RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 R4GMQ9 66 aa12.4□□□□□ -0.42
SF1-201ENST00000227503 CHD3Q12873 2000 aaKnown RBP12.4□□□□□ -0.42
SF1-201ENST00000227503 IGLV1-36A0A0B4J1U3 117 aa12.4□□□□□ -0.42
SF1-201ENST00000227503 IGKV1D-43A0A0B4J1Z2 117 aa12.4□□□□□ -0.42
SF1-201ENST00000227503 MEGF11A6BM72 1044 aa12.4□□□□□ -0.42
SF1-201ENST00000227503 IGLV3-19P01714 112 aa12.4□□□□□ -0.42
SF1-201ENST00000227503 FASLGP48023 281 aa12.4□□□□□ -0.42
SF1-201ENST00000227503 BLKP51451 505 aa12.4□□□□□ -0.42
SF1-201ENST00000227503 GFERP55789 205 aa12.4□□□□□ -0.42
SF1-201ENST00000227503 GGNBP1Q5YKI7 109 aa12.4□□□□□ -0.42
SF1-201ENST00000227503 ZFP62Q8NB50 900 aaPredicted RBP12.4□□□□□ -0.42
SF1-201ENST00000227503 FNDC9Q8TBE3 224 aa12.4□□□□□ -0.42
SF1-201ENST00000227503 TSLPQ969D9 159 aa12.4□□□□□ -0.42
SF1-201ENST00000227503 S100A13Q99584 98 aa12.4□□□□□ -0.42
SF1-201ENST00000227503 TRAV36DV7A0A075B6V5 113 aa12.4□□□□□ -0.43
SF1-201ENST00000227503 SHISA7A6NL88 538 aa12.4□□□□□ -0.43
SF1-201ENST00000227503 ZNF705GA8MUZ8 300 aaPredicted RBP12.4□□□□□ -0.43
SF1-201ENST00000227503 HCRTR2O43614 444 aa12.4□□□□□ -0.43
SF1-201ENST00000227503 DDAH2O95865 285 aa12.4□□□□□ -0.43
SF1-201ENST00000227503 PGA4P0DJD7 388 aa12.4□□□□□ -0.43
SF1-201ENST00000227503 PGA5P0DJD9 388 aa12.4□□□□□ -0.43
SF1-201ENST00000227503 CXCR1P25024 350 aa12.4□□□□□ -0.43
SF1-201ENST00000227503 FPR2P25090 351 aa12.4□□□□□ -0.43
SF1-201ENST00000227503 ZNF93P35789 620 aaPredicted RBP12.4□□□□□ -0.43
SF1-201ENST00000227503 SLC6A8P48029 635 aa12.4□□□□□ -0.43
SF1-201ENST00000227503 AKR1C8PQ5T2L2 129 aa12.4□□□□□ -0.43
SF1-201ENST00000227503 OPN5Q6U736 354 aa12.4□□□□□ -0.43
SF1-201ENST00000227503 C5orf24Q7Z6I8 188 aa12.4□□□□□ -0.43
SF1-201ENST00000227503 DTWD2Q8NBA8 298 aa12.4□□□□□ -0.43
SF1-201ENST00000227503 GPR119Q8TDV5 335 aa12.4□□□□□ -0.43
SF1-201ENST00000227503 ZNF721Q8TF20 911 aa12.4□□□□□ -0.43
SF1-201ENST00000227503 KLHDC7BQ96G42 594 aa12.4□□□□□ -0.43
SF1-201ENST00000227503 KIAA2026Q5HYC2 2103 aa12.39□□□□□ -0.43
SF1-201ENST00000227503 IFNL4K9M1U5 179 aa12.39□□□□□ -0.43
SF1-201ENST00000227503 CRTAPO75718 401 aaPredicted RBP12.39□□□□□ -0.43
SF1-201ENST00000227503 RBMXP38159 391 aaKnown RBP12.39□□□□□ -0.43
SF1-201ENST00000227503 NOVA1P51513 510 aaKnown RBP12.39□□□□□ -0.43
SF1-201ENST00000227503 SNU13P55769 128 aaKnown RBP12.39□□□□□ -0.43
SF1-201ENST00000227503 CYB561D1Q8N8Q1 229 aa12.39□□□□□ -0.43
SF1-201ENST00000227503 ZNF519Q8TB69 540 aa12.39□□□□□ -0.43
SF1-201ENST00000227503 C8orf33Q9H7E9 229 aaPredicted RBP12.39□□□□□ -0.43
SF1-201ENST00000227503 SRSF10O75494 262 aaKnown RBP12.39□□□□□ -0.43
SF1-201ENST00000227503 SCAF4O95104 1147 aaKnown RBP12.39□□□□□ -0.43
SF1-201ENST00000227503 MBPP02686 304 aaPredicted RBP12.39□□□□□ -0.43
SF1-201ENST00000227503 ROM1Q03395 351 aa12.39□□□□□ -0.43
SF1-201ENST00000227503 NKAIN1Q4KMZ8 207 aa12.39□□□□□ -0.43
SF1-201ENST00000227503 ZNF664Q8N3J9 261 aa12.39□□□□□ -0.43
SF1-201ENST00000227503 HIST1H2BLQ99880 126 aa12.39□□□□□ -0.43
SF1-201ENST00000227503 C2orf88Q9BSF0 95 aa12.39□□□□□ -0.43
SF1-201ENST00000227503 UCK1Q9HA47 277 aa12.39□□□□□ -0.43
SF1-201ENST00000227503 ZNF701Q9NV72 531 aaPredicted RBP12.39□□□□□ -0.43
SF1-201ENST00000227503 SOHLH2Q9NX45 425 aa12.39□□□□□ -0.43
SF1-201ENST00000227503 HSF4Q9ULV5 492 aa12.39□□□□□ -0.43
SF1-201ENST00000227503 IGKV3D-11A0A0A0MRZ8 115 aa12.38□□□□□ -0.43
SF1-201ENST00000227503 CCDC163A0A0D9SF12 145 aa12.38□□□□□ -0.43
SF1-201ENST00000227503 A0A1W2PPC4 97 aa12.38□□□□□ -0.43
SF1-201ENST00000227503 SYT7O43581 403 aa12.38□□□□□ -0.43
SF1-201ENST00000227503 OMGP23515 440 aa12.38□□□□□ -0.43
SF1-201ENST00000227503 EFNA3P52797 238 aa12.38□□□□□ -0.43
SF1-201ENST00000227503 C1orf140Q5VVS0 124 aa12.38□□□□□ -0.43
SF1-201ENST00000227503 Q7L0L9 218 aa12.38□□□□□ -0.43
SF1-201ENST00000227503 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.38□□□□□ -0.43
SF1-201ENST00000227503 THRSPQ92748 146 aa12.38□□□□□ -0.43
SF1-201ENST00000227503 GAL3ST4Q96RP7 486 aa12.38□□□□□ -0.43
SF1-201ENST00000227503 HDHD3Q9BSH5 251 aaPredicted RBP12.38□□□□□ -0.43
SF1-201ENST00000227503 MRPL37Q9BZE1 423 aaKnown RBP12.38□□□□□ -0.43
SF1-201ENST00000227503 ZNF700Q9H0M5 742 aa12.38□□□□□ -0.43
SF1-201ENST00000227503 MEMO1Q9Y316 297 aa12.38□□□□□ -0.43
SF1-201ENST00000227503 A0A087WZY1 265 aa12.38□□□□□ -0.43
SF1-201ENST00000227503 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.38□□□□□ -0.43
SF1-201ENST00000227503 ZNF724A8MTY0 619 aa12.38□□□□□ -0.43
SF1-201ENST00000227503 TNFSF12O43508 249 aa12.38□□□□□ -0.43
SF1-201ENST00000227503 GAPDHP04406 335 aaKnown RBP12.38□□□□□ -0.43
SF1-201ENST00000227503 HIST1H1DP16402 221 aaKnown RBP12.38□□□□□ -0.43
SF1-201ENST00000227503 OR1D4P47884 311 aa12.38□□□□□ -0.43
SF1-201ENST00000227503 RPL27P61353 136 aaKnown RBP12.38□□□□□ -0.43
SF1-201ENST00000227503 RAB1AP62820 205 aa12.38□□□□□ -0.43
SF1-201ENST00000227503 SGCBQ16585 318 aa12.38□□□□□ -0.43
SF1-201ENST00000227503 MAMDC2Q7Z304 686 aaPredicted RBP12.38□□□□□ -0.43
SF1-201ENST00000227503 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.38□□□□□ -0.43
SF1-201ENST00000227503 SLC22A24Q8N4F4 322 aa12.38□□□□□ -0.43
SF1-201ENST00000227503 VSX1Q9NZR4 365 aaPredicted RBP12.38□□□□□ -0.43
SF1-201ENST00000227503 OSGIN2Q9Y236 505 aa12.38□□□□□ -0.43
SF1-201ENST00000227503 MMACHCQ9Y4U1 282 aa12.38□□□□□ -0.43
SF1-201ENST00000227503 SDK1Q7Z5N4 2213 aa12.37□□□□□ -0.43
SF1-201ENST00000227503 LILRA5A6NI73 299 aa12.37□□□□□ -0.43
SF1-201ENST00000227503 RND3P61587 244 aa12.37□□□□□ -0.43
SF1-201ENST00000227503 PEG10Q86TG7 708 aaKnown RBP12.37□□□□□ -0.43
SF1-201ENST00000227503 NKAIN3Q8N8D7 197 aa12.37□□□□□ -0.43
SF1-201ENST00000227503 SLC25A31Q9H0C2 315 aa12.37□□□□□ -0.43
SF1-201ENST00000227503 DUSP15Q9H1R2 295 aaPredicted RBP12.37□□□□□ -0.43
SF1-201ENST00000227503 B3GALT5Q9Y2C3 310 aa12.37□□□□□ -0.43
SF1-201ENST00000227503 MRPS28Q9Y2Q9 187 aaKnown RBP12.37□□□□□ -0.43
SF1-201ENST00000227503 THADAQ6YHU6 1953 aa12.37□□□□□ -0.43
SF1-201ENST00000227503 SMCO3A2RU48 225 aa12.37□□□□□ -0.43
SF1-201ENST00000227503 TMEM150CB9EJG8 249 aa12.37□□□□□ -0.43
SF1-201ENST00000227503 ZNF878C9JN71 531 aa12.37□□□□□ -0.43
SF1-201ENST00000227503 HSD17B6O14756 317 aa12.37□□□□□ -0.43
SF1-201ENST00000227503 TSPAN2O60636 221 aa12.37□□□□□ -0.43
SF1-201ENST00000227503 NPIPB7O75200 414 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms