RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 ASCL1P50553 236 aa17.51■□□□□ 0.39
CACNA1A-257ENST00000638009 MCHR2Q969V1 340 aa17.51■□□□□ 0.39
CACNA1A-257ENST00000638009 ZC3HAV1LQ96H79 300 aaKnown RBP17.51■□□□□ 0.39
CACNA1A-257ENST00000638009 C12orf49Q9H741 205 aa17.51■□□□□ 0.39
CACNA1A-257ENST00000638009 CHST2Q9Y4C5 530 aa17.51■□□□□ 0.39
CACNA1A-257ENST00000638009 J3KTA2 159 aa17.5■□□□□ 0.39
CACNA1A-257ENST00000638009 HOXC5Q00444 222 aa17.5■□□□□ 0.39
CACNA1A-257ENST00000638009 SHBQ15464 509 aa17.5■□□□□ 0.39
CACNA1A-257ENST00000638009 ANKRD55Q3KP44 614 aa17.5■□□□□ 0.39
CACNA1A-257ENST00000638009 TMPRSS13Q9BYE2 586 aa17.5■□□□□ 0.39
CACNA1A-257ENST00000638009 GPR84Q9NQS5 396 aa17.5■□□□□ 0.39
CACNA1A-257ENST00000638009 NUDT10Q8NFP7 164 aa17.5■□□□□ 0.39
CACNA1A-257ENST00000638009 MISP3Q96FF7 219 aa17.5■□□□□ 0.39
CACNA1A-257ENST00000638009 NUDT11Q96G61 164 aa17.5■□□□□ 0.39
CACNA1A-257ENST00000638009 LOC107984156A0A0G2JMH3 177 aa17.5■□□□□ 0.39
CACNA1A-257ENST00000638009 MBTPS2O43462 519 aa17.5■□□□□ 0.39
CACNA1A-257ENST00000638009 ARL17AQ8IVW1 177 aa17.5■□□□□ 0.39
CACNA1A-257ENST00000638009 SYS1Q8N2H4 156 aa17.5■□□□□ 0.39
CACNA1A-257ENST00000638009 IL22RA2Q969J5 263 aa17.5■□□□□ 0.39
CACNA1A-257ENST00000638009 OR2A5Q96R48 311 aa17.5■□□□□ 0.39
CACNA1A-257ENST00000638009 OR4C46A6NHA9 309 aa17.5■□□□□ 0.39
CACNA1A-257ENST00000638009 GALP22466 123 aa17.5■□□□□ 0.39
CACNA1A-257ENST00000638009 CXCL12P48061 93 aa17.5■□□□□ 0.39
CACNA1A-257ENST00000638009 CGGBP1Q9UFW8 167 aaPredicted RBP17.5■□□□□ 0.39
CACNA1A-257ENST00000638009 H7C1C5 153 aa17.5■□□□□ 0.39
CACNA1A-257ENST00000638009 CRHP06850 196 aa17.5■□□□□ 0.39
CACNA1A-257ENST00000638009 PKIBQ9C010 78 aa17.5■□□□□ 0.39
CACNA1A-257ENST00000638009 GPANK1O95872 356 aa17.5■□□□□ 0.39
CACNA1A-257ENST00000638009 CYBAP13498 195 aa17.5■□□□□ 0.39
CACNA1A-257ENST00000638009 VSTM2AQ8TAG5 236 aa17.5■□□□□ 0.39
CACNA1A-257ENST00000638009 ZNF764Q96H86 408 aaPredicted RBP17.5■□□□□ 0.39
CACNA1A-257ENST00000638009 RCL1Q9Y2P8 373 aaKnown RBP17.5■□□□□ 0.39
CACNA1A-257ENST00000638009 M0R296 226 aa17.5■□□□□ 0.39
CACNA1A-257ENST00000638009 EPXP11678 715 aa17.5■□□□□ 0.39
CACNA1A-257ENST00000638009 SMN1Q16637 294 aaKnown RBP17.5■□□□□ 0.39
CACNA1A-257ENST00000638009 IGSF11Q5DX21 431 aa17.5■□□□□ 0.39
CACNA1A-257ENST00000638009 PRSS42Q7Z5A4 293 aa17.5■□□□□ 0.39
CACNA1A-257ENST00000638009 ZC3H3Q8IXZ2 948 aaKnown RBP17.5■□□□□ 0.39
CACNA1A-257ENST00000638009 NPWQ8N729 165 aa17.5■□□□□ 0.39
CACNA1A-257ENST00000638009 SLAMF6Q96DU3 332 aa17.5■□□□□ 0.39
CACNA1A-257ENST00000638009 WDR89Q96FK6 387 aaPredicted RBP17.5■□□□□ 0.39
CACNA1A-257ENST00000638009 DUSP5Q16690 384 aa17.49■□□□□ 0.39
CACNA1A-257ENST00000638009 ZNF519Q8TB69 540 aa17.49■□□□□ 0.39
CACNA1A-257ENST00000638009 FAM117AQ9C073 453 aa17.49■□□□□ 0.39
CACNA1A-257ENST00000638009 S1PR5Q9H228 398 aa17.49■□□□□ 0.39
CACNA1A-257ENST00000638009 FPR2P25090 351 aa17.49■□□□□ 0.39
CACNA1A-257ENST00000638009 FAM3BP58499 235 aaPredicted RBP17.49■□□□□ 0.39
CACNA1A-257ENST00000638009 EVX2Q03828 476 aa17.49■□□□□ 0.39
CACNA1A-257ENST00000638009 SMIM4Q8WVI0 70 aa17.49■□□□□ 0.39
CACNA1A-257ENST00000638009 ADTRPQ96IZ2 230 aa17.49■□□□□ 0.39
CACNA1A-257ENST00000638009 SRD5A3Q9H8P0 318 aa17.49■□□□□ 0.39
CACNA1A-257ENST00000638009 TRAPPC4Q9Y296 219 aa17.49■□□□□ 0.39
CACNA1A-257ENST00000638009 HLA-GP17693 338 aa17.49■□□□□ 0.39
CACNA1A-257ENST00000638009 ANKLE1Q8NAG6 615 aa17.49■□□□□ 0.39
CACNA1A-257ENST00000638009 CDX2Q99626 313 aaPredicted RBP17.49■□□□□ 0.39
CACNA1A-257ENST00000638009 A0A087WV62 115 aa17.49■□□□□ 0.39
CACNA1A-257ENST00000638009 BEND2Q8NDZ0 799 aa17.49■□□□□ 0.39
CACNA1A-257ENST00000638009 OR52B4Q8NGK2 314 aa17.49■□□□□ 0.39
CACNA1A-257ENST00000638009 FBXO4Q9UKT5 387 aa17.49■□□□□ 0.39
CACNA1A-257ENST00000638009 EML6Q6ZMW3 1958 aa17.49■□□□□ 0.39
CACNA1A-257ENST00000638009 OR2W5A6NFC9 320 aa17.49■□□□□ 0.39
CACNA1A-257ENST00000638009 CAMPP49913 170 aa17.49■□□□□ 0.39
CACNA1A-257ENST00000638009 SCAND1P57086 179 aa17.49■□□□□ 0.39
CACNA1A-257ENST00000638009 FAM26EQ8N5C1 309 aa17.49■□□□□ 0.39
CACNA1A-257ENST00000638009 PRELID3AQ96N28 172 aa17.49■□□□□ 0.39
CACNA1A-257ENST00000638009 TREX1Q9NSU2 369 aa17.49■□□□□ 0.39
CACNA1A-257ENST00000638009 PTPRDP23468 1912 aa17.49■□□□□ 0.39
CACNA1A-257ENST00000638009 POM121BA6NF01 834 aa17.49■□□□□ 0.39
CACNA1A-257ENST00000638009 MOB3BQ86TA1 216 aa17.49■□□□□ 0.39
CACNA1A-257ENST00000638009 OR10G8Q8NGN5 311 aa17.49■□□□□ 0.39
CACNA1A-257ENST00000638009 LPAR3Q9UBY5 353 aa17.49■□□□□ 0.39
CACNA1A-257ENST00000638009 TOE1Q96GM8 510 aaKnown RBP17.48■□□□□ 0.39
CACNA1A-257ENST00000638009 IL17CQ9P0M4 197 aa17.48■□□□□ 0.39
CACNA1A-257ENST00000638009 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.48■□□□□ 0.39
CACNA1A-257ENST00000638009 CDKN3Q16667 212 aa17.48■□□□□ 0.39
CACNA1A-257ENST00000638009 DPPA3Q6W0C5 159 aa17.48■□□□□ 0.39
CACNA1A-257ENST00000638009 TMEM64Q6YI46 380 aa17.48■□□□□ 0.39
CACNA1A-257ENST00000638009 BVESQ8NE79 360 aa17.48■□□□□ 0.39
CACNA1A-257ENST00000638009 NPIPB6E9PJ23 425 aa17.48■□□□□ 0.39
CACNA1A-257ENST00000638009 HINT1P49773 126 aaPredicted RBP17.48■□□□□ 0.39
CACNA1A-257ENST00000638009 FAM72CH0Y354 149 aa17.48■□□□□ 0.39
CACNA1A-257ENST00000638009 DEFB133Q30KQ1 61 aa17.48■□□□□ 0.39
CACNA1A-257ENST00000638009 FAM72AQ5TYM5 149 aa17.48■□□□□ 0.39
CACNA1A-257ENST00000638009 FAM72DQ6L9T8 149 aa17.48■□□□□ 0.39
CACNA1A-257ENST00000638009 FAM72BQ86X60 149 aa17.48■□□□□ 0.39
CACNA1A-257ENST00000638009 CES1P1Q9UKY3 287 aa17.48■□□□□ 0.39
CACNA1A-257ENST00000638009 PROCRQ9UNN8 238 aa17.48■□□□□ 0.39
CACNA1A-257ENST00000638009 PNLIPRP2P54317 469 aa17.48■□□□□ 0.39
CACNA1A-257ENST00000638009 SMPD2O60906 423 aa17.48■□□□□ 0.39
CACNA1A-257ENST00000638009 HAAOP46952 286 aa17.48■□□□□ 0.39
CACNA1A-257ENST00000638009 BTG2P78543 158 aa17.48■□□□□ 0.39
CACNA1A-257ENST00000638009 NHLRC1Q6VVB1 395 aa17.48■□□□□ 0.39
CACNA1A-257ENST00000638009 NAV3Q8IVL0 2385 aa17.48■□□□□ 0.39
CACNA1A-257ENST00000638009 COL8A1P27658 744 aa17.48■□□□□ 0.39
CACNA1A-257ENST00000638009 TMEM255BQ8WV15 326 aa17.48■□□□□ 0.39
CACNA1A-257ENST00000638009 HDGFL3Q9Y3E1 203 aa17.48■□□□□ 0.39
CACNA1A-257ENST00000638009 LBX1P52954 281 aa17.47■□□□□ 0.39
CACNA1A-257ENST00000638009 IL13RA2Q14627 380 aa17.47■□□□□ 0.39
CACNA1A-257ENST00000638009 TMEM207Q6UWW9 146 aa17.47■□□□□ 0.39
CACNA1A-257ENST00000638009 APOBEC3DQ96AK3 386 aaPredicted RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms