RNA–Protein interactions for RNA: ENST00000629667.2

PDLIM3-213, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 1,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-213ENST00000629667 ERVFRD-1P60508 538 aa12.63□□□□□ -0.39
PDLIM3-213ENST00000629667 GNG3P63215 75 aa12.63□□□□□ -0.39
PDLIM3-213ENST00000629667 SAMD4BQ5PRF9 694 aaKnown RBP12.63□□□□□ -0.39
PDLIM3-213ENST00000629667 LINC01590Q5TEZ4 76 aa12.63□□□□□ -0.39
PDLIM3-213ENST00000629667 TMEM200BQ69YZ2 307 aa12.63□□□□□ -0.39
PDLIM3-213ENST00000629667 CCBE1Q6UXH8 406 aaPredicted RBP12.63□□□□□ -0.39
PDLIM3-213ENST00000629667 SHFQ7M4L6 423 aa12.63□□□□□ -0.39
PDLIM3-213ENST00000629667 TMEM219Q86XT9 240 aa12.63□□□□□ -0.39
PDLIM3-213ENST00000629667 LINC00471Q8N535 108 aa12.63□□□□□ -0.39
PDLIM3-213ENST00000629667 C11orf42Q8N5U0 333 aa12.63□□□□□ -0.39
PDLIM3-213ENST00000629667 OR2T33Q8NG76 320 aa12.63□□□□□ -0.39
PDLIM3-213ENST00000629667 OR4Q3Q8NH05 313 aa12.63□□□□□ -0.39
PDLIM3-213ENST00000629667 RPS4Y2Q8TD47 263 aa12.63□□□□□ -0.39
PDLIM3-213ENST00000629667 WIPF2Q8TF74 440 aaPredicted RBP12.63□□□□□ -0.39
PDLIM3-213ENST00000629667 AMELYQ99218 206 aa12.63□□□□□ -0.39
PDLIM3-213ENST00000629667 WNT10AQ9GZT5 417 aa12.63□□□□□ -0.39
PDLIM3-213ENST00000629667 USE1Q9NZ43 259 aa12.63□□□□□ -0.39
PDLIM3-213ENST00000629667 FAM90A8PA6NJQ4 464 aa12.62□□□□□ -0.39
PDLIM3-213ENST00000629667 RIIAD1A6NNX1 92 aa12.62□□□□□ -0.39
PDLIM3-213ENST00000629667 SLC1A7O00341 560 aa12.62□□□□□ -0.39
PDLIM3-213ENST00000629667 GASTP01350 101 aa12.62□□□□□ -0.39
PDLIM3-213ENST00000629667 CCL3L1P16619 93 aa12.62□□□□□ -0.39
PDLIM3-213ENST00000629667 ZNF3P17036 446 aa12.62□□□□□ -0.39
PDLIM3-213ENST00000629667 GSTT1P30711 240 aa12.62□□□□□ -0.39
PDLIM3-213ENST00000629667 ZNF782Q6ZMW2 699 aaPredicted RBP12.62□□□□□ -0.39
PDLIM3-213ENST00000629667 ZNF561Q8N587 486 aa12.62□□□□□ -0.39
PDLIM3-213ENST00000629667 OR4M1Q8NGD0 313 aa12.62□□□□□ -0.39
PDLIM3-213ENST00000629667 OR2T27Q8NH04 317 aa12.62□□□□□ -0.39
PDLIM3-213ENST00000629667 FAM81AQ8TBF8 368 aa12.62□□□□□ -0.39
PDLIM3-213ENST00000629667 OTULINQ96BN8 352 aa12.62□□□□□ -0.39
PDLIM3-213ENST00000629667 FOXRED1Q96CU9 486 aaPredicted RBP12.62□□□□□ -0.39
PDLIM3-213ENST00000629667 CMTM5Q96DZ9 223 aa12.62□□□□□ -0.39
PDLIM3-213ENST00000629667 LYZL4Q96KX0 146 aa12.62□□□□□ -0.39
PDLIM3-213ENST00000629667 NSMCE2Q96MF7 247 aa12.62□□□□□ -0.39
PDLIM3-213ENST00000629667 OR51I2Q9H344 312 aa12.62□□□□□ -0.39
PDLIM3-213ENST00000629667 LYVE1Q9Y5Y7 322 aa12.62□□□□□ -0.39
PDLIM3-213ENST00000629667 A6NDX4 124 aa12.61□□□□□ -0.39
PDLIM3-213ENST00000629667 RFPL4AA6NLU0 287 aa12.61□□□□□ -0.39
PDLIM3-213ENST00000629667 RFPL4AL1F8VTS6 287 aa12.61□□□□□ -0.39
PDLIM3-213ENST00000629667 TNFRSF11BO00300 401 aa12.61□□□□□ -0.39
PDLIM3-213ENST00000629667 MTRF1O75570 445 aaKnown RBP12.61□□□□□ -0.39
PDLIM3-213ENST00000629667 SOX14O95416 240 aa12.61□□□□□ -0.39
PDLIM3-213ENST00000629667 ALDOBP05062 364 aa12.61□□□□□ -0.39
PDLIM3-213ENST00000629667 ARG1P05089 322 aa12.61□□□□□ -0.39
PDLIM3-213ENST00000629667 VDAC2P45880 294 aaPredicted RBP12.61□□□□□ -0.39
PDLIM3-213ENST00000629667 HMGA2P52926 109 aa12.61□□□□□ -0.39
PDLIM3-213ENST00000629667 SSX2Q16385 188 aa12.61□□□□□ -0.39
PDLIM3-213ENST00000629667 CEACAM21Q3KPI0 293 aa12.61□□□□□ -0.39
PDLIM3-213ENST00000629667 CEP78Q5JTW2 689 aa12.61□□□□□ -0.39
PDLIM3-213ENST00000629667 DYNAPQ8N1N2 210 aa12.61□□□□□ -0.39
PDLIM3-213ENST00000629667 AQP11Q8NBQ7 271 aa12.61□□□□□ -0.39
PDLIM3-213ENST00000629667 THEM6Q8WUY1 208 aa12.61□□□□□ -0.39
PDLIM3-213ENST00000629667 MALSU1Q96EH3 234 aa12.61□□□□□ -0.39
PDLIM3-213ENST00000629667 C1orf21Q9H246 121 aa12.61□□□□□ -0.39
PDLIM3-213ENST00000629667 MED20Q9H944 212 aa12.61□□□□□ -0.39
PDLIM3-213ENST00000629667 ARMC1Q9NVT9 282 aa12.61□□□□□ -0.39
PDLIM3-213ENST00000629667 RASL12Q9NYN1 266 aa12.61□□□□□ -0.39
PDLIM3-213ENST00000629667 TBL2Q9Y4P3 447 aaKnown RBP12.61□□□□□ -0.39
PDLIM3-213ENST00000629667 FAM183AA6NL82 134 aa12.6□□□□□ -0.39
PDLIM3-213ENST00000629667 CCNB2O95067 398 aa12.6□□□□□ -0.39
PDLIM3-213ENST00000629667 PF4P02776 101 aa12.6□□□□□ -0.39
PDLIM3-213ENST00000629667 LYNP07948 512 aa12.6□□□□□ -0.39
PDLIM3-213ENST00000629667 MSX2P35548 267 aaPredicted RBP12.6□□□□□ -0.39
PDLIM3-213ENST00000629667 MAP2K3P46734 347 aa12.6□□□□□ -0.39
PDLIM3-213ENST00000629667 SLC35A2P78381 396 aa12.6□□□□□ -0.39
PDLIM3-213ENST00000629667 SMIM21Q3B7S5 101 aa12.6□□□□□ -0.39
PDLIM3-213ENST00000629667 ZNF770Q6IQ21 691 aaPredicted RBP12.6□□□□□ -0.39
PDLIM3-213ENST00000629667 HAGHLQ6PII5 290 aaPredicted RBP12.6□□□□□ -0.39
PDLIM3-213ENST00000629667 ACP7Q6ZNF0 438 aa12.6□□□□□ -0.39
PDLIM3-213ENST00000629667 Q6ZS46 218 aa12.6□□□□□ -0.39
PDLIM3-213ENST00000629667 CD177Q8N6Q3 437 aa12.6□□□□□ -0.39
PDLIM3-213ENST00000629667 OR5AU1Q8NGC0 362 aa12.6□□□□□ -0.39
PDLIM3-213ENST00000629667 OR8B12Q8NGG6 310 aa12.6□□□□□ -0.39
PDLIM3-213ENST00000629667 AQP3Q92482 292 aa12.6□□□□□ -0.39
PDLIM3-213ENST00000629667 DNAH9Q9NYC9 4486 aa12.59□□□□□ -0.39
PDLIM3-213ENST00000629667 OR5B21A6NL26 309 aa12.59□□□□□ -0.39
PDLIM3-213ENST00000629667 ARPC2O15144 300 aa12.59□□□□□ -0.39
PDLIM3-213ENST00000629667 HSD17B1P14061 328 aa12.59□□□□□ -0.39
PDLIM3-213ENST00000629667 PRDX2P32119 198 aa12.59□□□□□ -0.39
PDLIM3-213ENST00000629667 PSMA6P60900 246 aaKnown RBP12.59□□□□□ -0.39
PDLIM3-213ENST00000629667 BLCAPP62952 87 aa12.59□□□□□ -0.39
PDLIM3-213ENST00000629667 CD83Q01151 205 aa12.59□□□□□ -0.39
PDLIM3-213ENST00000629667 ZNF273Q14593 569 aa12.59□□□□□ -0.39
PDLIM3-213ENST00000629667 TMEM95Q3KNT9 176 aa12.59□□□□□ -0.39
PDLIM3-213ENST00000629667 DMRTC1Q5HYR2 192 aa12.59□□□□□ -0.39
PDLIM3-213ENST00000629667 CALHM1Q8IU99 346 aa12.59□□□□□ -0.39
PDLIM3-213ENST00000629667 OR5A2Q8NGI9 324 aa12.59□□□□□ -0.39
PDLIM3-213ENST00000629667 OR13D1Q8NGV5 346 aa12.59□□□□□ -0.39
PDLIM3-213ENST00000629667 WWC2-AS2Q96NR7 200 aa12.59□□□□□ -0.39
PDLIM3-213ENST00000629667 OR51V1Q9H2C8 321 aa12.59□□□□□ -0.39
PDLIM3-213ENST00000629667 MUC13Q9H3R2 512 aa12.59□□□□□ -0.39
PDLIM3-213ENST00000629667 CMC2Q9NRP2 79 aa12.59□□□□□ -0.39
PDLIM3-213ENST00000629667 ARGLU1Q9NWB6 273 aaPredicted RBP12.59□□□□□ -0.39
PDLIM3-213ENST00000629667 WI2-2373I1.2A0A1W2PRP0 233 aa12.58□□□□□ -0.4
PDLIM3-213ENST00000629667 F2RL2O00254 374 aa12.58□□□□□ -0.4
PDLIM3-213ENST00000629667 PIPP12273 146 aaPredicted RBP12.58□□□□□ -0.4
PDLIM3-213ENST00000629667 CEBPDP49716 269 aaPredicted RBP12.58□□□□□ -0.4
PDLIM3-213ENST00000629667 OR12D2P58182 307 aa12.58□□□□□ -0.4
PDLIM3-213ENST00000629667 CD69Q07108 199 aa12.58□□□□□ -0.4
PDLIM3-213ENST00000629667 PLCXD3Q63HM9 321 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 169.7 ms