RNA–Protein interactions for RNA: ENST00000640388.1

ATM-230, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-230ENST00000640388 GIPP09681 153 aaPredicted RBP1.87□□□□□ -2.11
ATM-230ENST00000640388 SRMP19623 302 aa1.87□□□□□ -2.11
ATM-230ENST00000640388 TCN1P20061 433 aaPredicted RBP1.87□□□□□ -2.11
ATM-230ENST00000640388 GTF2E2P29084 291 aaKnown RBP1.87□□□□□ -2.11
ATM-230ENST00000640388 HMOX2P30519 316 aa1.87□□□□□ -2.11
ATM-230ENST00000640388 SLC1A1P43005 524 aa1.87□□□□□ -2.11
ATM-230ENST00000640388 TMED10P49755 219 aaKnown RBP1.87□□□□□ -2.11
ATM-230ENST00000640388 SH3BGRP55822 239 aaPredicted RBP1.87□□□□□ -2.11
ATM-230ENST00000640388 HERVK_113P61574 105 aa1.87□□□□□ -2.11
ATM-230ENST00000640388 ADARB1P78563 741 aaKnown RBP1.87□□□□□ -2.11
ATM-230ENST00000640388 TGFBR3Q03167 851 aa1.87□□□□□ -2.11
ATM-230ENST00000640388 RAD51Q06609 339 aa1.87□□□□□ -2.11
ATM-230ENST00000640388 ITIH4Q14624 930 aa1.87□□□□□ -2.11
ATM-230ENST00000640388 LY6G6FQ5SQ64 297 aa1.87□□□□□ -2.11
ATM-230ENST00000640388 TTC19Q6DKK2 380 aaPredicted RBP1.87□□□□□ -2.11
ATM-230ENST00000640388 TTC23LQ6PF05 361 aa1.87□□□□□ -2.11
ATM-230ENST00000640388 ZFP2Q6ZN57 461 aa1.87□□□□□ -2.11
ATM-230ENST00000640388 ACP7Q6ZNF0 438 aa1.87□□□□□ -2.11
ATM-230ENST00000640388 HDDC2Q7Z4H3 204 aa1.87□□□□□ -2.11
ATM-230ENST00000640388 LINC01551Q86U37 167 aa1.87□□□□□ -2.11
ATM-230ENST00000640388 MMAAQ8IVH4 418 aaKnown RBP1.87□□□□□ -2.11
ATM-230ENST00000640388 APRG1Q8IVJ8 170 aa1.87□□□□□ -2.11
ATM-230ENST00000640388 H1FOOQ8IZA3 346 aaPredicted RBP1.87□□□□□ -2.11
ATM-230ENST00000640388 C6orf223Q8N319 242 aa1.87□□□□□ -2.11
ATM-230ENST00000640388 OR51G1Q8NGK1 321 aa1.87□□□□□ -2.11
ATM-230ENST00000640388 OR9G4Q8NGQ1 327 aa1.87□□□□□ -2.11
ATM-230ENST00000640388 OR1S2Q8NGQ3 325 aa1.87□□□□□ -2.11
ATM-230ENST00000640388 KIFAP3Q92845 792 aa1.87□□□□□ -2.11
ATM-230ENST00000640388 CIDECQ96AQ7 238 aaPredicted RBP1.87□□□□□ -2.11
ATM-230ENST00000640388 CCDC126Q96EE4 140 aa1.87□□□□□ -2.11
ATM-230ENST00000640388 CMTM7Q96FZ5 175 aa1.87□□□□□ -2.11
ATM-230ENST00000640388 RNF185Q96GF1 192 aa1.87□□□□□ -2.11
ATM-230ENST00000640388 HSFY1Q96LI6 401 aa1.87□□□□□ -2.11
ATM-230ENST00000640388 JSRP1Q96MG2 331 aaPredicted RBP1.87□□□□□ -2.11
ATM-230ENST00000640388 TSG101Q99816 390 aa1.87□□□□□ -2.11
ATM-230ENST00000640388 NRIP2Q9BQI9 281 aa1.87□□□□□ -2.11
ATM-230ENST00000640388 TMEM59Q9BXS4 323 aa1.87□□□□□ -2.11
ATM-230ENST00000640388 SLC17A9Q9BYT1 436 aa1.87□□□□□ -2.11
ATM-230ENST00000640388 RGCCQ9H4X1 137 aa1.87□□□□□ -2.11
ATM-230ENST00000640388 PLGRKTQ9HBL7 147 aa1.87□□□□□ -2.11
ATM-230ENST00000640388 KCNIP1Q9NZI2 227 aa1.87□□□□□ -2.11
ATM-230ENST00000640388 CCDC88CQ9P219 2028 aa1.87□□□□□ -2.11
ATM-230ENST00000640388 UXTQ9UBK9 157 aaPredicted RBP1.87□□□□□ -2.11
ATM-230ENST00000640388 SCML1Q9UN30 329 aa1.87□□□□□ -2.11
ATM-230ENST00000640388 SAR1BQ9Y6B6 198 aa1.87□□□□□ -2.11
ATM-230ENST00000640388 LRP1BQ9NZR2 4599 aa1.86□□□□□ -2.11
ATM-230ENST00000640388 IGLV4-69A0A075B6H9 119 aa1.86□□□□□ -2.11
ATM-230ENST00000640388 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.86□□□□□ -2.11
ATM-230ENST00000640388 ZNF701M0R085 212 aaPredicted RBP1.86□□□□□ -2.11
ATM-230ENST00000640388 NDUFS8O00217 210 aa1.86□□□□□ -2.11
ATM-230ENST00000640388 PES1O00541 588 aaKnown RBP1.86□□□□□ -2.11
ATM-230ENST00000640388 GOSR2O14653 212 aa1.86□□□□□ -2.11
ATM-230ENST00000640388 CHMP2AO43633 222 aa1.86□□□□□ -2.11
ATM-230ENST00000640388 EIF3GO75821 320 aaKnown RBP eCLIP1.86□□□□□ -2.11
ATM-230ENST00000640388 TNFSF13O75888 250 aa1.86□□□□□ -2.11
ATM-230ENST00000640388 S100A9P06702 114 aaKnown RBP1.86□□□□□ -2.11
ATM-230ENST00000640388 SERPINE2P07093 398 aa1.86□□□□□ -2.11
ATM-230ENST00000640388 IVLP07476 585 aa1.86□□□□□ -2.11
ATM-230ENST00000640388 INAFM2P0DMQ5 153 aa1.86□□□□□ -2.11
ATM-230ENST00000640388 ATP6V1B2P21281 511 aa1.86□□□□□ -2.11
ATM-230ENST00000640388 CXCR2P25025 360 aa1.86□□□□□ -2.11
ATM-230ENST00000640388 CASQ1P31415 396 aa1.86□□□□□ -2.11
ATM-230ENST00000640388 RORAP35398 523 aa1.86□□□□□ -2.11
ATM-230ENST00000640388 SRP14P37108 136 aaKnown RBP1.86□□□□□ -2.11
ATM-230ENST00000640388 PSMD8P48556 350 aa1.86□□□□□ -2.11
ATM-230ENST00000640388 GSSP48637 474 aa1.86□□□□□ -2.11
ATM-230ENST00000640388 KLK7P49862 253 aa1.86□□□□□ -2.11
ATM-230ENST00000640388 ETV1P50549 477 aa1.86□□□□□ -2.11
ATM-230ENST00000640388 SELENOTP62341 195 aa1.86□□□□□ -2.11
ATM-230ENST00000640388 IFT88Q13099 833 aa1.86□□□□□ -2.11
ATM-230ENST00000640388 SELENBP1Q13228 472 aa1.86□□□□□ -2.11
ATM-230ENST00000640388 GGTLC2Q14390 218 aa1.86□□□□□ -2.11
ATM-230ENST00000640388 NCF4Q15080 339 aa1.86□□□□□ -2.11
ATM-230ENST00000640388 HIKESHIQ53FT3 197 aa1.86□□□□□ -2.11
ATM-230ENST00000640388 C1orf100Q5SVJ3 147 aa1.86□□□□□ -2.11
ATM-230ENST00000640388 TSPO2Q5TGU0 170 aa1.86□□□□□ -2.11
ATM-230ENST00000640388 H3F3CQ6NXT2 135 aa1.86□□□□□ -2.11
ATM-230ENST00000640388 C1orf94Q6P1W5 598 aa1.86□□□□□ -2.11
ATM-230ENST00000640388 SPESP1Q6UW49 350 aa1.86□□□□□ -2.11
ATM-230ENST00000640388 TMIGD1Q6UXZ0 262 aa1.86□□□□□ -2.11
ATM-230ENST00000640388 ZNF836Q6ZNA1 936 aa1.86□□□□□ -2.11
ATM-230ENST00000640388 C19orf35Q6ZS72 473 aa1.86□□□□□ -2.11
ATM-230ENST00000640388 RFLNAQ6ZTI6 216 aa1.86□□□□□ -2.11
ATM-230ENST00000640388 LINC00523Q86TU6 105 aa1.86□□□□□ -2.11
ATM-230ENST00000640388 LHFPL3Q86UP9 236 aa1.86□□□□□ -2.11
ATM-230ENST00000640388 SLC26A11Q86WA9 606 aa1.86□□□□□ -2.11
ATM-230ENST00000640388 RPP25LQ8N5L8 163 aaKnown RBP1.86□□□□□ -2.11
ATM-230ENST00000640388 ZNF557Q8N988 423 aaPredicted RBP1.86□□□□□ -2.11
ATM-230ENST00000640388 ACOT4Q8N9L9 421 aa1.86□□□□□ -2.11
ATM-230ENST00000640388 RHEBL1Q8TAI7 183 aa1.86□□□□□ -2.11
ATM-230ENST00000640388 LINC01560Q8TB33 94 aa1.86□□□□□ -2.11
ATM-230ENST00000640388 FAM131CQ96AQ9 280 aa1.86□□□□□ -2.11
ATM-230ENST00000640388 BMFQ96LC9 184 aa1.86□□□□□ -2.11
ATM-230ENST00000640388 OR2M2Q96R28 347 aa1.86□□□□□ -2.11
ATM-230ENST00000640388 SH3GL3Q99963 347 aa1.86□□□□□ -2.11
ATM-230ENST00000640388 TMEM246Q9BRR3 403 aa1.86□□□□□ -2.11
ATM-230ENST00000640388 PELOQ9BRX2 385 aaKnown RBP1.86□□□□□ -2.11
ATM-230ENST00000640388 ACTR6Q9GZN1 396 aa1.86□□□□□ -2.11
ATM-230ENST00000640388 FGF20Q9NP95 211 aaPredicted RBP1.86□□□□□ -2.11
ATM-230ENST00000640388 ADAP2Q9NPF8 381 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms