RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 PCGF3Q3KNV8 242 aa16.92■□□□□ 0.3
TNFRSF1A-201ENST00000162749 SPATA46Q5T0L3 261 aa16.92■□□□□ 0.3
TNFRSF1A-201ENST00000162749 MOB3CQ70IA8 216 aa16.92■□□□□ 0.3
TNFRSF1A-201ENST00000162749 BHLHE23Q8NDY6 225 aa16.92■□□□□ 0.3
TNFRSF1A-201ENST00000162749 CSNK2A3Q8NEV1 391 aa16.92■□□□□ 0.3
TNFRSF1A-201ENST00000162749 CPNE2Q96FN4 548 aaPredicted RBP16.92■□□□□ 0.3
TNFRSF1A-201ENST00000162749 CST11Q9H112 138 aa16.92■□□□□ 0.3
TNFRSF1A-201ENST00000162749 A0A1B0GUH1 482 aa16.92■□□□□ 0.3
TNFRSF1A-201ENST00000162749 MSTNO14793 375 aa16.92■□□□□ 0.3
TNFRSF1A-201ENST00000162749 PRAF2O60831 178 aa16.92■□□□□ 0.3
TNFRSF1A-201ENST00000162749 CRTAPO75718 401 aaPredicted RBP16.92■□□□□ 0.3
TNFRSF1A-201ENST00000162749 NDUFB6O95139 128 aa16.92■□□□□ 0.3
TNFRSF1A-201ENST00000162749 IGLV1-44P01699 117 aa16.92■□□□□ 0.3
TNFRSF1A-201ENST00000162749 IL32P24001 234 aa16.92■□□□□ 0.3
TNFRSF1A-201ENST00000162749 FTMTQ8N4E7 242 aa16.92■□□□□ 0.3
TNFRSF1A-201ENST00000162749 CMBLQ96DG6 245 aa16.92■□□□□ 0.3
TNFRSF1A-201ENST00000162749 RANBP3Q9H6Z4 567 aaPredicted RBP16.92■□□□□ 0.3
TNFRSF1A-201ENST00000162749 EIF3KQ9UBQ5 218 aaKnown RBP16.92■□□□□ 0.3
TNFRSF1A-201ENST00000162749 ZNF629Q9UEG4 869 aaPredicted RBP16.92■□□□□ 0.3
TNFRSF1A-201ENST00000162749 MGAT4AQ9UM21 535 aa16.92■□□□□ 0.3
TNFRSF1A-201ENST00000162749 SLC7A11Q9UPY5 501 aa16.92■□□□□ 0.3
TNFRSF1A-201ENST00000162749 A0A0A6YYD4 124 aa16.91■□□□□ 0.3
TNFRSF1A-201ENST00000162749 A8MXE2 369 aa16.91■□□□□ 0.3
TNFRSF1A-201ENST00000162749 CECR9P0C854 216 aa16.91■□□□□ 0.3
TNFRSF1A-201ENST00000162749 PRSS3P35030 304 aa16.91■□□□□ 0.3
TNFRSF1A-201ENST00000162749 PRDX4Q13162 271 aa16.91■□□□□ 0.3
TNFRSF1A-201ENST00000162749 OR4D10Q8NGI6 311 aa16.91■□□□□ 0.3
TNFRSF1A-201ENST00000162749 OR10K1Q8NGX5 313 aa16.91■□□□□ 0.3
TNFRSF1A-201ENST00000162749 GRPEL2Q8TAA5 225 aa16.91■□□□□ 0.3
TNFRSF1A-201ENST00000162749 S100PBPQ96BU1 408 aa16.91■□□□□ 0.3
TNFRSF1A-201ENST00000162749 FAM122AQ96E09 287 aa16.91■□□□□ 0.3
TNFRSF1A-201ENST00000162749 S100A13Q99584 98 aa16.91■□□□□ 0.3
TNFRSF1A-201ENST00000162749 SEC22CQ9BRL7 303 aa16.91■□□□□ 0.3
TNFRSF1A-201ENST00000162749 PRORYQ9H606 182 aa16.91■□□□□ 0.3
TNFRSF1A-201ENST00000162749 NPDC1Q9NQX5 325 aaPredicted RBP16.91■□□□□ 0.3
TNFRSF1A-201ENST00000162749 DLL4Q9NR61 685 aa16.91■□□□□ 0.3
TNFRSF1A-201ENST00000162749 ELF5Q9UKW6 265 aaPredicted RBP16.91■□□□□ 0.3
TNFRSF1A-201ENST00000162749 AMDHD2Q9Y303 409 aa16.91■□□□□ 0.3
TNFRSF1A-201ENST00000162749 SLC25A15Q9Y619 301 aa16.91■□□□□ 0.3
TNFRSF1A-201ENST00000162749 NPTNQ9Y639 398 aa16.91■□□□□ 0.3
TNFRSF1A-201ENST00000162749 TPD52L2O43399 206 aaKnown RBP16.9■□□□□ 0.3
TNFRSF1A-201ENST00000162749 LILRA1O75019 489 aa16.9■□□□□ 0.3
TNFRSF1A-201ENST00000162749 CST4P01036 141 aa16.9■□□□□ 0.3
TNFRSF1A-201ENST00000162749 SERPINA2P20848 420 aa16.9■□□□□ 0.3
TNFRSF1A-201ENST00000162749 RBPJQ06330 500 aa16.9■□□□□ 0.3
TNFRSF1A-201ENST00000162749 FBXW12Q6X9E4 464 aa16.9■□□□□ 0.3
TNFRSF1A-201ENST00000162749 OR4C16Q8NGL9 310 aa16.9■□□□□ 0.3
TNFRSF1A-201ENST00000162749 ZNF431Q8TF32 576 aaPredicted RBP16.9■□□□□ 0.3
TNFRSF1A-201ENST00000162749 CCDC120Q96HB5 630 aa16.9■□□□□ 0.3
TNFRSF1A-201ENST00000162749 DIDO1Q9BTC0 2240 aaKnown RBP16.9■□□□□ 0.3
TNFRSF1A-201ENST00000162749 MEIS3P1A6NDR6 274 aa16.9■□□□□ 0.3
TNFRSF1A-201ENST00000162749 EEF1E1-BLOC1S5C9J1V9 151 aa16.9■□□□□ 0.3
TNFRSF1A-201ENST00000162749 SPRY1O43609 319 aaPredicted RBP16.9■□□□□ 0.3
TNFRSF1A-201ENST00000162749 ANGPTL7O43827 346 aa16.9■□□□□ 0.3
TNFRSF1A-201ENST00000162749 SCGNO76038 276 aa16.9■□□□□ 0.3
TNFRSF1A-201ENST00000162749 PLATP00750 562 aa16.9■□□□□ 0.3
TNFRSF1A-201ENST00000162749 TMEM225BP0DP42 221 aa16.9■□□□□ 0.3
TNFRSF1A-201ENST00000162749 ZNF35P13682 527 aa16.9■□□□□ 0.3
TNFRSF1A-201ENST00000162749 ANXA7P20073 488 aaKnown RBP16.9■□□□□ 0.3
TNFRSF1A-201ENST00000162749 MECP2P51608 486 aaKnown RBP16.9■□□□□ 0.3
TNFRSF1A-201ENST00000162749 UCP2P55851 309 aa16.9■□□□□ 0.3
TNFRSF1A-201ENST00000162749 ERVS71-1P61550 626 aa16.9■□□□□ 0.3
TNFRSF1A-201ENST00000162749 PPP1CBP62140 327 aa16.9■□□□□ 0.3
TNFRSF1A-201ENST00000162749 METTL11BQ5VVY1 283 aa16.9■□□□□ 0.3
TNFRSF1A-201ENST00000162749 GLDNQ6ZMI3 551 aaPredicted RBP16.9■□□□□ 0.3
TNFRSF1A-201ENST00000162749 HPSE2Q8WWQ2 592 aa16.9■□□□□ 0.3
TNFRSF1A-201ENST00000162749 OR2J1Q9GZK6 312 aa16.9■□□□□ 0.3
TNFRSF1A-201ENST00000162749 MED19A0JLT2 244 aaPredicted RBP16.89■□□□□ 0.29
TNFRSF1A-201ENST00000162749 TMEM235A6NFC5 223 aa16.89■□□□□ 0.29
TNFRSF1A-201ENST00000162749 MGMTP16455 207 aa16.89■□□□□ 0.29
TNFRSF1A-201ENST00000162749 ATP1B3P54709 279 aa16.89■□□□□ 0.29
TNFRSF1A-201ENST00000162749 ZNF260Q3ZCT1 412 aa16.89■□□□□ 0.29
TNFRSF1A-201ENST00000162749 TIMM23BQ5SRD1 257 aa16.89■□□□□ 0.29
TNFRSF1A-201ENST00000162749 OR2T2Q6IF00 324 aa16.89■□□□□ 0.29
TNFRSF1A-201ENST00000162749 OR10R2Q8NGX6 335 aa16.89■□□□□ 0.29
TNFRSF1A-201ENST00000162749 GPX8Q8TED1 209 aa16.89■□□□□ 0.29
TNFRSF1A-201ENST00000162749 AQP3Q92482 292 aa16.89■□□□□ 0.29
TNFRSF1A-201ENST00000162749 SEH1LQ96EE3 360 aa16.89■□□□□ 0.29
TNFRSF1A-201ENST00000162749 NUDT16L1Q9BRJ7 211 aaKnown RBP16.89■□□□□ 0.29
TNFRSF1A-201ENST00000162749 ELL3Q9HB65 397 aaPredicted RBP16.89■□□□□ 0.29
TNFRSF1A-201ENST00000162749 SLC23A1Q9UHI7 598 aa16.89■□□□□ 0.29
TNFRSF1A-201ENST00000162749 ICE1Q9Y2F5 2266 aa16.89■□□□□ 0.29
TNFRSF1A-201ENST00000162749 IGHV1-18A0A0C4DH31 117 aa16.89■□□□□ 0.29
TNFRSF1A-201ENST00000162749 G3V3Q6 166 aa16.89■□□□□ 0.29
TNFRSF1A-201ENST00000162749 RPS27AP62979 156 aaKnown RBP16.89■□□□□ 0.29
TNFRSF1A-201ENST00000162749 CALHM1Q8IU99 346 aa16.89■□□□□ 0.29
TNFRSF1A-201ENST00000162749 ZDHHC23Q8IYP9 409 aa16.89■□□□□ 0.29
TNFRSF1A-201ENST00000162749 FAM169BQ8N8A8 192 aa16.89■□□□□ 0.29
TNFRSF1A-201ENST00000162749 ZNF436Q9C0F3 470 aaPredicted RBP16.89■□□□□ 0.29
TNFRSF1A-201ENST00000162749 FGF23Q9GZV9 251 aaPredicted RBP16.89■□□□□ 0.29
TNFRSF1A-201ENST00000162749 ANKRD34BA5PLL1 514 aa16.88■□□□□ 0.29
TNFRSF1A-201ENST00000162749 FCER2P06734 321 aa16.88■□□□□ 0.29
TNFRSF1A-201ENST00000162749 CHRM2P08172 466 aa16.88■□□□□ 0.29
TNFRSF1A-201ENST00000162749 CSF1P09603 554 aa16.88■□□□□ 0.29
TNFRSF1A-201ENST00000162749 MRGPRGQ86SM5 289 aa16.88■□□□□ 0.29
TNFRSF1A-201ENST00000162749 RTN4RL2Q86UN3 420 aa16.88■□□□□ 0.29
TNFRSF1A-201ENST00000162749 CHST4Q8NCG5 386 aa16.88■□□□□ 0.29
TNFRSF1A-201ENST00000162749 OR1J1Q8NGS3 322 aa16.88■□□□□ 0.29
TNFRSF1A-201ENST00000162749 DVL3Q92997 716 aaPredicted RBP16.88■□□□□ 0.29
TNFRSF1A-201ENST00000162749 URM1Q9BTM9 101 aaKnown RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms