RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 SNAPC3Q92966 411 aa15□□□□□ -0.01
VRK1-201ENST00000216639 GPR137Q96N19 417 aa15□□□□□ -0.01
VRK1-201ENST00000216639 PROCRQ9UNN8 238 aa15□□□□□ -0.01
VRK1-201ENST00000216639 MPC1Q9Y5U8 109 aa15□□□□□ -0.01
VRK1-201ENST00000216639 MBD3L4A6NDZ8 208 aaPredicted RBP14.99□□□□□ -0.01
VRK1-201ENST00000216639 MBD3L3A6NE82 208 aaPredicted RBP14.99□□□□□ -0.01
VRK1-201ENST00000216639 MBD3L5A6NJ08 208 aaPredicted RBP14.99□□□□□ -0.01
VRK1-201ENST00000216639 WDR1O75083 606 aa14.99□□□□□ -0.01
VRK1-201ENST00000216639 OR4E1P0C645 316 aa14.99□□□□□ -0.01
VRK1-201ENST00000216639 TAF9Q16594 264 aa14.99□□□□□ -0.01
VRK1-201ENST00000216639 MICBQ29980 383 aa14.99□□□□□ -0.01
VRK1-201ENST00000216639 ATPAF1Q5TC12 328 aaPredicted RBP14.99□□□□□ -0.01
VRK1-201ENST00000216639 SEZ6L2Q6UXD5 910 aa14.99□□□□□ -0.01
VRK1-201ENST00000216639 TMEM17Q86X19 198 aa14.99□□□□□ -0.01
VRK1-201ENST00000216639 MED12LQ86YW9 2145 aa14.99□□□□□ -0.01
VRK1-201ENST00000216639 NAXEQ8NCW5 288 aa14.99□□□□□ -0.01
VRK1-201ENST00000216639 OR5A2Q8NGI9 324 aa14.99□□□□□ -0.01
VRK1-201ENST00000216639 OR52B4Q8NGK2 314 aa14.99□□□□□ -0.01
VRK1-201ENST00000216639 MBD3L2Q8NHZ7 208 aaPredicted RBP14.99□□□□□ -0.01
VRK1-201ENST00000216639 ST6GALNAC5Q9BVH7 336 aa14.99□□□□□ -0.01
VRK1-201ENST00000216639 SCNM1Q9BWG6 230 aa14.99□□□□□ -0.01
VRK1-201ENST00000216639 DLL4Q9NR61 685 aa14.99□□□□□ -0.01
VRK1-201ENST00000216639 LHX6Q9UPM6 363 aa14.99□□□□□ -0.01
VRK1-201ENST00000216639 ZNF292O60281 2723 aa14.98□□□□□ -0.01
VRK1-201ENST00000216639 IGKV1-12A0A0C4DH73 117 aa14.98□□□□□ -0.01
VRK1-201ENST00000216639 IGKV1D-12P01611 117 aa14.98□□□□□ -0.01
VRK1-201ENST00000216639 CRHP06850 196 aa14.98□□□□□ -0.01
VRK1-201ENST00000216639 SPINK2P20155 84 aa14.98□□□□□ -0.01
VRK1-201ENST00000216639 OR3A3P47888 321 aa14.98□□□□□ -0.01
VRK1-201ENST00000216639 IDH3GP51553 393 aaPredicted RBP14.98□□□□□ -0.01
VRK1-201ENST00000216639 SNU13P55769 128 aaKnown RBP14.98□□□□□ -0.01
VRK1-201ENST00000216639 KRTCAP3Q53RY4 240 aa14.98□□□□□ -0.01
VRK1-201ENST00000216639 RFPL4BQ6ZWI9 263 aa14.98□□□□□ -0.01
VRK1-201ENST00000216639 SLC25A26Q70HW3 274 aa14.98□□□□□ -0.01
VRK1-201ENST00000216639 C6orf201Q7Z4U5 140 aa14.98□□□□□ -0.01
VRK1-201ENST00000216639 DKK4Q9UBT3 224 aa14.98□□□□□ -0.01
VRK1-201ENST00000216639 ST3GAL6Q9Y274 331 aa14.98□□□□□ -0.01
VRK1-201ENST00000216639 SSUH2Q9Y2M2 353 aa14.98□□□□□ -0.01
VRK1-201ENST00000216639 RTTNQ86VV8 2226 aa14.98□□□□□ -0.01
VRK1-201ENST00000216639 MUC6Q6W4X9 2439 aa14.98□□□□□ -0.01
VRK1-201ENST00000216639 FIGNL2A6NMB9 653 aa14.97□□□□□ -0.01
VRK1-201ENST00000216639 GIPP09681 153 aaPredicted RBP14.97□□□□□ -0.01
VRK1-201ENST00000216639 CBR1P16152 277 aa14.97□□□□□ -0.01
VRK1-201ENST00000216639 GPM6AP51674 278 aa14.97□□□□□ -0.01
VRK1-201ENST00000216639 TSPAN5P62079 268 aa14.97□□□□□ -0.01
VRK1-201ENST00000216639 NHLH1Q02575 133 aa14.97□□□□□ -0.01
VRK1-201ENST00000216639 PLEKHN1Q494U1 663 aaPredicted RBP14.97□□□□□ -0.01
VRK1-201ENST00000216639 FAM180AQ6UWF9 173 aa14.97□□□□□ -0.01
VRK1-201ENST00000216639 NLRC3Q7RTR2 1065 aa14.97□□□□□ -0.01
VRK1-201ENST00000216639 CALHM1Q8IU99 346 aa14.97□□□□□ -0.01
VRK1-201ENST00000216639 MKXQ8IYA7 352 aa14.97□□□□□ -0.01
VRK1-201ENST00000216639 FBXL14Q8N1E6 418 aa14.97□□□□□ -0.01
VRK1-201ENST00000216639 MUC20Q8N307 709 aaPredicted RBP14.97□□□□□ -0.01
VRK1-201ENST00000216639 C17orf78Q8N4C9 275 aa14.97□□□□□ -0.01
VRK1-201ENST00000216639 EMG1Q92979 244 aaKnown RBP14.97□□□□□ -0.01
VRK1-201ENST00000216639 TMEM246Q9BRR3 403 aa14.97□□□□□ -0.01
VRK1-201ENST00000216639 CHST6Q9GZX3 395 aa14.97□□□□□ -0.01
VRK1-201ENST00000216639 OR51B6Q9H340 312 aa14.97□□□□□ -0.01
VRK1-201ENST00000216639 EDARQ9UNE0 448 aa14.97□□□□□ -0.01
VRK1-201ENST00000216639 ZFHX2Q9C0A1 2572 aaPredicted RBP14.97□□□□□ -0.01
VRK1-201ENST00000216639 ZNF732B4DXR9 585 aa14.97□□□□□ -0.01
VRK1-201ENST00000216639 RGS13O14921 159 aa14.97□□□□□ -0.01
VRK1-201ENST00000216639 GFRA3O60609 400 aa14.97□□□□□ -0.01
VRK1-201ENST00000216639 TPOP07202 933 aa14.97□□□□□ -0.01
VRK1-201ENST00000216639 DNASE1P24855 282 aa14.97□□□□□ -0.01
VRK1-201ENST00000216639 HAAOP46952 286 aa14.97□□□□□ -0.01
VRK1-201ENST00000216639 IFITM2Q01629 132 aa14.97□□□□□ -0.01
VRK1-201ENST00000216639 FOXF2Q12947 444 aa14.97□□□□□ -0.01
VRK1-201ENST00000216639 P2RY6Q15077 328 aa14.97□□□□□ -0.01
VRK1-201ENST00000216639 CHRFAM7AQ494W8 412 aa14.97□□□□□ -0.01
VRK1-201ENST00000216639 UNQ6126/PRO20091Q6UXV3 157 aa14.97□□□□□ -0.01
VRK1-201ENST00000216639 TMEM200AQ86VY9 491 aa14.97□□□□□ -0.01
VRK1-201ENST00000216639 OR2AK2Q8NG84 335 aa14.97□□□□□ -0.01
VRK1-201ENST00000216639 TERB2Q8NHR7 220 aa14.97□□□□□ -0.01
VRK1-201ENST00000216639 HPSE2Q8WWQ2 592 aa14.97□□□□□ -0.01
VRK1-201ENST00000216639 SCGB3A2Q96PL1 93 aa14.97□□□□□ -0.01
VRK1-201ENST00000216639 SLA2Q9H6Q3 261 aa14.97□□□□□ -0.01
VRK1-201ENST00000216639 OBP2BQ9NPH6 170 aa14.97□□□□□ -0.01
VRK1-201ENST00000216639 ZNF701Q9NV72 531 aaPredicted RBP14.97□□□□□ -0.01
VRK1-201ENST00000216639 A0A1W2PR80 420 aa14.96□□□□□ -0.01
VRK1-201ENST00000216639 OR5B21A6NL26 309 aa14.96□□□□□ -0.01
VRK1-201ENST00000216639 PRSS44E7EML9 344 aa14.96□□□□□ -0.01
VRK1-201ENST00000216639 H3BUI4 141 aa14.96□□□□□ -0.01
VRK1-201ENST00000216639 GEMIN2O14893 280 aaKnown RBP14.96□□□□□ -0.01
VRK1-201ENST00000216639 SMPD2O60906 423 aa14.96□□□□□ -0.01
VRK1-201ENST00000216639 SFTPBP07988 381 aa14.96□□□□□ -0.01
VRK1-201ENST00000216639 GSTT2P0CG29 244 aa14.96□□□□□ -0.01
VRK1-201ENST00000216639 IL32P24001 234 aa14.96□□□□□ -0.01
VRK1-201ENST00000216639 RBM11P57052 281 aaKnown RBP14.96□□□□□ -0.01
VRK1-201ENST00000216639 RAP2BP61225 183 aa14.96□□□□□ -0.01
VRK1-201ENST00000216639 FAHD2BQ6P2I3 314 aaPredicted RBP14.96□□□□□ -0.01
VRK1-201ENST00000216639 FBXW12Q6X9E4 464 aa14.96□□□□□ -0.01
VRK1-201ENST00000216639 BEND4Q6ZU67 534 aa14.96□□□□□ -0.01
VRK1-201ENST00000216639 SPACA3Q8IXA5 215 aa14.96□□□□□ -0.01
VRK1-201ENST00000216639 ASCC1Q8N9N2 400 aaKnown RBP14.96□□□□□ -0.01
VRK1-201ENST00000216639 BHLHE23Q8NDY6 225 aa14.96□□□□□ -0.01
VRK1-201ENST00000216639 OR2T35Q8NGX2 323 aa14.96□□□□□ -0.01
VRK1-201ENST00000216639 OR5P3Q8WZ94 311 aa14.96□□□□□ -0.01
VRK1-201ENST00000216639 FAHD2AQ96GK7 314 aa14.96□□□□□ -0.01
VRK1-201ENST00000216639 PLSCR3Q9NRY6 295 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms