aa14.05□□□□□ -0.16
UBE3D-201ENST00000237186 RNF122Q9H9V4 155 aa14.05□□□□□ -0.16
UBE3D-201ENST00000237186 EHFQ9NZC4 300 aa14.05□□□□□ -0.16
UBE3D-201ENST00000237186 NOSIPQ9Y314 301 aaKnown RBP14.05□□□□□ -0.16
UBE3D-201ENST00000237186 CDK2AP1O14519 115 aa14.04□□□□□ -0.16
UBE3D-201ENST00000237186 CSTBP04080 98 aaKnown RBP14.04□□□□□ -0.16
UBE3D-201ENST00000237186 RLN2P04090 185 aa14.04□□□□□ -0.16
UBE3D-201ENST00000237186 SERPINA5P05154 406 aa14.04□□□□□ -0.16
UBE3D-201ENST00000237186 ZNF708P17019 499 aa14.04□□□□□ -0.16
UBE3D-201ENST00000237186 DTYMKP23919 212 aa14.04□□□□□ -0.16
UBE3D-201ENST00000237186 ZNF92Q03936 586 aa14.04□□□□□ -0.16
UBE3D-201ENST00000237186 RSU1Q15404 277 aa14.04□□□□□ -0.16
UBE3D-201ENST00000237186 LRRC20Q8TCA0 184 aa14.04□□□□□ -0.16
UBE3D-201ENST00000237186 CXorf58Q96LI9 332 aa14.04□□□□□ -0.16
UBE3D-201ENST00000237186 IP6K3Q96PC2 410 aa14.04□□□□□ -0.16
UBE3D-201ENST00000237186 CHMP1AQ9HD42 196 aaPredicted RBP14.04□□□□□ -0.16
UBE3D-201ENST00000237186 RASL12Q9NYN1 266 aa14.04□□□□□ -0.16
UBE3D-201ENST00000237186 FAM230AA0A1W2PPH8 454 aa14.04□□□□□ -0.16
UBE3D-201ENST00000237186 EEF1E1-BLOC1S5C9J1V9 151 aa14.04□□□□□ -0.16
UBE3D-201ENST00000237186 SDCBPO00560 298 aaPredicted RBP14.04□□□□□ -0.16
UBE3D-201ENST00000237186 HTR3BO95264 441 aa14.04□□□□□ -0.16
UBE3D-201ENST00000237186 ZNF806P0C7X5 589 aa14.04□□□□□ -0.16
UBE3D-201ENST00000237186 GABRR1P24046 479 aa14.04□□□□□ -0.16
UBE3D-201ENST00000237186 OR1C1Q15619 314 aa14.04□□□□□ -0.16
UBE3D-201ENST00000237186 LRRC37A5PQ49AS3 106 aa14.04□□□□□ -0.16
UBE3D-201ENST00000237186 DMRTA2Q96SC8 542 aa14.04□□□□□ -0.16
UBE3D-201ENST00000237186 PFDN2Q9UHV9 154 aa14.04□□□□□ -0.16
UBE3D-201ENST00000237186 KIAA1549Q9HCM3 1950 aa14.03□□□□□ -0.16
UBE3D-201ENST00000237186 RTTNQ86VV8 2226 aa14.03□□□□□ -0.16
UBE3D-201ENST00000237186 IGKV1D-8A0A087WSZ0 117 aa14.03□□□□□ -0.16
UBE3D-201ENST00000237186 ZNF816-ZNF321PA0A0X1KG74 233 aa14.03□□□□□ -0.16
UBE3D-201ENST00000237186 C5orf51A6NDU8 294 aa14.03□□□□□ -0.16
UBE3D-201ENST00000237186 A8MXK9 166 aa14.03□□□□□ -0.16
UBE3D-201ENST00000237186 LYL1P12980 280 aa14.03□□□□□ -0.16
UBE3D-201ENST00000237186 GLRA1P23415 457 aa14.03□□□□□ -0.16
UBE3D-201ENST00000237186 BAMBIQ13145 260 aa14.03□□□□□ -0.16
UBE3D-201ENST00000237186 PABPC1L2AQ5JQF8 200 aa14.03□□□□□ -0.16
UBE3D-201ENST00000237186 HSD17B13Q7Z5P4 300 aaPredicted RBP14.03□□□□□ -0.16
UBE3D-201ENST00000237186 INO80EQ8NBZ0 244 aaPredicted RBP14.03□□□□□ -0.16
UBE3D-201ENST00000237186 DHRS9Q9BPW9 319 aa14.03□□□□□ -0.16
UBE3D-201ENST00000237186 RNF126Q9BV68 326 aa14.03□□□□□ -0.16
UBE3D-201ENST00000237186 SLC7A11Q9UPY5 501 aa14.03□□□□□ -0.16
UBE3D-201ENST00000237186 KMT2EQ8IZD2 1858 aa14.02□□□□□ -0.16
UBE3D-201ENST00000237186 ZNF724A8MTY0 619 aa14.02□□□□□ -0.16
UBE3D-201ENST00000237186 ANGPTL7O43827 346 aa14.02□□□□□ -0.16
UBE3D-201ENST00000237186 FGF2P09038 288 aa14.02□□□□□ -0.16
UBE3D-201ENST00000237186 EDN3P14138 238 aa14.02□□□□□ -0.16
UBE3D-201ENST00000237186 ZP3P21754 424 aa14.02□□□□□ -0.16
UBE3D-201ENST00000237186 CHATP28329 748 aa14.02□□□□□ -0.16
UBE3D-201ENST00000237186 AIMP2Q13155 320 aaKnown RBP14.02□□□□□ -0.16
UBE3D-201ENST00000237186 TAF9Q16594 264 aa14.02□□□□□ -0.16
UBE3D-201ENST00000237186 ANKRD55Q3KP44 614 aa14.02□□□□□ -0.16
UBE3D-201ENST00000237186 PLEKHN1Q494U1 663 aaPredicted RBP14.02□□□□□ -0.16
UBE3D-201ENST00000237186 MOB3CQ70IA8 216 aa14.02□□□□□ -0.16
UBE3D-201ENST00000237186 CPEB3Q8NE35 698 aaKnown RBP14.02□□□□□ -0.16
UBE3D-201ENST00000237186 TTTY12Q9BZ98 90 aa14.02□□□□□ -0.16
UBE3D-201ENST00000237186 DNTTIP1Q9H147 329 aa14.02□□□□□ -0.16
UBE3D-201ENST00000237186 NARFLQ9H6Q4 476 aa14.02□□□□□ -0.16
UBE3D-201ENST00000237186 BCO1Q9HAY6 547 aa14.02□□□□□ -0.16
UBE3D-201ENST00000237186 PCDHB16Q9NRJ7 776 aa14.02□□□□□ -0.16
UBE3D-201ENST00000237186 SLC7A10Q9NS82 523 aa14.02□□□□□ -0.16
UBE3D-201ENST00000237186 MBD2Q9UBB5 411 aa14.02□□□□□ -0.16
UBE3D-201ENST00000237186 ANXA10Q9UJ72 324 aa14.02□□□□□ -0.16
UBE3D-201ENST00000237186 IGKV1-12A0A0C4DH73 117 aa14.01□□□□□ -0.17
UBE3D-201ENST00000237186 C13orf42A0A1B0GVH6 325 aa14.01□□□□□ -0.17
UBE3D-201ENST00000237186 MSTNO14793 375 aa14.01□□□□□ -0.17
UBE3D-201ENST00000237186 SPRY1O43609 319 aaPredicted RBP14.01□□□□□ -0.17
UBE3D-201ENST00000237186 IGKV1D-12P01611 117 aa14.01□□□□□ -0.17
UBE3D-201ENST00000237186 CELA3AP09093 270 aa14.01□□□□□ -0.17
UBE3D-201ENST00000237186 COX5BP10606 129 aa14.01□□□□□ -0.17
UBE3D-201ENST00000237186 PMELP40967 661 aa14.01□□□□□ -0.17
UBE3D-201ENST00000237186 PDZK1IP1Q13113 114 aa14.01□□□□□ -0.17
UBE3D-201ENST00000237186 IL15RAQ13261 267 aa14.01□□□□□ -0.17
UBE3D-201ENST00000237186 NKAPLQ5M9Q1 402 aa14.01□□□□□ -0.17
UBE3D-201ENST00000237186 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.01□□□□□ -0.17
UBE3D-201ENST00000237186 Q8NFD4 153 aa14.01□□□□□ -0.17
UBE3D-201ENST00000237186 MAFIPQ8WZ33 124 aa14.01□□□□□ -0.17
UBE3D-201ENST00000237186 HES7Q9BYE0 225 aa14.01□□□□□ -0.17
UBE3D-201ENST00000237186 TMEM9BQ9NQ34 198 aa14.01□□□□□ -0.17
UBE3D-201ENST00000237186 TEX13DA0A0J9YY54 714 aaPredicted RBP14.01□□□□□ -0.17
UBE3D-201ENST00000237186 A0A1B0GW55 424 aa14.01□□□□□ -0.17
UBE3D-201ENST00000237186 SYNGR4O95473 234 aa14.01□□□□□ -0.17
UBE3D-201ENST00000237186 DUX4L2P0CJ85 424 aa14.01□□□□□ -0.17
UBE3D-201ENST00000237186 DUX4L3P0CJ86 424 aa14.01□□□□□ -0.17
UBE3D-201ENST00000237186 DUX4L4P0CJ87 422 aa14.01□□□□□ -0.17
UBE3D-201ENST00000237186 DUX4L5P0CJ88 424 aa14.01□□□□□ -0.17
UBE3D-201ENST00000237186 DUX4L6P0CJ89 424 aa14.01□□□□□ -0.17
UBE3D-201ENST00000237186 DUX4L7P0CJ90 424 aa14.01□□□□□ -0.17
UBE3D-201ENST00000237186 PI3P19957 117 aa14.01□□□□□ -0.17
UBE3D-201ENST00000237186 ITGA3P26006 1051 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms