RNA–Protein interactions for RNA: ENST00000637809.1

CACNA1A-250, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 871 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-250ENST00000637809 GNG3P63215 75 aa9.82□□□□□ -0.84
CACNA1A-250ENST00000637809 HABP2Q14520 560 aaPredicted RBP9.82□□□□□ -0.84
CACNA1A-250ENST00000637809 CEACAM21Q3KPI0 293 aa9.82□□□□□ -0.84
CACNA1A-250ENST00000637809 SPATS1Q496A3 300 aa9.82□□□□□ -0.84
CACNA1A-250ENST00000637809 DMRTC1Q5HYR2 192 aa9.82□□□□□ -0.84
CACNA1A-250ENST00000637809 CEP78Q5JTW2 689 aa9.82□□□□□ -0.84
CACNA1A-250ENST00000637809 CCBE1Q6UXH8 406 aaPredicted RBP9.82□□□□□ -0.84
CACNA1A-250ENST00000637809 THAP5Q7Z6K1 395 aa9.82□□□□□ -0.84
CACNA1A-250ENST00000637809 CPLX4Q7Z7G2 160 aa9.82□□□□□ -0.84
CACNA1A-250ENST00000637809 CD177Q8N6Q3 437 aa9.82□□□□□ -0.84
CACNA1A-250ENST00000637809 ZNF454Q8N9F8 522 aa9.82□□□□□ -0.84
CACNA1A-250ENST00000637809 PAPD5Q8NDF8 572 aaKnown RBP9.82□□□□□ -0.84
CACNA1A-250ENST00000637809 MRAPQ8TCY5 172 aa9.82□□□□□ -0.84
CACNA1A-250ENST00000637809 THEM6Q8WUY1 208 aa9.82□□□□□ -0.84
CACNA1A-250ENST00000637809 AQP3Q92482 292 aa9.82□□□□□ -0.84
CACNA1A-250ENST00000637809 MMP28Q9H239 520 aa9.82□□□□□ -0.84
CACNA1A-250ENST00000637809 OR51V1Q9H2C8 321 aa9.82□□□□□ -0.84
CACNA1A-250ENST00000637809 ARL8BQ9NVJ2 186 aa9.82□□□□□ -0.84
CACNA1A-250ENST00000637809 NECAP2Q9NVZ3 263 aa9.82□□□□□ -0.84
CACNA1A-250ENST00000637809 ACTR3BQ9P1U1 418 aa9.82□□□□□ -0.84
CACNA1A-250ENST00000637809 SAMHD1Q9Y3Z3 626 aaKnown RBP9.82□□□□□ -0.84
CACNA1A-250ENST00000637809 LRP12Q9Y561 859 aa9.82□□□□□ -0.84
CACNA1A-250ENST00000637809 COL7A1Q02388 2944 aa9.82□□□□□ -0.84
CACNA1A-250ENST00000637809 RFPL4AA6NLU0 287 aa9.81□□□□□ -0.84
CACNA1A-250ENST00000637809 RFPL4AL1F8VTS6 287 aa9.81□□□□□ -0.84
CACNA1A-250ENST00000637809 FBXO24O75426 580 aa9.81□□□□□ -0.84
CACNA1A-250ENST00000637809 LOXL3P58215 753 aa9.81□□□□□ -0.84
CACNA1A-250ENST00000637809 RPL31P62899 125 aaKnown RBP9.81□□□□□ -0.84
CACNA1A-250ENST00000637809 NSUN5P1Q3KNT7 163 aa9.81□□□□□ -0.84
CACNA1A-250ENST00000637809 PLBD1Q6P4A8 553 aa9.81□□□□□ -0.84
CACNA1A-250ENST00000637809 TRPM8Q7Z2W7 1104 aa9.81□□□□□ -0.84
CACNA1A-250ENST00000637809 LHFPL4Q7Z7J7 247 aa9.81□□□□□ -0.84
CACNA1A-250ENST00000637809 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.81□□□□□ -0.84
CACNA1A-250ENST00000637809 DEFB107AQ8IZN7 70 aa9.81□□□□□ -0.84
CACNA1A-250ENST00000637809 DYNAPQ8N1N2 210 aa9.81□□□□□ -0.84
CACNA1A-250ENST00000637809 OR10G2Q8NGC3 310 aa9.81□□□□□ -0.84
CACNA1A-250ENST00000637809 ZNF671Q8TAW3 534 aa9.81□□□□□ -0.84
CACNA1A-250ENST00000637809 OTULINQ96BN8 352 aa9.81□□□□□ -0.84
CACNA1A-250ENST00000637809 HIST1H2AAQ96QV6 131 aa9.81□□□□□ -0.84
CACNA1A-250ENST00000637809 MAGIXQ9H6Y5 334 aa9.81□□□□□ -0.84
CACNA1A-250ENST00000637809 HEXA-AS1Q9H8Q6 139 aa9.81□□□□□ -0.84
CACNA1A-250ENST00000637809 AURKAIP1Q9NWT8 199 aaPredicted RBP9.81□□□□□ -0.84
CACNA1A-250ENST00000637809 FAM206AQ9NX38 181 aa9.81□□□□□ -0.84
CACNA1A-250ENST00000637809 TAS2R1Q9NYW7 299 aa9.81□□□□□ -0.84
CACNA1A-250ENST00000637809 A0A0U1RQV5 110 aa9.8□□□□□ -0.84
CACNA1A-250ENST00000637809 A6NDX4 124 aa9.8□□□□□ -0.84
CACNA1A-250ENST00000637809 OR5B21A6NL26 309 aa9.8□□□□□ -0.84
CACNA1A-250ENST00000637809 XPNPEP2O43895 674 aa9.8□□□□□ -0.84
CACNA1A-250ENST00000637809 IGLV3-1P01715 115 aa9.8□□□□□ -0.84
CACNA1A-250ENST00000637809 CCL3L1P16619 93 aa9.8□□□□□ -0.84
CACNA1A-250ENST00000637809 ALOX5APP20292 161 aa9.8□□□□□ -0.84
CACNA1A-250ENST00000637809 COX7A1P24310 79 aa9.8□□□□□ -0.84
CACNA1A-250ENST00000637809 CAPZA1P52907 286 aa9.8□□□□□ -0.84
CACNA1A-250ENST00000637809 ZNF273Q14593 569 aa9.8□□□□□ -0.84
CACNA1A-250ENST00000637809 LDLRAD2Q5SZI1 272 aa9.8□□□□□ -0.84
CACNA1A-250ENST00000637809 OR2T5Q6IEZ7 315 aa9.8□□□□□ -0.84
CACNA1A-250ENST00000637809 HAGHLQ6PII5 290 aaPredicted RBP9.8□□□□□ -0.84
CACNA1A-250ENST00000637809 ACP7Q6ZNF0 438 aa9.8□□□□□ -0.84
CACNA1A-250ENST00000637809 NDUFA11Q86Y39 141 aa9.8□□□□□ -0.84
CACNA1A-250ENST00000637809 DTX3Q8N9I9 347 aa9.8□□□□□ -0.84
CACNA1A-250ENST00000637809 POC1AQ8NBT0 407 aa9.8□□□□□ -0.84
CACNA1A-250ENST00000637809 OR4S1Q8NGB4 309 aa9.8□□□□□ -0.84
CACNA1A-250ENST00000637809 OR5A2Q8NGI9 324 aa9.8□□□□□ -0.84
CACNA1A-250ENST00000637809 OR2T29Q8NH02 315 aa9.8□□□□□ -0.84
CACNA1A-250ENST00000637809 FAM81AQ8TBF8 368 aa9.8□□□□□ -0.84
CACNA1A-250ENST00000637809 TEX47Q8TBZ9 253 aa9.8□□□□□ -0.84
CACNA1A-250ENST00000637809 PHF21AQ96BD5 680 aa9.8□□□□□ -0.84
CACNA1A-250ENST00000637809 ZNF488Q96MN9 340 aa9.8□□□□□ -0.84
CACNA1A-250ENST00000637809 FEVQ99581 238 aa9.8□□□□□ -0.84
CACNA1A-250ENST00000637809 NKX3-1Q99801 234 aaPredicted RBP9.8□□□□□ -0.84
CACNA1A-250ENST00000637809 CITED2Q99967 270 aaPredicted RBP9.8□□□□□ -0.84
CACNA1A-250ENST00000637809 WNT10AQ9GZT5 417 aa9.8□□□□□ -0.84
CACNA1A-250ENST00000637809 NIPAL2Q9H841 368 aa9.8□□□□□ -0.84
CACNA1A-250ENST00000637809 REEP1Q9H902 201 aa9.8□□□□□ -0.84
CACNA1A-250ENST00000637809 RASL12Q9NYN1 266 aa9.8□□□□□ -0.84
CACNA1A-250ENST00000637809 TAGLN3Q9UI15 199 aa9.8□□□□□ -0.84
CACNA1A-250ENST00000637809 TCF19Q9Y242 345 aa9.8□□□□□ -0.84
CACNA1A-250ENST00000637809 PLXNB1O43157 2135 aa9.8□□□□□ -0.84
CACNA1A-250ENST00000637809 PGA5P0DJD9 388 aa9.79□□□□□ -0.84
CACNA1A-250ENST00000637809 PAICSP22234 425 aaKnown RBP9.79□□□□□ -0.84
CACNA1A-250ENST00000637809 PRDX2P32119 198 aa9.79□□□□□ -0.84
CACNA1A-250ENST00000637809 MAP2K3P46734 347 aa9.79□□□□□ -0.84
CACNA1A-250ENST00000637809 CEBPDP49716 269 aaPredicted RBP9.79□□□□□ -0.84
CACNA1A-250ENST00000637809 RAB13P51153 203 aa9.79□□□□□ -0.84
CACNA1A-250ENST00000637809 HCCSP53701 268 aa9.79□□□□□ -0.84
CACNA1A-250ENST00000637809 DLX6P56179 175 aa9.79□□□□□ -0.84
CACNA1A-250ENST00000637809 EMX1Q04741 257 aaPredicted RBP9.79□□□□□ -0.84
CACNA1A-250ENST00000637809 LCN8Q6JVE9 175 aa9.79□□□□□ -0.84
CACNA1A-250ENST00000637809 C16orf89Q6UX73 402 aa9.79□□□□□ -0.84
CACNA1A-250ENST00000637809 ZNF561Q8N587 486 aa9.79□□□□□ -0.84
CACNA1A-250ENST00000637809 BBS1Q8NFJ9 593 aa9.79□□□□□ -0.84
CACNA1A-250ENST00000637809 OR4M1Q8NGD0 313 aa9.79□□□□□ -0.84
CACNA1A-250ENST00000637809 R3HDM4Q96D70 268 aa9.79□□□□□ -0.84
CACNA1A-250ENST00000637809 NRIP2Q9BQI9 281 aa9.79□□□□□ -0.84
CACNA1A-250ENST00000637809 CDCA4Q9BXL8 241 aa9.79□□□□□ -0.84
CACNA1A-250ENST00000637809 FAM107BQ9H098 131 aa9.79□□□□□ -0.84
CACNA1A-250ENST00000637809 MED4Q9NPJ6 270 aa9.79□□□□□ -0.84
CACNA1A-250ENST00000637809 USE1Q9NZ43 259 aa9.79□□□□□ -0.84
CACNA1A-250ENST00000637809 TENM3Q9P273 2699 aa9.78□□□□□ -0.84
CACNA1A-250ENST00000637809 A0A1W2PPH5 198 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms