RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 PCDHGB1Q9Y5G3 927 aa11.4□□□□□ -0.58
VEGFA-201ENST00000230480 HSPE1-MOB4S4R3N1 261 aa11.4□□□□□ -0.58
VEGFA-201ENST00000230480 STAB1Q9NY15 2570 aa11.4□□□□□ -0.58
VEGFA-201ENST00000230480 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.39□□□□□ -0.59
VEGFA-201ENST00000230480 TMEM210A6NLX4 147 aa11.39□□□□□ -0.59
VEGFA-201ENST00000230480 LRRC30A6NM36 301 aa11.39□□□□□ -0.59
VEGFA-201ENST00000230480 NOL3O60936 208 aaKnown RBP11.39□□□□□ -0.59
VEGFA-201ENST00000230480 ADRA2CP18825 462 aa11.39□□□□□ -0.59
VEGFA-201ENST00000230480 MYF6P23409 242 aa11.39□□□□□ -0.59
VEGFA-201ENST00000230480 MPZP25189 248 aa11.39□□□□□ -0.59
VEGFA-201ENST00000230480 GNALP38405 381 aa11.39□□□□□ -0.59
VEGFA-201ENST00000230480 ERVK11-1P61568 191 aa11.39□□□□□ -0.59
VEGFA-201ENST00000230480 GNG3P63215 75 aa11.39□□□□□ -0.59
VEGFA-201ENST00000230480 KLHL22Q53GT1 634 aa11.39□□□□□ -0.59
VEGFA-201ENST00000230480 FAHD2BQ6P2I3 314 aaPredicted RBP11.39□□□□□ -0.59
VEGFA-201ENST00000230480 ANGPTL5Q86XS5 388 aa11.39□□□□□ -0.59
VEGFA-201ENST00000230480 C1orf87Q8N0U7 546 aa11.39□□□□□ -0.59
VEGFA-201ENST00000230480 ANGPTL6Q8NI99 470 aa11.39□□□□□ -0.59
VEGFA-201ENST00000230480 NEIL1Q96FI4 390 aaPredicted RBP11.39□□□□□ -0.59
VEGFA-201ENST00000230480 FAHD2AQ96GK7 314 aa11.39□□□□□ -0.59
VEGFA-201ENST00000230480 CCL13Q99616 98 aa11.39□□□□□ -0.59
VEGFA-201ENST00000230480 BEX2Q9BXY8 128 aa11.39□□□□□ -0.59
VEGFA-201ENST00000230480 SHARPINQ9H0F6 387 aa11.39□□□□□ -0.59
VEGFA-201ENST00000230480 INPP5EQ9NRR6 644 aa11.39□□□□□ -0.59
VEGFA-201ENST00000230480 PAK1IP1Q9NWT1 392 aaPredicted RBP11.39□□□□□ -0.59
VEGFA-201ENST00000230480 MIOXQ9UGB7 285 aa11.39□□□□□ -0.59
VEGFA-201ENST00000230480 DIMT1Q9UNQ2 313 aaKnown RBP11.39□□□□□ -0.59
VEGFA-201ENST00000230480 SOX21Q9Y651 276 aaPredicted RBP11.39□□□□□ -0.59
VEGFA-201ENST00000230480 IGKV1D-17A0A075B6S4 117 aa11.38□□□□□ -0.59
VEGFA-201ENST00000230480 KIR2DS1A0A191URI9 304 aa11.38□□□□□ -0.59
VEGFA-201ENST00000230480 FUOMA2VDF0 154 aa11.38□□□□□ -0.59
VEGFA-201ENST00000230480 ANXA2P2A6NMY6 339 aa11.38□□□□□ -0.59
VEGFA-201ENST00000230480 OGG1O15527 345 aa11.38□□□□□ -0.59
VEGFA-201ENST00000230480 SYT7O43581 403 aa11.38□□□□□ -0.59
VEGFA-201ENST00000230480 NOS1APO75052 506 aaPredicted RBP11.38□□□□□ -0.59
VEGFA-201ENST00000230480 FOXH1O75593 365 aa11.38□□□□□ -0.59
VEGFA-201ENST00000230480 OCM2P0CE71 109 aa11.38□□□□□ -0.59
VEGFA-201ENST00000230480 OCMP0CE72 109 aaPredicted RBP11.38□□□□□ -0.59
VEGFA-201ENST00000230480 RPS2P15880 293 aaKnown RBP11.38□□□□□ -0.59
VEGFA-201ENST00000230480 C21orf33P30042 268 aaPredicted RBP11.38□□□□□ -0.59
VEGFA-201ENST00000230480 PLCXD3Q63HM9 321 aa11.38□□□□□ -0.59
VEGFA-201ENST00000230480 HAGHLQ6PII5 290 aaPredicted RBP11.38□□□□□ -0.59
VEGFA-201ENST00000230480 ZNF788Q6ZQV5 615 aa11.38□□□□□ -0.59
VEGFA-201ENST00000230480 CLVS1Q8IUQ0 354 aaPredicted RBP11.38□□□□□ -0.59
VEGFA-201ENST00000230480 FAM216BQ8N7L0 139 aa11.38□□□□□ -0.59
VEGFA-201ENST00000230480 C12orf43Q96C57 262 aaKnown RBP11.38□□□□□ -0.59
VEGFA-201ENST00000230480 PDCD1LG2Q9BQ51 273 aa11.38□□□□□ -0.59
VEGFA-201ENST00000230480 SSBP3Q9BWW4 388 aaPredicted RBP11.38□□□□□ -0.59
VEGFA-201ENST00000230480 CHST5Q9GZS9 411 aa11.38□□□□□ -0.59
VEGFA-201ENST00000230480 HES4Q9HCC6 221 aa11.38□□□□□ -0.59
VEGFA-201ENST00000230480 ABCB9Q9NP78 766 aa11.38□□□□□ -0.59
VEGFA-201ENST00000230480 SNTG1Q9NSN8 517 aa11.38□□□□□ -0.59
VEGFA-201ENST00000230480 ERVK-18Q9QC07 812 aa11.38□□□□□ -0.59
VEGFA-201ENST00000230480 PCDHB10Q9UN67 800 aa11.38□□□□□ -0.59
VEGFA-201ENST00000230480 MAB21L2Q9Y586 359 aa11.38□□□□□ -0.59
VEGFA-201ENST00000230480 A0A1B0GVI7 797 aa11.37□□□□□ -0.59
VEGFA-201ENST00000230480 hCG_1807616A0A1W2PRN6 198 aa11.37□□□□□ -0.59
VEGFA-201ENST00000230480 ANKRD61A6NGH8 418 aa11.37□□□□□ -0.59
VEGFA-201ENST00000230480 OR5B21A6NL26 309 aa11.37□□□□□ -0.59
VEGFA-201ENST00000230480 SNTNA6NMZ2 147 aa11.37□□□□□ -0.59
VEGFA-201ENST00000230480 BOLA2-SMG1P6H3BVE0 249 aa11.37□□□□□ -0.59
VEGFA-201ENST00000230480 MAGEB3O15480 346 aa11.37□□□□□ -0.59
VEGFA-201ENST00000230480 MTRF1O75570 445 aaKnown RBP11.37□□□□□ -0.59
VEGFA-201ENST00000230480 HTR1AP08908 422 aa11.37□□□□□ -0.59
VEGFA-201ENST00000230480 PGA5P0DJD9 388 aa11.37□□□□□ -0.59
VEGFA-201ENST00000230480 CPT2P23786 658 aa11.37□□□□□ -0.59
VEGFA-201ENST00000230480 PITPNBP48739 271 aa11.37□□□□□ -0.59
VEGFA-201ENST00000230480 RPS11P62280 158 aaKnown RBP eCLIP11.37□□□□□ -0.59
VEGFA-201ENST00000230480 MZT1Q08AG7 82 aa11.37□□□□□ -0.59
VEGFA-201ENST00000230480 ST3GAL4Q11206 333 aa11.37□□□□□ -0.59
VEGFA-201ENST00000230480 ZNF529Q6P280 563 aa11.37□□□□□ -0.59
VEGFA-201ENST00000230480 LINC00299Q6ZSB3 139 aa11.37□□□□□ -0.59
VEGFA-201ENST00000230480 COMMD2Q86X83 199 aa11.37□□□□□ -0.59
VEGFA-201ENST00000230480 CD177Q8N6Q3 437 aa11.37□□□□□ -0.59
VEGFA-201ENST00000230480 TBC1D15Q8TC07 691 aa11.37□□□□□ -0.59
VEGFA-201ENST00000230480 FGGYQ96C11 551 aa11.37□□□□□ -0.59
VEGFA-201ENST00000230480 GAFA1Q96PS6 74 aa11.37□□□□□ -0.59
VEGFA-201ENST00000230480 NRIP2Q9BQI9 281 aa11.37□□□□□ -0.59
VEGFA-201ENST00000230480 MTCH1Q9NZJ7 389 aa11.37□□□□□ -0.59
VEGFA-201ENST00000230480 LPAR3Q9UBY5 353 aa11.37□□□□□ -0.59
VEGFA-201ENST00000230480 METRNQ9UJH8 293 aa11.37□□□□□ -0.59
VEGFA-201ENST00000230480 TRAV38-1A0A0B4J264 116 aa11.36□□□□□ -0.59
VEGFA-201ENST00000230480 IGHV2-70DA0A0C4DH43 119 aa11.36□□□□□ -0.59
VEGFA-201ENST00000230480 IGKV1-12A0A0C4DH73 117 aa11.36□□□□□ -0.59
VEGFA-201ENST00000230480 DVL1O14640 695 aa11.36□□□□□ -0.59
VEGFA-201ENST00000230480 ADAM20O43506 726 aa11.36□□□□□ -0.59
VEGFA-201ENST00000230480 IGKV1D-12P01611 117 aa11.36□□□□□ -0.59
VEGFA-201ENST00000230480 ACAA1P09110 424 aaPredicted RBP11.36□□□□□ -0.59
VEGFA-201ENST00000230480 UBCP0CG48 685 aaKnown RBP11.36□□□□□ -0.59
VEGFA-201ENST00000230480 PSG2P11465 335 aa11.36□□□□□ -0.59
VEGFA-201ENST00000230480 PIPP12273 146 aaPredicted RBP11.36□□□□□ -0.59
VEGFA-201ENST00000230480 IRF2P14316 349 aa11.36□□□□□ -0.59
VEGFA-201ENST00000230480 MMP9P14780 707 aa11.36□□□□□ -0.59
VEGFA-201ENST00000230480 MUC1P15941 1255 aaPredicted RBP11.36□□□□□ -0.59
VEGFA-201ENST00000230480 GMFBP60983 142 aa11.36□□□□□ -0.59
VEGFA-201ENST00000230480 DGUOKQ16854 277 aa11.36□□□□□ -0.59
VEGFA-201ENST00000230480 C6orf141Q5SZD1 244 aa11.36□□□□□ -0.59
VEGFA-201ENST00000230480 TMEM244Q5VVB8 128 aa11.36□□□□□ -0.59
VEGFA-201ENST00000230480 DCAF12L2Q5VW00 463 aa11.36□□□□□ -0.59
VEGFA-201ENST00000230480 KCTD8Q6ZWB6 473 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms