RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 NEIL1Q96FI4 390 aaPredicted RBP22.25■■□□□ 1.15
VEGFA-231ENST00000640499 MYCBPQ99417 103 aaPredicted RBP22.25■■□□□ 1.15
VEGFA-231ENST00000640499 CNOT2Q9NZN8 540 aaKnown RBP22.25■■□□□ 1.15
VEGFA-231ENST00000640499 ERVK-18Q9QC07 812 aa22.25■■□□□ 1.15
VEGFA-231ENST00000640499 CDC42EP3Q9UKI2 254 aa22.25■■□□□ 1.15
VEGFA-231ENST00000640499 EXOSC1Q9Y3B2 195 aaKnown RBP22.25■■□□□ 1.15
VEGFA-231ENST00000640499 JMJD1CQ15652 2540 aa22.25■■□□□ 1.15
VEGFA-231ENST00000640499 DOCK11Q5JSL3 2073 aa22.24■■□□□ 1.15
VEGFA-231ENST00000640499 TRAV38-1A0A0B4J264 116 aa22.24■■□□□ 1.15
VEGFA-231ENST00000640499 AKR7A2O43488 359 aa22.24■■□□□ 1.15
VEGFA-231ENST00000640499 FOXH1O75593 365 aa22.24■■□□□ 1.15
VEGFA-231ENST00000640499 CPT2P23786 658 aa22.24■■□□□ 1.15
VEGFA-231ENST00000640499 C21orf33P30042 268 aaPredicted RBP22.24■■□□□ 1.15
VEGFA-231ENST00000640499 GBX2P52951 348 aaPredicted RBP22.24■■□□□ 1.15
VEGFA-231ENST00000640499 CHRFAM7AQ494W8 412 aa22.24■■□□□ 1.15
VEGFA-231ENST00000640499 C6orf141Q5SZD1 244 aa22.24■■□□□ 1.15
VEGFA-231ENST00000640499 DACT3Q96B18 629 aaPredicted RBP22.24■■□□□ 1.15
VEGFA-231ENST00000640499 FGGYQ96C11 551 aa22.24■■□□□ 1.15
VEGFA-231ENST00000640499 PDCD1LG2Q9BQ51 273 aa22.24■■□□□ 1.15
VEGFA-231ENST00000640499 TMPRSS13Q9BYE2 586 aa22.24■■□□□ 1.15
VEGFA-231ENST00000640499 CHST5Q9GZS9 411 aa22.24■■□□□ 1.15
VEGFA-231ENST00000640499 IGKV1-27A0A075B6S5 117 aa22.23■■□□□ 1.15
VEGFA-231ENST00000640499 IGKV1-9A0A0C4DH69 117 aa22.23■■□□□ 1.15
VEGFA-231ENST00000640499 A0A1B0GW55 424 aa22.23■■□□□ 1.15
VEGFA-231ENST00000640499 EFCAB10A6NFE3 127 aa22.23■■□□□ 1.15
VEGFA-231ENST00000640499 DUX4L2P0CJ85 424 aa22.23■■□□□ 1.15
VEGFA-231ENST00000640499 DUX4L3P0CJ86 424 aa22.23■■□□□ 1.15
VEGFA-231ENST00000640499 DUX4L4P0CJ87 422 aa22.23■■□□□ 1.15
VEGFA-231ENST00000640499 DUX4L5P0CJ88 424 aa22.23■■□□□ 1.15
VEGFA-231ENST00000640499 DUX4L6P0CJ89 424 aa22.23■■□□□ 1.15
VEGFA-231ENST00000640499 DUX4L7P0CJ90 424 aa22.23■■□□□ 1.15
VEGFA-231ENST00000640499 MRPL28Q13084 256 aaKnown RBP22.23■■□□□ 1.15
VEGFA-231ENST00000640499 HAGHLQ6PII5 290 aaPredicted RBP22.23■■□□□ 1.15
VEGFA-231ENST00000640499 DUX4L9Q6RFH8 374 aaPredicted RBP22.23■■□□□ 1.15
VEGFA-231ENST00000640499 IZUMO2Q6UXV1 221 aa22.23■■□□□ 1.15
VEGFA-231ENST00000640499 RGP1Q92546 391 aaPredicted RBP22.23■■□□□ 1.15
VEGFA-231ENST00000640499 C10orf35Q96D05 121 aa22.23■■□□□ 1.15
VEGFA-231ENST00000640499 BEX2Q9BXY8 128 aa22.23■■□□□ 1.15
VEGFA-231ENST00000640499 SHARPINQ9H0F6 387 aa22.23■■□□□ 1.15
VEGFA-231ENST00000640499 DUX4Q9UBX2 424 aa22.23■■□□□ 1.15
VEGFA-231ENST00000640499 HHLA2Q9UM44 414 aa22.23■■□□□ 1.15
VEGFA-231ENST00000640499 LRCH1Q9Y2L9 728 aa22.23■■□□□ 1.15
VEGFA-231ENST00000640499 PPIAL4CA0A0B4J2A2 164 aa22.22■■□□□ 1.15
VEGFA-231ENST00000640499 SYNGR1O43759 233 aa22.22■■□□□ 1.15
VEGFA-231ENST00000640499 TFF1P04155 84 aa22.22■■□□□ 1.15
VEGFA-231ENST00000640499 ZNF12P17014 697 aa22.22■■□□□ 1.15
VEGFA-231ENST00000640499 MYF6P23409 242 aa22.22■■□□□ 1.15
VEGFA-231ENST00000640499 GMFBP60983 142 aa22.22■■□□□ 1.15
VEGFA-231ENST00000640499 ESCO2Q56NI9 601 aa22.22■■□□□ 1.15
VEGFA-231ENST00000640499 FAHD2BQ6P2I3 314 aaPredicted RBP22.22■■□□□ 1.15
VEGFA-231ENST00000640499 AHSA2Q719I0 299 aa22.22■■□□□ 1.15
VEGFA-231ENST00000640499 CALHM1Q8IU99 346 aa22.22■■□□□ 1.15
VEGFA-231ENST00000640499 ZNF676Q8N7Q3 588 aa22.22■■□□□ 1.15
VEGFA-231ENST00000640499 TRMT10AQ8TBZ6 339 aaKnown RBP22.22■■□□□ 1.15
VEGFA-231ENST00000640499 NPRL2Q8WTW4 380 aa22.22■■□□□ 1.15
VEGFA-231ENST00000640499 GATAD2BQ8WXI9 593 aa22.22■■□□□ 1.15
VEGFA-231ENST00000640499 SGCDQ92629 289 aa22.22■■□□□ 1.15
VEGFA-231ENST00000640499 FAHD2AQ96GK7 314 aa22.22■■□□□ 1.15
VEGFA-231ENST00000640499 SSBP3Q9BWW4 388 aaPredicted RBP22.22■■□□□ 1.15
VEGFA-231ENST00000640499 ANKRD60Q9BZ19 345 aa22.22■■□□□ 1.15
VEGFA-231ENST00000640499 RASSF4Q9H2L5 321 aa22.22■■□□□ 1.15
VEGFA-231ENST00000640499 PLEKHA1Q9HB21 404 aa22.22■■□□□ 1.15
VEGFA-231ENST00000640499 BABAM2Q9NXR7 383 aa22.22■■□□□ 1.15
VEGFA-231ENST00000640499 PCDHGB5Q9Y5G0 923 aa22.22■■□□□ 1.15
VEGFA-231ENST00000640499 OGG1O15527 345 aa22.21■■□□□ 1.15
VEGFA-231ENST00000640499 MUC1P15941 1255 aaPredicted RBP22.21■■□□□ 1.15
VEGFA-231ENST00000640499 MYL12AP19105 171 aa22.21■■□□□ 1.15
VEGFA-231ENST00000640499 PITPNBP48739 271 aa22.21■■□□□ 1.15
VEGFA-231ENST00000640499 WDR25Q64LD2 544 aaPredicted RBP22.21■■□□□ 1.15
VEGFA-231ENST00000640499 TMPRSS11AQ6ZMR5 421 aa22.21■■□□□ 1.15
VEGFA-231ENST00000640499 ANGPTL5Q86XS5 388 aa22.21■■□□□ 1.15
VEGFA-231ENST00000640499 OR5T2Q8NGG2 359 aa22.21■■□□□ 1.15
VEGFA-231ENST00000640499 OR8B3Q8NGG8 313 aa22.21■■□□□ 1.15
VEGFA-231ENST00000640499 OR52N1Q8NH53 320 aa22.21■■□□□ 1.15
VEGFA-231ENST00000640499 ZNF488Q96MN9 340 aa22.21■■□□□ 1.15
VEGFA-231ENST00000640499 OR8B2Q96RD0 313 aa22.21■■□□□ 1.15
VEGFA-231ENST00000640499 SMURF1Q9HCE7 757 aa22.21■■□□□ 1.15
VEGFA-231ENST00000640499 PAK1IP1Q9NWT1 392 aaPredicted RBP22.21■■□□□ 1.15
VEGFA-231ENST00000640499 LPAR3Q9UBY5 353 aa22.21■■□□□ 1.15
VEGFA-231ENST00000640499 OPN4Q9UHM6 478 aa22.21■■□□□ 1.15
VEGFA-231ENST00000640499 TRBV2A0A0J9YWF9 115 aa22.2■■□□□ 1.14
VEGFA-231ENST00000640499 TMEM212A6NML5 194 aa22.2■■□□□ 1.14
VEGFA-231ENST00000640499 ADAM20O43506 726 aa22.2■■□□□ 1.14
VEGFA-231ENST00000640499 MPZP25189 248 aa22.2■■□□□ 1.14
VEGFA-231ENST00000640499 HAAOP46952 286 aa22.2■■□□□ 1.14
VEGFA-231ENST00000640499 CDK5R1Q15078 307 aa22.2■■□□□ 1.14
VEGFA-231ENST00000640499 STUMQ69YW2 141 aa22.2■■□□□ 1.14
VEGFA-231ENST00000640499 RPL22L1Q6P5R6 122 aaKnown RBP22.2■■□□□ 1.14
VEGFA-231ENST00000640499 RNF144BQ7Z419 303 aa22.2■■□□□ 1.14
VEGFA-231ENST00000640499 FGFRL1Q8N441 504 aa22.2■■□□□ 1.14
VEGFA-231ENST00000640499 OR5AK2Q8NH90 309 aa22.2■■□□□ 1.14
VEGFA-231ENST00000640499 CCL13Q99616 98 aa22.2■■□□□ 1.14
VEGFA-231ENST00000640499 VCX3BQ9H321 246 aa22.2■■□□□ 1.14
VEGFA-231ENST00000640499 TRIM36Q9NQ86 728 aa22.2■■□□□ 1.14
VEGFA-231ENST00000640499 SNTG1Q9NSN8 517 aa22.2■■□□□ 1.14
VEGFA-231ENST00000640499 KAAG1Q9UBP8 84 aa22.2■■□□□ 1.14
VEGFA-231ENST00000640499 A0A0G2JMP0 313 aa22.19■■□□□ 1.14
VEGFA-231ENST00000640499 A0A0X1KG70 313 aa22.19■■□□□ 1.14
VEGFA-231ENST00000640499 FAM230AA0A1W2PPH8 454 aa22.19■■□□□ 1.14
VEGFA-231ENST00000640499 J3QT63 122 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms