RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 LRRC18Q8N456 261 aa12.12□□□□□ -0.47
PHGDH-233ENST00000642021 RHBDD1Q8TEB9 315 aa12.12□□□□□ -0.47
PHGDH-233ENST00000642021 RASL10BQ96S79 203 aa12.12□□□□□ -0.47
PHGDH-233ENST00000642021 SPSB2Q99619 263 aa12.12□□□□□ -0.47
PHGDH-233ENST00000642021 ELL3Q9HB65 397 aaPredicted RBP12.12□□□□□ -0.47
PHGDH-233ENST00000642021 ZNF160Q9HCG1 818 aa12.12□□□□□ -0.47
PHGDH-233ENST00000642021 RCC2Q9P258 522 aaKnown RBP12.12□□□□□ -0.47
PHGDH-233ENST00000642021 IGHV3-15A0A0B4J1V0 119 aa12.11□□□□□ -0.47
PHGDH-233ENST00000642021 FBXO24O75426 580 aa12.11□□□□□ -0.47
PHGDH-233ENST00000642021 CAV2P51636 162 aa12.11□□□□□ -0.47
PHGDH-233ENST00000642021 GRB2P62993 217 aaKnown RBP12.11□□□□□ -0.47
PHGDH-233ENST00000642021 ZNF528Q3MIS6 628 aa12.11□□□□□ -0.47
PHGDH-233ENST00000642021 CHRFAM7AQ494W8 412 aa12.11□□□□□ -0.47
PHGDH-233ENST00000642021 SPAG16Q8N0X2 631 aa12.11□□□□□ -0.47
PHGDH-233ENST00000642021 EMG1Q92979 244 aaKnown RBP12.11□□□□□ -0.47
PHGDH-233ENST00000642021 SHDQ96IW2 340 aa12.11□□□□□ -0.47
PHGDH-233ENST00000642021 ZNF385AQ96PM9 386 aaKnown RBP12.11□□□□□ -0.47
PHGDH-233ENST00000642021 LIME1Q9H400 295 aa12.11□□□□□ -0.47
PHGDH-233ENST00000642021 TAF9BQ9HBM6 251 aa12.11□□□□□ -0.47
PHGDH-233ENST00000642021 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.11□□□□□ -0.47
PHGDH-233ENST00000642021 MEX3AA1L020 520 aaKnown RBP12.11□□□□□ -0.47
PHGDH-233ENST00000642021 FIGNL2A6NMB9 653 aa12.11□□□□□ -0.47
PHGDH-233ENST00000642021 DKK1O94907 266 aa12.11□□□□□ -0.47
PHGDH-233ENST00000642021 CTSSP25774 331 aa12.11□□□□□ -0.47
PHGDH-233ENST00000642021 TAS2R46P59540 309 aa12.11□□□□□ -0.47
PHGDH-233ENST00000642021 IAH1Q2TAA2 248 aaPredicted RBP12.11□□□□□ -0.47
PHGDH-233ENST00000642021 SEMA6DQ8NFY4 1073 aa12.11□□□□□ -0.47
PHGDH-233ENST00000642021 DNAJB11Q9UBS4 358 aa12.11□□□□□ -0.47
PHGDH-233ENST00000642021 MTCH2Q9Y6C9 303 aa12.11□□□□□ -0.47
PHGDH-233ENST00000642021 NUDT19A8MXV4 375 aa12.1□□□□□ -0.47
PHGDH-233ENST00000642021 MED6O75586 246 aa12.1□□□□□ -0.47
PHGDH-233ENST00000642021 SNAPINO95295 136 aa12.1□□□□□ -0.47
PHGDH-233ENST00000642021 CELA2AP08217 269 aa12.1□□□□□ -0.47
PHGDH-233ENST00000642021 GABRR1P24046 479 aa12.1□□□□□ -0.47
PHGDH-233ENST00000642021 ALDH3B1P43353 468 aa12.1□□□□□ -0.47
PHGDH-233ENST00000642021 PRSS12P56730 875 aa12.1□□□□□ -0.47
PHGDH-233ENST00000642021 ENDOGQ14249 297 aaKnown RBP12.1□□□□□ -0.47
PHGDH-233ENST00000642021 SHBQ15464 509 aa12.1□□□□□ -0.47
PHGDH-233ENST00000642021 CLEC9AQ6UXN8 241 aa12.1□□□□□ -0.47
PHGDH-233ENST00000642021 RAB11FIP2Q7L804 512 aa12.1□□□□□ -0.47
PHGDH-233ENST00000642021 NECAB3Q96P71 396 aaPredicted RBP12.1□□□□□ -0.47
PHGDH-233ENST00000642021 ZNF2Q9BSG1 426 aaPredicted RBP12.1□□□□□ -0.47
PHGDH-233ENST00000642021 CRB3Q9BUF7 120 aa12.1□□□□□ -0.47
PHGDH-233ENST00000642021 CNTNAP3Q9BZ76 1288 aa12.1□□□□□ -0.47
PHGDH-233ENST00000642021 PIGLQ9Y2B2 252 aa12.1□□□□□ -0.47
PHGDH-233ENST00000642021 SDK2Q58EX2 2172 aa12.1□□□□□ -0.47
PHGDH-233ENST00000642021 RNASEK-C17orf49H0YIS7 233 aa12.1□□□□□ -0.47
PHGDH-233ENST00000642021 GDF9O60383 454 aa12.1□□□□□ -0.47
PHGDH-233ENST00000642021 CRYBA1P05813 215 aa12.1□□□□□ -0.47
PHGDH-233ENST00000642021 BEND4Q6ZU67 534 aa12.1□□□□□ -0.47
PHGDH-233ENST00000642021 SPACA9Q96E40 222 aaPredicted RBP12.1□□□□□ -0.47
PHGDH-233ENST00000642021 ZNF837Q96EG3 531 aaPredicted RBP12.1□□□□□ -0.47
PHGDH-233ENST00000642021 SAT2Q96F10 170 aaPredicted RBP12.1□□□□□ -0.47
PHGDH-233ENST00000642021 CMSS1Q9BQ75 279 aaKnown RBP12.1□□□□□ -0.47
PHGDH-233ENST00000642021 PARP12Q9H0J9 701 aaKnown RBP12.1□□□□□ -0.47
PHGDH-233ENST00000642021 ADAMTS20P59510 1910 aa12.1□□□□□ -0.47
PHGDH-233ENST00000642021 BCAT2O15382 392 aaPredicted RBP12.09□□□□□ -0.47
PHGDH-233ENST00000642021 DHRS3O75911 302 aa12.09□□□□□ -0.47
PHGDH-233ENST00000642021 FCGR3AP08637 254 aa12.09□□□□□ -0.47
PHGDH-233ENST00000642021 RFC3P40938 356 aa12.09□□□□□ -0.47
PHGDH-233ENST00000642021 RAB13P51153 203 aa12.09□□□□□ -0.47
PHGDH-233ENST00000642021 RRADP55042 308 aa12.09□□□□□ -0.47
PHGDH-233ENST00000642021 ZNF385CQ66K41 422 aaPredicted RBP12.09□□□□□ -0.47
PHGDH-233ENST00000642021 ETV3LQ6ZN32 361 aa12.09□□□□□ -0.47
PHGDH-233ENST00000642021 SLC16A14Q7RTX9 510 aa12.09□□□□□ -0.47
PHGDH-233ENST00000642021 FADS6Q8N9I5 356 aa12.09□□□□□ -0.47
PHGDH-233ENST00000642021 RXFP4Q8TDU9 374 aa12.09□□□□□ -0.47
PHGDH-233ENST00000642021 C2CD4CQ8TF44 421 aa12.09□□□□□ -0.47
PHGDH-233ENST00000642021 TM2D1Q9BX74 207 aa12.09□□□□□ -0.47
PHGDH-233ENST00000642021 SMIM3Q9BZL3 60 aa12.09□□□□□ -0.47
PHGDH-233ENST00000642021 PCDHGA1Q9Y5H4 931 aa12.09□□□□□ -0.47
PHGDH-233ENST00000642021 CHCHD2Q9Y6H1 151 aaPredicted RBP12.09□□□□□ -0.47
PHGDH-233ENST00000642021 V9GYS6 101 aa12.09□□□□□ -0.47
PHGDH-233ENST00000642021 A0A1W2PQM1 296 aa12.09□□□□□ -0.47
PHGDH-233ENST00000642021 SERPINE3A8MV23 424 aa12.09□□□□□ -0.47
PHGDH-233ENST00000642021 IFNA2P01563 188 aa12.09□□□□□ -0.47
PHGDH-233ENST00000642021 CD63P08962 238 aa12.09□□□□□ -0.47
PHGDH-233ENST00000642021 SFTA3P0C7M3 94 aa12.09□□□□□ -0.47
PHGDH-233ENST00000642021 SPP1P10451 314 aa12.09□□□□□ -0.47
PHGDH-233ENST00000642021 MSR1P21757 451 aa12.09□□□□□ -0.47
PHGDH-233ENST00000642021 RPL12P30050 165 aaKnown RBP12.09□□□□□ -0.47
PHGDH-233ENST00000642021 H3F3AP84243 136 aa12.09□□□□□ -0.47
PHGDH-233ENST00000642021 PDZK1IP1Q13113 114 aa12.09□□□□□ -0.47
PHGDH-233ENST00000642021 FAM189A2Q15884 450 aa12.09□□□□□ -0.47
PHGDH-233ENST00000642021 ZNF239Q16600 458 aaKnown RBP12.09□□□□□ -0.47
PHGDH-233ENST00000642021 TMEM268Q5VZI3 342 aa12.09□□□□□ -0.47
PHGDH-233ENST00000642021 BTNL8Q6UX41 500 aa12.09□□□□□ -0.47
PHGDH-233ENST00000642021 ZFP82Q8N141 532 aa12.09□□□□□ -0.47
PHGDH-233ENST00000642021 HAS2Q92819 552 aa12.09□□□□□ -0.47
PHGDH-233ENST00000642021 MRPL24Q96A35 216 aaKnown RBP12.09□□□□□ -0.47
PHGDH-233ENST00000642021 NABP1Q96AH0 204 aa12.09□□□□□ -0.47
PHGDH-233ENST00000642021 UCN2Q96RP3 112 aa12.09□□□□□ -0.47
PHGDH-233ENST00000642021 PIGQQ9BRB3 760 aa12.09□□□□□ -0.47
PHGDH-233ENST00000642021 GHRLQ9UBU3 117 aa12.09□□□□□ -0.47
PHGDH-233ENST00000642021 HDGFL3Q9Y3E1 203 aa12.09□□□□□ -0.47
PHGDH-233ENST00000642021 EML6Q6ZMW3 1958 aa12.08□□□□□ -0.47
PHGDH-233ENST00000642021 ANGPTL7O43827 346 aa12.08□□□□□ -0.48
PHGDH-233ENST00000642021 GLAP06280 429 aa12.08□□□□□ -0.48
PHGDH-233ENST00000642021 CD80P33681 288 aa12.08□□□□□ -0.48
PHGDH-233ENST00000642021 THBS4P35443 961 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms