RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 ARF1P84077 181 aaKnown RBP18.69■□□□□ 0.58
CLN6-224ENST00000638076 NRN1LQ496H8 165 aa18.69■□□□□ 0.58
CLN6-224ENST00000638076 C6orf201Q7Z4U5 140 aa18.69■□□□□ 0.58
CLN6-224ENST00000638076 CSNK2A3Q8NEV1 391 aa18.69■□□□□ 0.58
CLN6-224ENST00000638076 BORCS8Q96FH0 119 aa18.69■□□□□ 0.58
CLN6-224ENST00000638076 CPNE2Q96FN4 548 aaPredicted RBP18.69■□□□□ 0.58
CLN6-224ENST00000638076 SEC22AQ96IW7 307 aa18.69■□□□□ 0.58
CLN6-224ENST00000638076 Q96M66 194 aa18.69■□□□□ 0.58
CLN6-224ENST00000638076 RGCCQ9H4X1 137 aa18.69■□□□□ 0.58
CLN6-224ENST00000638076 MED13Q9UHV7 2174 aa18.69■□□□□ 0.58
CLN6-224ENST00000638076 hCG_38984A0A1B0GV85 526 aa18.69■□□□□ 0.58
CLN6-224ENST00000638076 OR5H14A6NHG9 310 aa18.69■□□□□ 0.58
CLN6-224ENST00000638076 RP2O75695 350 aa18.69■□□□□ 0.58
CLN6-224ENST00000638076 HTR3BO95264 441 aa18.69■□□□□ 0.58
CLN6-224ENST00000638076 RBP2P50120 134 aa18.69■□□□□ 0.58
CLN6-224ENST00000638076 RAB14P61106 215 aa18.69■□□□□ 0.58
CLN6-224ENST00000638076 SRSF4Q08170 494 aaKnown RBP18.69■□□□□ 0.58
CLN6-224ENST00000638076 RSU1Q15404 277 aa18.69■□□□□ 0.58
CLN6-224ENST00000638076 TRIP6Q15654 476 aaKnown RBP18.69■□□□□ 0.58
CLN6-224ENST00000638076 ATP1A1-AS1Q5TC04 95 aa18.69■□□□□ 0.58
CLN6-224ENST00000638076 TMEM42Q69YG0 159 aa18.69■□□□□ 0.58
CLN6-224ENST00000638076 PRRG4Q9BZD6 226 aa18.69■□□□□ 0.58
CLN6-224ENST00000638076 PLEKHJ1Q9NW61 149 aa18.69■□□□□ 0.58
CLN6-224ENST00000638076 A0A096LPE4 126 aa18.68■□□□□ 0.58
CLN6-224ENST00000638076 A0A1W2PPZ6 126 aa18.68■□□□□ 0.58
CLN6-224ENST00000638076 CSTBP04080 98 aaKnown RBP18.68■□□□□ 0.58
CLN6-224ENST00000638076 EDN3P14138 238 aa18.68■□□□□ 0.58
CLN6-224ENST00000638076 OR3A2P47893 321 aa18.68■□□□□ 0.58
CLN6-224ENST00000638076 ARL6IP1Q15041 203 aa18.68■□□□□ 0.58
CLN6-224ENST00000638076 GSX2Q9BZM3 304 aa18.68■□□□□ 0.58
CLN6-224ENST00000638076 MFFQ9GZY8 342 aa18.68■□□□□ 0.58
CLN6-224ENST00000638076 GPR132Q9UNW8 380 aa18.68■□□□□ 0.58
CLN6-224ENST00000638076 KLF13Q9Y2Y9 288 aaPredicted RBP18.68■□□□□ 0.58
CLN6-224ENST00000638076 AUP1Q9Y679 476 aa18.68■□□□□ 0.58
CLN6-224ENST00000638076 SDCBPO00560 298 aaPredicted RBP18.68■□□□□ 0.58
CLN6-224ENST00000638076 NME2P1O60361 137 aa18.68■□□□□ 0.58
CLN6-224ENST00000638076 RPA2P15927 270 aa18.68■□□□□ 0.58
CLN6-224ENST00000638076 HLA-GP17693 338 aa18.68■□□□□ 0.58
CLN6-224ENST00000638076 NME2P22392 152 aa18.68■□□□□ 0.58
CLN6-224ENST00000638076 TAS2R31P59538 309 aa18.68■□□□□ 0.58
CLN6-224ENST00000638076 NKAPLQ5M9Q1 402 aa18.68■□□□□ 0.58
CLN6-224ENST00000638076 LHFPL2Q6ZUX7 228 aa18.68■□□□□ 0.58
CLN6-224ENST00000638076 KCTD9Q7L273 389 aa18.68■□□□□ 0.58
CLN6-224ENST00000638076 ZNF100Q8IYN0 542 aa18.68■□□□□ 0.58
CLN6-224ENST00000638076 MDS2Q8NDY4 140 aa18.68■□□□□ 0.58
CLN6-224ENST00000638076 C5orf66Q9H5L9 145 aa18.68■□□□□ 0.58
CLN6-224ENST00000638076 FAM25EA8MYX2 175 aa18.67■□□□□ 0.58
CLN6-224ENST00000638076 DUS4LO95620 317 aaKnown RBP18.67■□□□□ 0.58
CLN6-224ENST00000638076 FOXG1P55316 489 aaPredicted RBP18.67■□□□□ 0.58
CLN6-224ENST00000638076 TAS2R46P59540 309 aa18.67■□□□□ 0.58
CLN6-224ENST00000638076 PPIAP62937 165 aaKnown RBP18.67■□□□□ 0.58
CLN6-224ENST00000638076 FGL1Q08830 312 aa18.67■□□□□ 0.58
CLN6-224ENST00000638076 C3AR1Q16581 482 aa18.67■□□□□ 0.58
CLN6-224ENST00000638076 NHLRC3Q5JS37 347 aa18.67■□□□□ 0.58
CLN6-224ENST00000638076 ZNF701Q9NV72 531 aaPredicted RBP18.67■□□□□ 0.58
CLN6-224ENST00000638076 CEACAM18A8MTB9 384 aa18.67■□□□□ 0.58
CLN6-224ENST00000638076 ZNF587BE7ETH6 402 aa18.67■□□□□ 0.58
CLN6-224ENST00000638076 KLRC4-KLRK1H3BQV0 150 aa18.67■□□□□ 0.58
CLN6-224ENST00000638076 SERPINA5P05154 406 aa18.67■□□□□ 0.58
CLN6-224ENST00000638076 AP2S1P53680 142 aaPredicted RBP18.67■□□□□ 0.58
CLN6-224ENST00000638076 LRRC37A5PQ49AS3 106 aa18.67■□□□□ 0.58
CLN6-224ENST00000638076 ZNF546Q86UE3 836 aa18.67■□□□□ 0.58
CLN6-224ENST00000638076 OR13G1Q8NGZ3 307 aa18.67■□□□□ 0.58
CLN6-224ENST00000638076 C1QTNF5Q9BXJ0 243 aa18.67■□□□□ 0.58
CLN6-224ENST00000638076 EHFQ9NZC4 300 aa18.67■□□□□ 0.58
CLN6-224ENST00000638076 RPL36A-HNRNPH2H7BZ11 118 aa18.66■□□□□ 0.58
CLN6-224ENST00000638076 XRCC2O43543 280 aa18.66■□□□□ 0.58
CLN6-224ENST00000638076 OR8B8Q15620 311 aa18.66■□□□□ 0.58
CLN6-224ENST00000638076 TMEM128Q5BJH2 165 aa18.66■□□□□ 0.58
CLN6-224ENST00000638076 GSG1LQ6UXU4 331 aa18.66■□□□□ 0.58
CLN6-224ENST00000638076 TMEM17Q86X19 198 aa18.66■□□□□ 0.58
CLN6-224ENST00000638076 NAXEQ8NCW5 288 aa18.66■□□□□ 0.58
CLN6-224ENST00000638076 PRDM14Q9GZV8 571 aa18.66■□□□□ 0.58
CLN6-224ENST00000638076 COMMD9Q9P000 198 aa18.66■□□□□ 0.58
CLN6-224ENST00000638076 KMT2EQ8IZD2 1858 aa18.66■□□□□ 0.58
CLN6-224ENST00000638076 BAMBIQ13145 260 aa18.66■□□□□ 0.58
CLN6-224ENST00000638076 TGIF1Q15583 401 aa18.66■□□□□ 0.58
CLN6-224ENST00000638076 TAF9Q16594 264 aa18.66■□□□□ 0.58
CLN6-224ENST00000638076 RTL6Q6ICC9 239 aa18.66■□□□□ 0.58
CLN6-224ENST00000638076 LHFPL1Q86WI0 220 aa18.66■□□□□ 0.58
CLN6-224ENST00000638076 OR5AP2Q8NGF4 316 aa18.66■□□□□ 0.58
CLN6-224ENST00000638076 PIGCQ92535 297 aa18.66■□□□□ 0.58
CLN6-224ENST00000638076 BCO1Q9HAY6 547 aa18.66■□□□□ 0.58
CLN6-224ENST00000638076 FIGNL2A6NMB9 653 aa18.65■□□□□ 0.58
CLN6-224ENST00000638076 CA11O75493 328 aa18.65■□□□□ 0.58
CLN6-224ENST00000638076 PI3P19957 117 aa18.65■□□□□ 0.58
CLN6-224ENST00000638076 FPR2P25090 351 aa18.65■□□□□ 0.58
CLN6-224ENST00000638076 AGTR1P30556 359 aa18.65■□□□□ 0.58
CLN6-224ENST00000638076 PPA1Q15181 289 aa18.65■□□□□ 0.58
CLN6-224ENST00000638076 CHRFAM7AQ494W8 412 aa18.65■□□□□ 0.58
CLN6-224ENST00000638076 AADACL3Q5VUY0 350 aa18.65■□□□□ 0.58
CLN6-224ENST00000638076 SIGIRRQ6IA17 410 aa18.65■□□□□ 0.58
CLN6-224ENST00000638076 MOB3CQ70IA8 216 aa18.65■□□□□ 0.58
CLN6-224ENST00000638076 TMEM185AQ8NFB2 350 aa18.65■□□□□ 0.58
CLN6-224ENST00000638076 PPP1R1CQ8WVI7 109 aa18.65■□□□□ 0.58
CLN6-224ENST00000638076 TMEM230Q96A57 120 aa18.65■□□□□ 0.58
CLN6-224ENST00000638076 PCNX2A6NKB5 2137 aa18.65■□□□□ 0.58
CLN6-224ENST00000638076 ARGFXA6NJG6 315 aa18.65■□□□□ 0.58
CLN6-224ENST00000638076 ZNF724A8MTY0 619 aa18.65■□□□□ 0.58
CLN6-224ENST00000638076 HLA-HP01893 362 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms