RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 LHX9Q9NQ69 397 aa10.25□□□□□ -0.77
NOD1-201ENST00000222823 CASP8AP2Q9UKL3 1982 aa10.25□□□□□ -0.77
NOD1-201ENST00000222823 ADRB1P08588 477 aa10.25□□□□□ -0.77
NOD1-201ENST00000222823 RPS16P62249 146 aaKnown RBP10.25□□□□□ -0.77
NOD1-201ENST00000222823 ERHP84090 104 aaKnown RBP10.25□□□□□ -0.77
NOD1-201ENST00000222823 KIAA0141Q14154 515 aaPredicted RBP10.25□□□□□ -0.77
NOD1-201ENST00000222823 DMKNQ6E0U4 476 aaPredicted RBP10.25□□□□□ -0.77
NOD1-201ENST00000222823 ZFP62Q8NB50 900 aaPredicted RBP10.25□□□□□ -0.77
NOD1-201ENST00000222823 UBALD1Q8TB05 177 aa10.25□□□□□ -0.77
NOD1-201ENST00000222823 SP7Q8TDD2 431 aaPredicted RBP10.25□□□□□ -0.77
NOD1-201ENST00000222823 HGDQ93099 445 aa10.25□□□□□ -0.77
NOD1-201ENST00000222823 MRPS18AQ9NVS2 196 aaKnown RBP10.25□□□□□ -0.77
NOD1-201ENST00000222823 PSENENQ9NZ42 101 aa10.25□□□□□ -0.77
NOD1-201ENST00000222823 TRPM7Q96QT4 1865 aa10.24□□□□□ -0.77
NOD1-201ENST00000222823 A0A1W2PQF6 199 aa10.24□□□□□ -0.77
NOD1-201ENST00000222823 CTAG2O75638 210 aa10.24□□□□□ -0.77
NOD1-201ENST00000222823 RAC3P60763 192 aa10.24□□□□□ -0.77
NOD1-201ENST00000222823 FLI1Q01543 452 aaPredicted RBP10.24□□□□□ -0.77
NOD1-201ENST00000222823 ZNF239Q16600 458 aaKnown RBP10.24□□□□□ -0.77
NOD1-201ENST00000222823 ATG4DQ86TL0 474 aaPredicted RBP10.24□□□□□ -0.77
NOD1-201ENST00000222823 Q8IYB0 196 aa10.24□□□□□ -0.77
NOD1-201ENST00000222823 D2HGDHQ8N465 521 aa10.24□□□□□ -0.77
NOD1-201ENST00000222823 ZDHHC22Q8N966 263 aa10.24□□□□□ -0.77
NOD1-201ENST00000222823 LSM2Q9Y333 95 aaKnown RBP10.24□□□□□ -0.77
NOD1-201ENST00000222823 TMEM272A0A1B0GTI8 110 aa10.24□□□□□ -0.77
NOD1-201ENST00000222823 CLEC18AA5D8T8 446 aa10.24□□□□□ -0.77
NOD1-201ENST00000222823 HRKO00198 91 aa10.24□□□□□ -0.77
NOD1-201ENST00000222823 CST7O76096 145 aa10.24□□□□□ -0.77
NOD1-201ENST00000222823 CLEC3BP05452 202 aa10.24□□□□□ -0.77
NOD1-201ENST00000222823 PATE4P0C8F1 98 aa10.24□□□□□ -0.77
NOD1-201ENST00000222823 CD96P40200 585 aa10.24□□□□□ -0.77
NOD1-201ENST00000222823 MEOX1P50221 254 aa10.24□□□□□ -0.77
NOD1-201ENST00000222823 GFRALQ6UXV0 394 aa10.24□□□□□ -0.77
NOD1-201ENST00000222823 LRRTM1Q86UE6 522 aa10.24□□□□□ -0.77
NOD1-201ENST00000222823 C20orf196Q8IYI0 205 aa10.24□□□□□ -0.77
NOD1-201ENST00000222823 CLEC18CQ8NCF0 446 aa10.24□□□□□ -0.77
NOD1-201ENST00000222823 SMRP1Q8NCR6 262 aa10.24□□□□□ -0.77
NOD1-201ENST00000222823 IER2Q9BTL4 223 aa10.24□□□□□ -0.77
NOD1-201ENST00000222823 ACTR3CQ9C0K3 210 aaPredicted RBP10.24□□□□□ -0.77
NOD1-201ENST00000222823 MRM2Q9UI43 246 aaKnown RBP10.24□□□□□ -0.77
NOD1-201ENST00000222823 CKAP5Q14008 2032 aa10.24□□□□□ -0.77
NOD1-201ENST00000222823 AQP7P3A6NL99 342 aa10.24□□□□□ -0.77
NOD1-201ENST00000222823 DCTN6O00399 190 aa10.24□□□□□ -0.77
NOD1-201ENST00000222823 PDGFBP01127 241 aaPredicted RBP10.24□□□□□ -0.77
NOD1-201ENST00000222823 OR5G3P0C626 314 aa10.24□□□□□ -0.77
NOD1-201ENST00000222823 CCL4P13236 92 aa10.24□□□□□ -0.77
NOD1-201ENST00000222823 COX5AP20674 150 aa10.24□□□□□ -0.77
NOD1-201ENST00000222823 ZNF75AQ96N20 296 aa10.24□□□□□ -0.77
NOD1-201ENST00000222823 OR5H15A6NDH6 313 aa10.23□□□□□ -0.77
NOD1-201ENST00000222823 RFPL4AA6NLU0 287 aa10.23□□□□□ -0.77
NOD1-201ENST00000222823 RFPL4AL1F8VTS6 287 aa10.23□□□□□ -0.77
NOD1-201ENST00000222823 KRASP01116 189 aa10.23□□□□□ -0.77
NOD1-201ENST00000222823 ZBTB25P24278 435 aa10.23□□□□□ -0.77
NOD1-201ENST00000222823 SLC37A1P57057 533 aa10.23□□□□□ -0.77
NOD1-201ENST00000222823 UBE2G1P62253 170 aa10.23□□□□□ -0.77
NOD1-201ENST00000222823 PRDX4Q13162 271 aa10.23□□□□□ -0.77
NOD1-201ENST00000222823 DHRS2Q13268 280 aa10.23□□□□□ -0.77
NOD1-201ENST00000222823 C11orf87Q6NUJ2 197 aa10.23□□□□□ -0.77
NOD1-201ENST00000222823 SLC38A6Q8IZM9 456 aa10.23□□□□□ -0.77
NOD1-201ENST00000222823 DEFB124Q8NES8 71 aa10.23□□□□□ -0.77
NOD1-201ENST00000222823 OR5AP2Q8NGF4 316 aa10.23□□□□□ -0.77
NOD1-201ENST00000222823 OR6X1Q8NH79 312 aa10.23□□□□□ -0.77
NOD1-201ENST00000222823 PINX1Q96BK5 328 aaKnown RBP10.23□□□□□ -0.77
NOD1-201ENST00000222823 FBXO17Q96EF6 278 aa10.23□□□□□ -0.77
NOD1-201ENST00000222823 ADAT1Q9BUB4 502 aaKnown RBP10.23□□□□□ -0.77
NOD1-201ENST00000222823 FSCN3Q9NQT6 498 aa10.23□□□□□ -0.77
NOD1-201ENST00000222823 A0A1W2PQD3 144 aa10.23□□□□□ -0.77
NOD1-201ENST00000222823 TMEM30CPA0ZSE6 113 aa10.23□□□□□ -0.77
NOD1-201ENST00000222823 SPRY3O43610 288 aa10.23□□□□□ -0.77
NOD1-201ENST00000222823 TNFRSF1AP19438 455 aa10.23□□□□□ -0.77
NOD1-201ENST00000222823 FPR2P25090 351 aa10.23□□□□□ -0.77
NOD1-201ENST00000222823 GALNSP34059 522 aa10.23□□□□□ -0.77
NOD1-201ENST00000222823 TAS2R45P59539 299 aa10.23□□□□□ -0.77
NOD1-201ENST00000222823 TAGLNQ01995 201 aaKnown RBP10.23□□□□□ -0.77
NOD1-201ENST00000222823 JMJD6Q6NYC1 403 aaPredicted RBP10.23□□□□□ -0.77
NOD1-201ENST00000222823 WDR74Q6RFH5 385 aaPredicted RBP10.23□□□□□ -0.77
NOD1-201ENST00000222823 CXorf67Q86X51 503 aaPredicted RBP10.23□□□□□ -0.77
NOD1-201ENST00000222823 FAM58AQ8N1B3 248 aa10.23□□□□□ -0.77
NOD1-201ENST00000222823 PLPPR2Q96GM1 343 aa10.23□□□□□ -0.77
NOD1-201ENST00000222823 SARGQ9BW04 601 aa10.23□□□□□ -0.77
NOD1-201ENST00000222823 KIAA1456Q9P272 454 aa10.23□□□□□ -0.77
NOD1-201ENST00000222823 A0A1W2PR80 420 aa10.23□□□□□ -0.77
NOD1-201ENST00000222823 C20orf202A1L168 122 aa10.23□□□□□ -0.77
NOD1-201ENST00000222823 BCL2L11O43521 198 aa10.23□□□□□ -0.77
NOD1-201ENST00000222823 AQP8O94778 261 aa10.23□□□□□ -0.77
NOD1-201ENST00000222823 NTN1O95631 604 aa10.23□□□□□ -0.77
NOD1-201ENST00000222823 MBP02144 154 aa10.23□□□□□ -0.77
NOD1-201ENST00000222823 ACSM4P0C7M7 580 aa10.23□□□□□ -0.77
NOD1-201ENST00000222823 RPL11P62913 178 aaKnown RBP10.23□□□□□ -0.77
NOD1-201ENST00000222823 LSM11P83369 360 aaKnown RBP eCLIP10.23□□□□□ -0.77
NOD1-201ENST00000222823 FOXC1Q12948 553 aa10.23□□□□□ -0.77
NOD1-201ENST00000222823 NPEPL1Q8NDH3 523 aa10.23□□□□□ -0.77
NOD1-201ENST00000222823 RPUSD4Q96CM3 377 aaKnown RBP10.23□□□□□ -0.77
NOD1-201ENST00000222823 FAAP24Q9BTP7 215 aa10.23□□□□□ -0.77
NOD1-201ENST00000222823 OCIAD1Q9NX40 245 aa10.23□□□□□ -0.77
NOD1-201ENST00000222823 TRGV10A0A0A0MS01 117 aa10.23□□□□□ -0.77
NOD1-201ENST00000222823 MASP2O00187 686 aa10.23□□□□□ -0.77
NOD1-201ENST00000222823 OR7C2O60412 319 aa10.23□□□□□ -0.77
NOD1-201ENST00000222823 OR2C1O95371 312 aa10.23□□□□□ -0.77
NOD1-201ENST00000222823 CA6P23280 308 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms