RNA–Protein interactions for RNA: ENST00000635754.1

CLN6-211, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 1,441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-211ENST00000635754 Q71RC1 249 aaPredicted RBP12.98□□□□□ -0.33
CLN6-211ENST00000635754 UTS2BQ765I0 119 aa12.98□□□□□ -0.33
CLN6-211ENST00000635754 ZNF573Q86YE8 665 aa12.98□□□□□ -0.33
CLN6-211ENST00000635754 LINC01356Q8N9X3 169 aa12.98□□□□□ -0.33
CLN6-211ENST00000635754 OR10Z1Q8NGY1 313 aa12.98□□□□□ -0.33
CLN6-211ENST00000635754 TRMT10AQ8TBZ6 339 aaKnown RBP12.98□□□□□ -0.33
CLN6-211ENST00000635754 GPR148Q8TDV2 347 aa12.98□□□□□ -0.33
CLN6-211ENST00000635754 NPRL2Q8WTW4 380 aa12.98□□□□□ -0.33
CLN6-211ENST00000635754 SGCDQ92629 289 aa12.98□□□□□ -0.33
CLN6-211ENST00000635754 TMEM246Q9BRR3 403 aa12.98□□□□□ -0.33
CLN6-211ENST00000635754 CCDC90BQ9GZT6 254 aa12.98□□□□□ -0.33
CLN6-211ENST00000635754 METTL17Q9H7H0 456 aaPredicted RBP12.98□□□□□ -0.33
CLN6-211ENST00000635754 PATZ1Q9HBE1 687 aaKnown RBP12.98□□□□□ -0.33
CLN6-211ENST00000635754 SIRT4Q9Y6E7 314 aaPredicted RBP12.98□□□□□ -0.33
CLN6-211ENST00000635754 NSD1Q96L73 2696 aaPredicted RBP12.98□□□□□ -0.33
CLN6-211ENST00000635754 TRAV38-1A0A0B4J264 116 aa12.97□□□□□ -0.33
CLN6-211ENST00000635754 FAM230AA0A1W2PPH8 454 aa12.97□□□□□ -0.33
CLN6-211ENST00000635754 PQLC2LA1A4F0 135 aa12.97□□□□□ -0.33
CLN6-211ENST00000635754 OOEPA6NGQ2 149 aa12.97□□□□□ -0.33
CLN6-211ENST00000635754 CEACAM18A8MTB9 384 aa12.97□□□□□ -0.33
CLN6-211ENST00000635754 C3orf80F5H4A9 247 aa12.97□□□□□ -0.33
CLN6-211ENST00000635754 LGALS8O00214 317 aa12.97□□□□□ -0.33
CLN6-211ENST00000635754 LHBP01229 141 aa12.97□□□□□ -0.33
CLN6-211ENST00000635754 OCM2P0CE71 109 aa12.97□□□□□ -0.33
CLN6-211ENST00000635754 OCMP0CE72 109 aaPredicted RBP12.97□□□□□ -0.33
CLN6-211ENST00000635754 EEF1B2P24534 225 aaKnown RBP12.97□□□□□ -0.33
CLN6-211ENST00000635754 HAAOP46952 286 aa12.97□□□□□ -0.33
CLN6-211ENST00000635754 HOXA4Q00056 320 aaPredicted RBP12.97□□□□□ -0.33
CLN6-211ENST00000635754 DMKNQ6E0U4 476 aaPredicted RBP12.97□□□□□ -0.33
CLN6-211ENST00000635754 SFRP4Q6FHJ7 346 aaPredicted RBP12.97□□□□□ -0.33
CLN6-211ENST00000635754 FAM166AQ6J272 317 aa12.97□□□□□ -0.33
CLN6-211ENST00000635754 HAGHLQ6PII5 290 aaPredicted RBP12.97□□□□□ -0.33
CLN6-211ENST00000635754 ZFP41Q8N8Y5 198 aa12.97□□□□□ -0.33
CLN6-211ENST00000635754 C19orf18Q8NEA5 215 aa12.97□□□□□ -0.33
CLN6-211ENST00000635754 DEFB108BQ8NET1 73 aa12.97□□□□□ -0.33
CLN6-211ENST00000635754 AQP3Q92482 292 aa12.97□□□□□ -0.33
CLN6-211ENST00000635754 TMEM165Q9HC07 324 aa12.97□□□□□ -0.33
CLN6-211ENST00000635754 YAE1D1Q9NRH1 226 aa12.97□□□□□ -0.33
CLN6-211ENST00000635754 ZNF281Q9Y2X9 895 aa12.97□□□□□ -0.33
CLN6-211ENST00000635754 HIVEP2P31629 2446 aa12.97□□□□□ -0.33
CLN6-211ENST00000635754 PNMA8CA0A1B0GUJ8 204 aa12.96□□□□□ -0.33
CLN6-211ENST00000635754 SRRM5B3KS81 715 aa12.96□□□□□ -0.33
CLN6-211ENST00000635754 FAM157AC9JC47 383 aa12.96□□□□□ -0.33
CLN6-211ENST00000635754 J3QT63 122 aa12.96□□□□□ -0.33
CLN6-211ENST00000635754 TGFAP01135 160 aa12.96□□□□□ -0.33
CLN6-211ENST00000635754 MT-ND2P03891 347 aa12.96□□□□□ -0.33
CLN6-211ENST00000635754 CD2P06729 351 aa12.96□□□□□ -0.33
CLN6-211ENST00000635754 RPS2P15880 293 aaKnown RBP12.96□□□□□ -0.33
CLN6-211ENST00000635754 EGR1P18146 543 aa12.96□□□□□ -0.33
CLN6-211ENST00000635754 FUT6P51993 359 aa12.96□□□□□ -0.33
CLN6-211ENST00000635754 BDH1Q02338 343 aa12.96□□□□□ -0.33
CLN6-211ENST00000635754 IRF3Q14653 427 aa12.96□□□□□ -0.33
CLN6-211ENST00000635754 MED22Q15528 200 aa12.96□□□□□ -0.33
CLN6-211ENST00000635754 MICBQ29980 383 aa12.96□□□□□ -0.33
CLN6-211ENST00000635754 DCDC5Q6ZRR9 648 aa12.96□□□□□ -0.33
CLN6-211ENST00000635754 PRSS48Q7RTY5 328 aa12.96□□□□□ -0.33
CLN6-211ENST00000635754 SERPINA12Q8IW75 414 aa12.96□□□□□ -0.33
CLN6-211ENST00000635754 ZNF671Q8TAW3 534 aa12.96□□□□□ -0.33
CLN6-211ENST00000635754 RGP1Q92546 391 aaPredicted RBP12.96□□□□□ -0.33
CLN6-211ENST00000635754 GHSRQ92847 366 aa12.96□□□□□ -0.33
CLN6-211ENST00000635754 BORCS8Q96FH0 119 aa12.96□□□□□ -0.33
CLN6-211ENST00000635754 MIOXQ9UGB7 285 aa12.96□□□□□ -0.33
CLN6-211ENST00000635754 POLDIP2Q9Y2S7 368 aa12.96□□□□□ -0.33
CLN6-211ENST00000635754 MALRD1Q5VYJ5 2156 aa12.96□□□□□ -0.33
CLN6-211ENST00000635754 A8MV72 311 aaPredicted RBP12.96□□□□□ -0.34
CLN6-211ENST00000635754 AKR7A2O43488 359 aa12.96□□□□□ -0.34
CLN6-211ENST00000635754 RHBDL1O75783 438 aa12.96□□□□□ -0.34
CLN6-211ENST00000635754 MSMBP08118 114 aa12.96□□□□□ -0.34
CLN6-211ENST00000635754 MUC1P15941 1255 aaPredicted RBP12.96□□□□□ -0.34
CLN6-211ENST00000635754 ATF1P18846 271 aa12.96□□□□□ -0.34
CLN6-211ENST00000635754 CELP19835 753 aa12.96□□□□□ -0.34
CLN6-211ENST00000635754 PRKACBP22694 351 aa12.96□□□□□ -0.34
CLN6-211ENST00000635754 CPT2P23786 658 aa12.96□□□□□ -0.34
CLN6-211ENST00000635754 AZGP1P25311 298 aaKnown RBP12.96□□□□□ -0.34
CLN6-211ENST00000635754 SOX2P48431 317 aa12.96□□□□□ -0.34
CLN6-211ENST00000635754 ACSM1Q08AH1 577 aa12.96□□□□□ -0.34
CLN6-211ENST00000635754 SPHARQ15513 63 aa12.96□□□□□ -0.34
CLN6-211ENST00000635754 YIF1BQ5BJH7 314 aa12.96□□□□□ -0.34
CLN6-211ENST00000635754 TEX36Q5VZQ5 186 aa12.96□□□□□ -0.34
CLN6-211ENST00000635754 NLRC3Q7RTR2 1065 aa12.96□□□□□ -0.34
CLN6-211ENST00000635754 PARP16Q8N5Y8 322 aa12.96□□□□□ -0.34
CLN6-211ENST00000635754 DNAAF1Q8NEP3 725 aa12.96□□□□□ -0.34
CLN6-211ENST00000635754 OR5D14Q8NGL3 314 aa12.96□□□□□ -0.34
CLN6-211ENST00000635754 OR13C9Q8NGT0 318 aa12.96□□□□□ -0.34
CLN6-211ENST00000635754 OR51F2Q8NH61 342 aa12.96□□□□□ -0.34
CLN6-211ENST00000635754 TMEM106AQ96A25 262 aa12.96□□□□□ -0.34
CLN6-211ENST00000635754 SPSB1Q96BD6 273 aa12.96□□□□□ -0.34
CLN6-211ENST00000635754 LPAR2Q9HBW0 351 aa12.96□□□□□ -0.34
CLN6-211ENST00000635754 NEK6Q9HC98 313 aa12.96□□□□□ -0.34
CLN6-211ENST00000635754 KCNS2Q9ULS6 477 aa12.96□□□□□ -0.34
CLN6-211ENST00000635754 LRCH1Q9Y2L9 728 aa12.96□□□□□ -0.34
CLN6-211ENST00000635754 LSM2Q9Y333 95 aaKnown RBP12.96□□□□□ -0.34
CLN6-211ENST00000635754 IGHV3OR15-7A0A075B7D8 119 aa12.95□□□□□ -0.34
CLN6-211ENST00000635754 IGKV1-9A0A0C4DH69 117 aa12.95□□□□□ -0.34
CLN6-211ENST00000635754 F5H0A9 414 aaPredicted RBP12.95□□□□□ -0.34
CLN6-211ENST00000635754 NDUFA2O43678 99 aa12.95□□□□□ -0.34
CLN6-211ENST00000635754 PLPP2O43688 288 aa12.95□□□□□ -0.34
CLN6-211ENST00000635754 RBP2P50120 134 aa12.95□□□□□ -0.34
CLN6-211ENST00000635754 ATP1B3P54709 279 aa12.95□□□□□ -0.34
CLN6-211ENST00000635754 GABARAPL2P60520 117 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms