RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 HRH1P35367 487 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 LSAMPQ13449 338 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 FAHD1Q6P587 224 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 RTN4RL1Q86UN2 441 aaPredicted RBP5□□□□□ -1.61
SCN1A-209ENST00000635750 ZNF441Q8N8Z8 693 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 SLC25A40Q8TBP6 338 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 SPACA9Q96E40 222 aaPredicted RBP5□□□□□ -1.61
SCN1A-209ENST00000635750 MRGPRX1Q96LB2 322 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 DAPP1Q9UN19 280 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 A4GNTQ9UNA3 340 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 FCGR3BO75015 233 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 MT-CO3P00414 261 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 NGFP01138 241 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 ATF1P18846 271 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 PMCHP20382 165 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 HINT1P49773 126 aaPredicted RBP5□□□□□ -1.61
SCN1A-209ENST00000635750 SULT1A2P50226 295 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 PMP22Q01453 160 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 AGERQ15109 404 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 CCDC144NLQ6NUI1 221 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 WFDC3Q8IUB2 231 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 OR10A7Q8NGE5 316 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 PP6455Q8WZ26 134 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 CSNK1G1Q9HCP0 422 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 CA10Q9NS85 328 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 LPAR3Q9UBY5 353 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 KNDC1Q76NI1 1749 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 A0A087WV62 115 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 NPIPB6E9PJ23 425 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 TMPRSS11DO60235 418 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 ZNF354AO60765 605 aaPredicted RBP5□□□□□ -1.61
SCN1A-209ENST00000635750 PTGFRP43088 359 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 PPOXP50336 477 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 PCBP3P57721 371 aaKnown RBP5□□□□□ -1.61
SCN1A-209ENST00000635750 SLC35B4Q969S0 331 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 DERL3Q96Q80 235 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 MAP1LC3CQ9BXW4 147 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 SLC22A13Q9Y226 551 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 VSIG4Q9Y279 399 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 ZNF256Q9Y2P7 627 aaPredicted RBP5□□□□□ -1.61
SCN1A-209ENST00000635750 FAM221AA4D161 298 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 FITM1A5D6W6 292 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 HIST1H1CP16403 213 aaKnown RBP5□□□□□ -1.61
SCN1A-209ENST00000635750 NAAAQ02083 359 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 GUCA2BQ16661 112 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 CEACAM16Q2WEN9 425 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 LAMTOR1Q6IAA8 161 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 MYPOPQ86VE0 399 aaPredicted RBP5□□□□□ -1.61
SCN1A-209ENST00000635750 SLC16A11Q8NCK7 471 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 DUSP18Q8NEJ0 188 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 OR1N2Q8NGR9 330 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 MOGAT1Q96PD6 335 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 SEC11CQ9BY50 192 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 ZNF552Q9H707 407 aaPredicted RBP5□□□□□ -1.61
SCN1A-209ENST00000635750 TUBA4BQ9H853 241 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 SAP30LQ9HAJ7 183 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 C19orf53Q9UNZ5 99 aaPredicted RBP5□□□□□ -1.61
SCN1A-209ENST00000635750 TDRD15B5MCY1 1934 aaKnown RBP5□□□□□ -1.61
SCN1A-209ENST00000635750 PTPRZ1P23471 2315 aaPredicted RBP5□□□□□ -1.61
SCN1A-209ENST00000635750 IGKV6D-21A0A0A0MT36 114 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 MFSD2BA6NFX1 497 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 LMO7DNF2Z398 122 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 LALBAP00709 142 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 PF4P02776 101 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 GLI4P10075 376 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 MEOX2P50222 304 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 PDZK1IP1Q13113 114 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 RIGQ13278 110 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 ZNF528Q3MIS6 628 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 LIPNQ5VXI9 398 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 JMJD6Q6NYC1 403 aaPredicted RBP5□□□□□ -1.61
SCN1A-209ENST00000635750 RXFP4Q8TDU9 374 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 ASB13Q8WXK3 278 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 C10orf90Q96M02 699 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 SDF2Q99470 211 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 RHNO1Q9BSD3 238 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 CHRNA10Q9GZZ6 450 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 PARD6AQ9NPB6 346 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 MARCH5Q9NX47 278 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 INSIG2Q9Y5U4 225 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 DNAJC25-GNG10A0A024R161 153 aa4.99□□□□□ -1.61
SCN1A-209ENST00000635750 A0A1W2PPC4 97 aa4.99□□□□□ -1.61
SCN1A-209ENST00000635750 A0A1W2PPQ1 181 aa4.99□□□□□ -1.61
SCN1A-209ENST00000635750 CCSO14618 274 aa4.99□□□□□ -1.61
SCN1A-209ENST00000635750 RHBDL1O75783 438 aa4.99□□□□□ -1.61
SCN1A-209ENST00000635750 CD82P27701 267 aa4.99□□□□□ -1.61
SCN1A-209ENST00000635750 CLDN10P78369 228 aa4.99□□□□□ -1.61
SCN1A-209ENST00000635750 ROM1Q03395 351 aa4.99□□□□□ -1.61
SCN1A-209ENST00000635750 RPL18Q07020 188 aaKnown RBP4.99□□□□□ -1.61
SCN1A-209ENST00000635750 COX20Q5RI15 118 aa4.99□□□□□ -1.61
SCN1A-209ENST00000635750 ZNF547Q8IVP9 402 aa4.99□□□□□ -1.61
SCN1A-209ENST00000635750 NUDT8Q8WV74 236 aa4.99□□□□□ -1.61
SCN1A-209ENST00000635750 FAM210BQ96KR6 192 aa4.99□□□□□ -1.61
SCN1A-209ENST00000635750 C2orf50Q96LR7 162 aa4.99□□□□□ -1.61
SCN1A-209ENST00000635750 OR4C12Q96R67 309 aa4.99□□□□□ -1.61
SCN1A-209ENST00000635750 NAA60Q9H7X0 242 aa4.99□□□□□ -1.61
SCN1A-209ENST00000635750 PSORS1C1Q9UIG5 152 aa4.99□□□□□ -1.61
SCN1A-209ENST00000635750 TNFSF14O43557 240 aa4.99□□□□□ -1.61
SCN1A-209ENST00000635750 MPDU1O75352 247 aa4.99□□□□□ -1.61
SCN1A-209ENST00000635750 PIGAP37287 484 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms