RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 ANXA7P20073 488 aaKnown RBP6.89□□□□□ -1.31
SCARB2-220ENST00000640076 GNLYP22749 145 aa6.89□□□□□ -1.31
SCARB2-220ENST00000640076 DNASE1P24855 282 aa6.89□□□□□ -1.31
SCARB2-220ENST00000640076 LIPAP38571 399 aa6.89□□□□□ -1.31
SCARB2-220ENST00000640076 UQCRFS1P47985 274 aa6.89□□□□□ -1.31
SCARB2-220ENST00000640076 ADORA2A-AS1P86434 159 aa6.89□□□□□ -1.31
SCARB2-220ENST00000640076 PSG4Q00888 419 aa6.89□□□□□ -1.31
SCARB2-220ENST00000640076 BDH1Q02338 343 aa6.89□□□□□ -1.31
SCARB2-220ENST00000640076 TSC22D1Q15714 1073 aa6.89□□□□□ -1.31
SCARB2-220ENST00000640076 GABRA6Q16445 453 aa6.89□□□□□ -1.31
SCARB2-220ENST00000640076 VWC2Q2TAL6 325 aa6.89□□□□□ -1.31
SCARB2-220ENST00000640076 SLC36A2Q495M3 483 aa6.89□□□□□ -1.31
SCARB2-220ENST00000640076 STAC2Q6ZMT1 411 aa6.89□□□□□ -1.31
SCARB2-220ENST00000640076 TMEM182Q6ZP80 229 aaPredicted RBP6.89□□□□□ -1.31
SCARB2-220ENST00000640076 GPR141Q7Z602 305 aa6.89□□□□□ -1.31
SCARB2-220ENST00000640076 YIPF7Q8N8F6 280 aa6.89□□□□□ -1.31
SCARB2-220ENST00000640076 ZNF680Q8NEM1 530 aa6.89□□□□□ -1.31
SCARB2-220ENST00000640076 SPSB1Q96BD6 273 aa6.89□□□□□ -1.31
SCARB2-220ENST00000640076 DIRC2Q96SL1 478 aa6.89□□□□□ -1.31
SCARB2-220ENST00000640076 OR2H1Q9GZK4 316 aa6.89□□□□□ -1.31
SCARB2-220ENST00000640076 NOX3Q9HBY0 568 aa6.89□□□□□ -1.31
SCARB2-220ENST00000640076 PLEK2Q9NYT0 353 aa6.89□□□□□ -1.31
SCARB2-220ENST00000640076 FBXL3Q9UKT7 428 aa6.89□□□□□ -1.31
SCARB2-220ENST00000640076 SLC5A6Q9Y289 635 aa6.89□□□□□ -1.31
SCARB2-220ENST00000640076 GRIP1Q9Y3R0 1128 aa6.89□□□□□ -1.31
SCARB2-220ENST00000640076 FLNCQ14315 2725 aa6.89□□□□□ -1.31
SCARB2-220ENST00000640076 DPPA5A6NC42 116 aa6.88□□□□□ -1.31
SCARB2-220ENST00000640076 HELTA6NFD8 242 aa6.88□□□□□ -1.31
SCARB2-220ENST00000640076 NPIPB11E5RHQ5 1161 aa6.88□□□□□ -1.31
SCARB2-220ENST00000640076 K7EQM0 130 aa6.88□□□□□ -1.31
SCARB2-220ENST00000640076 WIPF1O43516 503 aa6.88□□□□□ -1.31
SCARB2-220ENST00000640076 SYNGR3O43761 229 aa6.88□□□□□ -1.31
SCARB2-220ENST00000640076 C1QL1O75973 258 aa6.88□□□□□ -1.31
SCARB2-220ENST00000640076 RPP14O95059 124 aaKnown RBP6.88□□□□□ -1.31
SCARB2-220ENST00000640076 HPXP02790 462 aa6.88□□□□□ -1.31
SCARB2-220ENST00000640076 H2BFMP0C1H6 154 aa6.88□□□□□ -1.31
SCARB2-220ENST00000640076 PSMB1P20618 241 aaKnown RBP6.88□□□□□ -1.31
SCARB2-220ENST00000640076 RGS6P49758 472 aa6.88□□□□□ -1.31
SCARB2-220ENST00000640076 RIDAP52758 137 aaKnown RBP6.88□□□□□ -1.31
SCARB2-220ENST00000640076 S100A12P80511 92 aa6.88□□□□□ -1.31
SCARB2-220ENST00000640076 TPBGQ13641 420 aa6.88□□□□□ -1.31
SCARB2-220ENST00000640076 RAB35Q15286 201 aa6.88□□□□□ -1.31
SCARB2-220ENST00000640076 SSX1Q16384 188 aa6.88□□□□□ -1.31
SCARB2-220ENST00000640076 PABPC1L2AQ5JQF8 200 aa6.88□□□□□ -1.31
SCARB2-220ENST00000640076 ELFN2Q5R3F8 820 aa6.88□□□□□ -1.31
SCARB2-220ENST00000640076 ZNF774Q6NX45 483 aa6.88□□□□□ -1.31
SCARB2-220ENST00000640076 DPPA2Q7Z7J5 298 aa6.88□□□□□ -1.31
SCARB2-220ENST00000640076 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.88□□□□□ -1.31
SCARB2-220ENST00000640076 ZFP41Q8N8Y5 198 aa6.88□□□□□ -1.31
SCARB2-220ENST00000640076 HSD17B8Q92506 261 aa6.88□□□□□ -1.31
SCARB2-220ENST00000640076 ZNF479Q96JC4 524 aa6.88□□□□□ -1.31
SCARB2-220ENST00000640076 CEP19Q96LK0 163 aa6.88□□□□□ -1.31
SCARB2-220ENST00000640076 ATF6BQ99941 703 aa6.88□□□□□ -1.31
SCARB2-220ENST00000640076 HDHD2Q9H0R4 259 aa6.88□□□□□ -1.31
SCARB2-220ENST00000640076 SAP30LQ9HAJ7 183 aa6.88□□□□□ -1.31
SCARB2-220ENST00000640076 GPN1Q9HCN4 374 aaPredicted RBP6.88□□□□□ -1.31
SCARB2-220ENST00000640076 B3GNT2Q9NY97 397 aa6.88□□□□□ -1.31
SCARB2-220ENST00000640076 ST6GALNAC2Q9UJ37 374 aa6.88□□□□□ -1.31
SCARB2-220ENST00000640076 MRPS7Q9Y2R9 242 aaKnown RBP6.88□□□□□ -1.31
SCARB2-220ENST00000640076 SIRT4Q9Y6E7 314 aaPredicted RBP6.88□□□□□ -1.31
SCARB2-220ENST00000640076 ANKHD1Q8IWZ3 2542 aaKnown RBP6.88□□□□□ -1.31
SCARB2-220ENST00000640076 A0A1B0GUH1 482 aa6.88□□□□□ -1.31
SCARB2-220ENST00000640076 PNMA8CA0A1B0GUJ8 204 aa6.88□□□□□ -1.31
SCARB2-220ENST00000640076 OR6C6A6NF89 314 aa6.88□□□□□ -1.31
SCARB2-220ENST00000640076 CCRL2O00421 344 aa6.88□□□□□ -1.31
SCARB2-220ENST00000640076 HS3ST1O14792 307 aa6.88□□□□□ -1.31
SCARB2-220ENST00000640076 KCNAB3O43448 404 aa6.88□□□□□ -1.31
SCARB2-220ENST00000640076 NDUFS6O75380 124 aaKnown RBP6.88□□□□□ -1.31
SCARB2-220ENST00000640076 UBL3O95164 117 aa6.88□□□□□ -1.31
SCARB2-220ENST00000640076 STAG3L2P0CL84 134 aa6.88□□□□□ -1.31
SCARB2-220ENST00000640076 CD79AP11912 226 aa6.88□□□□□ -1.31
SCARB2-220ENST00000640076 ZNF182P17025 639 aaPredicted RBP6.88□□□□□ -1.31
SCARB2-220ENST00000640076 CELP19835 753 aa6.88□□□□□ -1.31
SCARB2-220ENST00000640076 CHRNB4P30926 498 aa6.88□□□□□ -1.31
SCARB2-220ENST00000640076 OTX1P32242 354 aaPredicted RBP6.88□□□□□ -1.31
SCARB2-220ENST00000640076 DCTDP32321 178 aa6.88□□□□□ -1.31
SCARB2-220ENST00000640076 ARR3P36575 388 aa6.88□□□□□ -1.31
SCARB2-220ENST00000640076 TGFBR2P37173 567 aa6.88□□□□□ -1.31
SCARB2-220ENST00000640076 TGM4P49221 684 aa6.88□□□□□ -1.31
SCARB2-220ENST00000640076 TAS2R43P59537 309 aa6.88□□□□□ -1.31
SCARB2-220ENST00000640076 NANOS3P60323 173 aaKnown RBP6.88□□□□□ -1.31
SCARB2-220ENST00000640076 GRB2P62993 217 aaKnown RBP6.88□□□□□ -1.31
SCARB2-220ENST00000640076 CDK5R1Q15078 307 aa6.88□□□□□ -1.31
SCARB2-220ENST00000640076 TAF13Q15543 124 aa6.88□□□□□ -1.31
SCARB2-220ENST00000640076 RSPO1Q2MKA7 263 aaPredicted RBP6.88□□□□□ -1.31
SCARB2-220ENST00000640076 CCDC58Q4VC31 144 aa6.88□□□□□ -1.31
SCARB2-220ENST00000640076 PLAC9Q5JTB6 97 aa6.88□□□□□ -1.31
SCARB2-220ENST00000640076 LIPKQ5VXJ0 399 aa6.88□□□□□ -1.31
SCARB2-220ENST00000640076 DMKNQ6E0U4 476 aaPredicted RBP6.88□□□□□ -1.31
SCARB2-220ENST00000640076 BHLHA15Q7RTS1 189 aaPredicted RBP6.88□□□□□ -1.31
SCARB2-220ENST00000640076 CCDC36Q8IYA8 594 aa6.88□□□□□ -1.31
SCARB2-220ENST00000640076 C17orf78Q8N4C9 275 aa6.88□□□□□ -1.31
SCARB2-220ENST00000640076 WDR31Q8NA23 367 aa6.88□□□□□ -1.31
SCARB2-220ENST00000640076 OR1F12Q8NHA8 337 aa6.88□□□□□ -1.31
SCARB2-220ENST00000640076 RPS4Y2Q8TD47 263 aa6.88□□□□□ -1.31
SCARB2-220ENST00000640076 HAVCR2Q8TDQ0 301 aa6.88□□□□□ -1.31
SCARB2-220ENST00000640076 UFD1Q92890 307 aa6.88□□□□□ -1.31
SCARB2-220ENST00000640076 YIPF6Q96EC8 236 aa6.88□□□□□ -1.31
SCARB2-220ENST00000640076 CCDC120Q96HB5 630 aa6.88□□□□□ -1.31
SCARB2-220ENST00000640076 DPCDQ9BVM2 203 aaPredicted RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms