RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 ANKRD19PQ9H560 264 aa14.38□□□□□ -0.11
CLN6-212ENST00000636020 ZFP57Q9NU63 452 aa14.38□□□□□ -0.11
CLN6-212ENST00000636020 SCOCQ9UIL1 159 aa14.38□□□□□ -0.11
CLN6-212ENST00000636020 MINOS1-NBL1R4GNA1 71 aa14.38□□□□□ -0.11
CLN6-212ENST00000636020 PSMB11A5LHX3 300 aa14.37□□□□□ -0.11
CLN6-212ENST00000636020 NUDT19A8MXV4 375 aa14.37□□□□□ -0.11
CLN6-212ENST00000636020 ARPC3O15145 178 aa14.37□□□□□ -0.11
CLN6-212ENST00000636020 TAF13Q15543 124 aa14.37□□□□□ -0.11
CLN6-212ENST00000636020 C9orf66Q5T8R8 295 aa14.37□□□□□ -0.11
CLN6-212ENST00000636020 LCN8Q6JVE9 175 aa14.37□□□□□ -0.11
CLN6-212ENST00000636020 SMARCD3Q6STE5 483 aa14.37□□□□□ -0.11
CLN6-212ENST00000636020 KCTD8Q6ZWB6 473 aa14.37□□□□□ -0.11
CLN6-212ENST00000636020 DCXRQ7Z4W1 244 aa14.37□□□□□ -0.11
CLN6-212ENST00000636020 ZNF329Q86UD4 541 aa14.37□□□□□ -0.11
CLN6-212ENST00000636020 CAPSLQ8WWF8 208 aa14.37□□□□□ -0.11
CLN6-212ENST00000636020 RNF170Q96K19 258 aa14.37□□□□□ -0.11
CLN6-212ENST00000636020 C7orf26Q96N11 449 aa14.37□□□□□ -0.11
CLN6-212ENST00000636020 DUX3Q96PT4 197 aa14.37□□□□□ -0.11
CLN6-212ENST00000636020 SH3GL1Q99961 368 aa14.37□□□□□ -0.11
CLN6-212ENST00000636020 CENPMQ9NSP4 180 aa14.37□□□□□ -0.11
CLN6-212ENST00000636020 UNC119BA6NIH7 251 aa14.36□□□□□ -0.11
CLN6-212ENST00000636020 RFPL4AA6NLU0 287 aa14.36□□□□□ -0.11
CLN6-212ENST00000636020 ZNF850A8MQ14 1090 aa14.36□□□□□ -0.11
CLN6-212ENST00000636020 RFPL4AL1F8VTS6 287 aa14.36□□□□□ -0.11
CLN6-212ENST00000636020 MTRF1O75570 445 aaKnown RBP14.36□□□□□ -0.11
CLN6-212ENST00000636020 SNRNP70P08621 437 aaKnown RBP14.36□□□□□ -0.11
CLN6-212ENST00000636020 IGHV1-8P0DP01 117 aa14.36□□□□□ -0.11
CLN6-212ENST00000636020 CFL1P23528 166 aaKnown RBP14.36□□□□□ -0.11
CLN6-212ENST00000636020 CD24P25063 80 aa14.36□□□□□ -0.11
CLN6-212ENST00000636020 PRDX4Q13162 271 aa14.36□□□□□ -0.11
CLN6-212ENST00000636020 CYLC2Q14093 348 aaPredicted RBP14.36□□□□□ -0.11
CLN6-212ENST00000636020 SEC23BQ15437 767 aa14.36□□□□□ -0.11
CLN6-212ENST00000636020 ZNF561Q8N587 486 aa14.36□□□□□ -0.11
CLN6-212ENST00000636020 KLHL30-AS1Q8NEE0 82 aa14.36□□□□□ -0.11
CLN6-212ENST00000636020 HPSE2Q8WWQ2 592 aa14.36□□□□□ -0.11
CLN6-212ENST00000636020 SLAMF6Q96DU3 332 aa14.36□□□□□ -0.11
CLN6-212ENST00000636020 SLC25A33Q9BSK2 321 aa14.36□□□□□ -0.11
CLN6-212ENST00000636020 TMEM120AQ9BXJ8 343 aa14.36□□□□□ -0.11
CLN6-212ENST00000636020 C1orf21Q9H246 121 aa14.36□□□□□ -0.11
CLN6-212ENST00000636020 ABCB9Q9NP78 766 aa14.36□□□□□ -0.11
CLN6-212ENST00000636020 ZNF256Q9Y2P7 627 aaPredicted RBP14.36□□□□□ -0.11
CLN6-212ENST00000636020 SORL1Q92673 2214 aa14.35□□□□□ -0.11
CLN6-212ENST00000636020 TVP23AA6NH52 213 aa14.35□□□□□ -0.11
CLN6-212ENST00000636020 ANXA2P07355 339 aaKnown RBP14.35□□□□□ -0.11
CLN6-212ENST00000636020 SNCBQ16143 134 aa14.35□□□□□ -0.11
CLN6-212ENST00000636020 PRSS45Q7RTY3 260 aa14.35□□□□□ -0.11
CLN6-212ENST00000636020 FTMTQ8N4E7 242 aa14.35□□□□□ -0.11
CLN6-212ENST00000636020 OR8J3Q8NGG0 315 aa14.35□□□□□ -0.11
CLN6-212ENST00000636020 BCAS4Q8TDM0 211 aa14.35□□□□□ -0.11
CLN6-212ENST00000636020 RAX2Q96IS3 184 aa14.35□□□□□ -0.11
CLN6-212ENST00000636020 ZNF319Q9P2F9 582 aa14.35□□□□□ -0.11
CLN6-212ENST00000636020 CCL24O00175 119 aa14.34□□□□□ -0.11
CLN6-212ENST00000636020 EDF1O60869 148 aaKnown RBP14.34□□□□□ -0.11
CLN6-212ENST00000636020 CST4P01036 141 aa14.34□□□□□ -0.11
CLN6-212ENST00000636020 RBP4P02753 201 aa14.34□□□□□ -0.11
CLN6-212ENST00000636020 PYCR1P32322 319 aa14.34□□□□□ -0.11
CLN6-212ENST00000636020 CX3CR1P49238 355 aa14.34□□□□□ -0.11
CLN6-212ENST00000636020 RAB25P57735 213 aa14.34□□□□□ -0.11
CLN6-212ENST00000636020 LYPD4Q6UWN0 246 aa14.34□□□□□ -0.11
CLN6-212ENST00000636020 NDNFQ8TB73 568 aa14.34□□□□□ -0.11
CLN6-212ENST00000636020 ZNRF4Q8WWF5 429 aa14.34□□□□□ -0.11
CLN6-212ENST00000636020 RBM14Q96PK6 669 aaKnown RBP14.34□□□□□ -0.11
CLN6-212ENST00000636020 OR51I2Q9H344 312 aa14.34□□□□□ -0.11
CLN6-212ENST00000636020 ZMAT4Q9H898 229 aa14.34□□□□□ -0.11
CLN6-212ENST00000636020 ZNF878C9JN71 531 aa14.33□□□□□ -0.12
CLN6-212ENST00000636020 FXYD1O00168 92 aa14.33□□□□□ -0.12
CLN6-212ENST00000636020 SLC1A7O00341 560 aa14.33□□□□□ -0.12
CLN6-212ENST00000636020 JTBO76095 146 aa14.33□□□□□ -0.12
CLN6-212ENST00000636020 OR2F2O95006 317 aa14.33□□□□□ -0.12
CLN6-212ENST00000636020 ZNF728P0DKX0 622 aa14.33□□□□□ -0.12
CLN6-212ENST00000636020 PIPP12273 146 aaPredicted RBP14.33□□□□□ -0.12
CLN6-212ENST00000636020 ACKR3P25106 362 aa14.33□□□□□ -0.12
CLN6-212ENST00000636020 PRDX2P32119 198 aa14.33□□□□□ -0.12
CLN6-212ENST00000636020 GPM6AP51674 278 aa14.33□□□□□ -0.12
CLN6-212ENST00000636020 C9orf152Q5JTZ5 239 aa14.33□□□□□ -0.12
CLN6-212ENST00000636020 CGB2Q6NT52 195 aa14.33□□□□□ -0.12
CLN6-212ENST00000636020 ACP7Q6ZNF0 438 aa14.33□□□□□ -0.12
CLN6-212ENST00000636020 FAM57BQ71RH2 274 aa14.33□□□□□ -0.12
CLN6-212ENST00000636020 OVCH2Q7RTZ1 564 aa14.33□□□□□ -0.12
CLN6-212ENST00000636020 ZNF695Q8IW36 515 aa14.33□□□□□ -0.12
CLN6-212ENST00000636020 OR5M8Q8NGP6 311 aa14.33□□□□□ -0.12
CLN6-212ENST00000636020 ZNF671Q8TAW3 534 aa14.33□□□□□ -0.12
CLN6-212ENST00000636020 EDA2RQ9HAV5 297 aa14.33□□□□□ -0.12
CLN6-212ENST00000636020 TBC1D23Q9NUY8 699 aa14.33□□□□□ -0.12
CLN6-212ENST00000636020 FGFR1OP2Q9NVK5 253 aa14.33□□□□□ -0.12
CLN6-212ENST00000636020 RASL12Q9NYN1 266 aa14.33□□□□□ -0.12
CLN6-212ENST00000636020 A0A1W2PRQ8 180 aa14.32□□□□□ -0.12
CLN6-212ENST00000636020 SLC6A6P31641 620 aa14.32□□□□□ -0.12
CLN6-212ENST00000636020 OR3A4PP47883 348 aa14.32□□□□□ -0.12
CLN6-212ENST00000636020 GABPB1Q06547 395 aaPredicted RBP14.32□□□□□ -0.12
CLN6-212ENST00000636020 DGCR6Q14129 220 aa14.32□□□□□ -0.12
CLN6-212ENST00000636020 GFOD2Q3B7J2 385 aa14.32□□□□□ -0.12
CLN6-212ENST00000636020 PLBD1Q6P4A8 553 aa14.32□□□□□ -0.12
CLN6-212ENST00000636020 EGFL6Q8IUX8 553 aa14.32□□□□□ -0.12
CLN6-212ENST00000636020 PIGCQ92535 297 aa14.32□□□□□ -0.12
CLN6-212ENST00000636020 ISOC1Q96CN7 298 aa14.32□□□□□ -0.12
CLN6-212ENST00000636020 OR52D1Q9H346 318 aa14.32□□□□□ -0.12
CLN6-212ENST00000636020 LYVE1Q9Y5Y7 322 aa14.32□□□□□ -0.12
CLN6-212ENST00000636020 COMMD3-BMI1R4GMX3 469 aa14.32□□□□□ -0.12
CLN6-212ENST00000636020 FAM220BPB1ANY3 271 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms