RNA–Protein interactions for RNA: ENST00000641471.1

PPT1-215, Transcript of palmitoyl-protein thioesterase 1, human

BASIC

Gene PPT1, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPT1-215	ENST00000641471	FIGNL2	A6NMB9	653 aa		13.82	□□□□□ -0.2
PPT1-215	ENST00000641471	CA11	O75493	328 aa		13.82	□□□□□ -0.2
PPT1-215	ENST00000641471	MTRF1	O75570	445 aa	Known RBP	13.82	□□□□□ -0.2
PPT1-215	ENST00000641471	APOC1	P02654	83 aa		13.82	□□□□□ -0.2
PPT1-215	ENST00000641471	PTGER4	P35408	488 aa		13.82	□□□□□ -0.2
PPT1-215	ENST00000641471	RAB35	Q15286	201 aa		13.82	□□□□□ -0.2
PPT1-215	ENST00000641471	CHRFAM7A	Q494W8	412 aa		13.82	□□□□□ -0.2
PPT1-215	ENST00000641471	NSUN5P2	Q63ZY6	315 aa		13.82	□□□□□ -0.2
PPT1-215	ENST00000641471	PRSS54	Q6PEW0	395 aa		13.82	□□□□□ -0.2
PPT1-215	ENST00000641471	BOLL	Q8N9W6	283 aa	Known RBP	13.82	□□□□□ -0.2
PPT1-215	ENST00000641471	OR52H1	Q8NGJ2	320 aa		13.82	□□□□□ -0.2
PPT1-215	ENST00000641471		Q96M66	194 aa		13.82	□□□□□ -0.2
PPT1-215	ENST00000641471	NECAB3	Q96P71	396 aa	Predicted RBP	13.82	□□□□□ -0.2
PPT1-215	ENST00000641471	HDHD3	Q9BSH5	251 aa	Predicted RBP	13.82	□□□□□ -0.2
PPT1-215	ENST00000641471	ZNF701	Q9NV72	531 aa	Predicted RBP	13.82	□□□□□ -0.2
PPT1-215	ENST00000641471	ASF1B	Q9NVP2	202 aa		13.82	□□□□□ -0.2
PPT1-215	ENST00000641471	NUPL2	O15504	423 aa	Known RBP	13.81	□□□□□ -0.2
PPT1-215	ENST00000641471	SYNGR3	O43761	229 aa		13.81	□□□□□ -0.2
PPT1-215	ENST00000641471	GABRR1	P24046	479 aa		13.81	□□□□□ -0.2
PPT1-215	ENST00000641471	FOLR3	P41439	243 aa		13.81	□□□□□ -0.2
PPT1-215	ENST00000641471	YRDC	Q86U90	279 aa	Known RBP	13.81	□□□□□ -0.2
PPT1-215	ENST00000641471	POC1A	Q8NBT0	407 aa		13.81	□□□□□ -0.2
PPT1-215	ENST00000641471	CCDC54	Q8NEL0	328 aa		13.81	□□□□□ -0.2
PPT1-215	ENST00000641471	SLC30A7	Q8NEW0	376 aa		13.81	□□□□□ -0.2
PPT1-215	ENST00000641471	OR51F2	Q8NH61	342 aa		13.81	□□□□□ -0.2
PPT1-215	ENST00000641471	SGCE	O43556	437 aa		13.81	□□□□□ -0.2
PPT1-215	ENST00000641471	TPT1	P13693	172 aa	Known RBP	13.81	□□□□□ -0.2
PPT1-215	ENST00000641471	ZNF774	Q6NX45	483 aa		13.81	□□□□□ -0.2
PPT1-215	ENST00000641471	DRAM2	Q6UX65	266 aa		13.81	□□□□□ -0.2
PPT1-215	ENST00000641471	GGN	Q86UU5	652 aa		13.81	□□□□□ -0.2
PPT1-215	ENST00000641471	GPR137C	Q8N3F9	429 aa		13.81	□□□□□ -0.2
PPT1-215	ENST00000641471	SEMA6D	Q8NFY4	1073 aa		13.81	□□□□□ -0.2
PPT1-215	ENST00000641471	EMG1	Q92979	244 aa	Known RBP	13.81	□□□□□ -0.2
PPT1-215	ENST00000641471	IER2	Q9BTL4	223 aa		13.81	□□□□□ -0.2
PPT1-215	ENST00000641471	SF3B5	Q9BWJ5	86 aa	Known RBP	13.81	□□□□□ -0.2
PPT1-215	ENST00000641471	IGKV1-27	A0A075B6S5	117 aa		13.8	□□□□□ -0.2
PPT1-215	ENST00000641471	CCDC187	A0A096LP49	1063 aa		13.8	□□□□□ -0.2
PPT1-215	ENST00000641471	PMS2P1	A4D2B8	440 aa		13.8	□□□□□ -0.2
PPT1-215	ENST00000641471	DHRS7C	A6NNS2	312 aa		13.8	□□□□□ -0.2
PPT1-215	ENST00000641471	CDK2AP1	O14519	115 aa		13.8	□□□□□ -0.2
PPT1-215	ENST00000641471	PDGFB	P01127	241 aa	Predicted RBP	13.8	□□□□□ -0.2
PPT1-215	ENST00000641471	PRSS12	P56730	875 aa		13.8	□□□□□ -0.2
PPT1-215	ENST00000641471	RAC3	P60763	192 aa		13.8	□□□□□ -0.2
PPT1-215	ENST00000641471	NAAA	Q02083	359 aa		13.8	□□□□□ -0.2
PPT1-215	ENST00000641471	IL15RA	Q13261	267 aa		13.8	□□□□□ -0.2
PPT1-215	ENST00000641471	NKAPL	Q5M9Q1	402 aa		13.8	□□□□□ -0.2
PPT1-215	ENST00000641471	SULF2	Q8IWU5	870 aa		13.8	□□□□□ -0.2
PPT1-215	ENST00000641471	BAP18	Q8IXM2	172 aa		13.8	□□□□□ -0.2
PPT1-215	ENST00000641471	LRRC46	Q96FV0	321 aa		13.8	□□□□□ -0.2
PPT1-215	ENST00000641471	C2orf50	Q96LR7	162 aa		13.8	□□□□□ -0.2
PPT1-215	ENST00000641471	PIGM	Q9H3S5	423 aa		13.8	□□□□□ -0.2
PPT1-215	ENST00000641471	GJE1	A6NN92	205 aa		13.8	□□□□□ -0.2
PPT1-215	ENST00000641471	DNPH1	O43598	174 aa		13.8	□□□□□ -0.2
PPT1-215	ENST00000641471	ANGPTL7	O43827	346 aa		13.8	□□□□□ -0.2
PPT1-215	ENST00000641471	SRD5A2	P31213	254 aa		13.8	□□□□□ -0.2
PPT1-215	ENST00000641471	RPS18	P62269	152 aa	Known RBP	13.8	□□□□□ -0.2
PPT1-215	ENST00000641471	RAB32	Q13637	225 aa		13.8	□□□□□ -0.2
PPT1-215	ENST00000641471	ARL6IP1	Q15041	203 aa		13.8	□□□□□ -0.2
PPT1-215	ENST00000641471	PPA1	Q15181	289 aa		13.8	□□□□□ -0.2
PPT1-215	ENST00000641471	SURF2	Q15527	256 aa	Predicted RBP	13.8	□□□□□ -0.2
PPT1-215	ENST00000641471	PEAR1	Q5VY43	1037 aa	Predicted RBP	13.8	□□□□□ -0.2
PPT1-215	ENST00000641471	SLC39A7	Q92504	469 aa		13.8	□□□□□ -0.2
PPT1-215	ENST00000641471	MARC2	Q969Z3	335 aa		13.8	□□□□□ -0.2
PPT1-215	ENST00000641471	REEP6	Q96HR9	211 aa		13.8	□□□□□ -0.2
PPT1-215	ENST00000641471	METTL8	Q9H825	291 aa	Known RBP	13.8	□□□□□ -0.2
PPT1-215	ENST00000641471	CRLF2	Q9HC73	371 aa		13.8	□□□□□ -0.2
PPT1-215	ENST00000641471	ZNF581	Q9P0T4	197 aa		13.8	□□□□□ -0.2
PPT1-215	ENST00000641471	ZNF716	A6NP11	495 aa		13.79	□□□□□ -0.2
PPT1-215	ENST00000641471	DNASE2	O00115	360 aa	Predicted RBP	13.79	□□□□□ -0.2
PPT1-215	ENST00000641471	RRP8	O43159	456 aa	Known RBP	13.79	□□□□□ -0.2
PPT1-215	ENST00000641471	SPRY1	O43609	319 aa	Predicted RBP	13.79	□□□□□ -0.2
PPT1-215	ENST00000641471	SERPINA5	P05154	406 aa		13.79	□□□□□ -0.2
PPT1-215	ENST00000641471	CST2	P09228	141 aa		13.79	□□□□□ -0.2
PPT1-215	ENST00000641471	TMEM225B	P0DP42	221 aa		13.79	□□□□□ -0.2
PPT1-215	ENST00000641471	MTCP1	P56278	107 aa		13.79	□□□□□ -0.2
PPT1-215	ENST00000641471		Q0VFX4	171 aa		13.79	□□□□□ -0.2
PPT1-215	ENST00000641471	GALNTL5	Q7Z4T8	443 aa		13.79	□□□□□ -0.2
PPT1-215	ENST00000641471	UBALD2	Q8IYN6	164 aa		13.79	□□□□□ -0.2
PPT1-215	ENST00000641471	AQP10	Q96PS8	301 aa		13.79	□□□□□ -0.2
PPT1-215	ENST00000641471	ALKBH3	Q96Q83	286 aa	Predicted RBP	13.79	□□□□□ -0.2
PPT1-215	ENST00000641471	TMEM100	Q9NV29	134 aa		13.79	□□□□□ -0.2
PPT1-215	ENST00000641471	TMEM38B	Q9NVV0	291 aa		13.79	□□□□□ -0.2
PPT1-215	ENST00000641471	PLEKHJ1	Q9NW61	149 aa		13.79	□□□□□ -0.2
PPT1-215	ENST00000641471	FREM1	Q5H8C1	2179 aa		13.79	□□□□□ -0.2
PPT1-215	ENST00000641471	KNG1	P01042	644 aa		13.79	□□□□□ -0.2
PPT1-215	ENST00000641471	HOXB5	P09067	269 aa		13.79	□□□□□ -0.2
PPT1-215	ENST00000641471	PATE4	P0C8F1	98 aa		13.79	□□□□□ -0.2
PPT1-215	ENST00000641471	ARHGDIB	P52566	201 aa		13.79	□□□□□ -0.2
PPT1-215	ENST00000641471	RTL6	Q6ICC9	239 aa		13.79	□□□□□ -0.2
PPT1-215	ENST00000641471	RPUSD3	Q6P087	351 aa	Known RBP	13.79	□□□□□ -0.2
PPT1-215	ENST00000641471	PPP1R32	Q7Z5V6	425 aa		13.79	□□□□□ -0.2
PPT1-215	ENST00000641471	CCDC36	Q8IYA8	594 aa		13.79	□□□□□ -0.2
PPT1-215	ENST00000641471	OR1F12	Q8NHA8	337 aa		13.79	□□□□□ -0.2
PPT1-215	ENST00000641471	ZNF2	Q9BSG1	426 aa	Predicted RBP	13.79	□□□□□ -0.2
PPT1-215	ENST00000641471	C12orf4	Q9NQ89	552 aa		13.79	□□□□□ -0.2
PPT1-215	ENST00000641471	SLC39A1	Q9NY26	324 aa		13.79	□□□□□ -0.2
PPT1-215	ENST00000641471	C14orf166	Q9Y224	244 aa	Known RBP	13.79	□□□□□ -0.2
PPT1-215	ENST00000641471	RAB19	A4D1S5	217 aa		13.78	□□□□□ -0.2
PPT1-215	ENST00000641471	RFPL3S	P0C7P2	107 aa		13.78	□□□□□ -0.2
PPT1-215	ENST00000641471	CD79A	P11912	226 aa		13.78	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms