RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 IGHV1-2P23083 117 aa10.85□□□□□ -0.67
SYNGAP1-207ENST00000628646 FOXG1P55316 489 aaPredicted RBP10.85□□□□□ -0.67
SYNGAP1-207ENST00000628646 OR51E1Q8TCB6 317 aa10.85□□□□□ -0.67
SYNGAP1-207ENST00000628646 BEX1Q9HBH7 125 aa10.85□□□□□ -0.67
SYNGAP1-207ENST00000628646 FBXL3Q9UKT7 428 aa10.85□□□□□ -0.67
SYNGAP1-207ENST00000628646 IGLV1-36A0A0B4J1U3 117 aa10.84□□□□□ -0.67
SYNGAP1-207ENST00000628646 IGKV1D-43A0A0B4J1Z2 117 aa10.84□□□□□ -0.67
SYNGAP1-207ENST00000628646 SRSF10O75494 262 aaKnown RBP10.84□□□□□ -0.67
SYNGAP1-207ENST00000628646 CHRM2P08172 466 aa10.84□□□□□ -0.67
SYNGAP1-207ENST00000628646 DBHP09172 617 aa10.84□□□□□ -0.67
SYNGAP1-207ENST00000628646 CD37P11049 281 aa10.84□□□□□ -0.67
SYNGAP1-207ENST00000628646 SCGB2B2Q4G0G5 96 aa10.84□□□□□ -0.67
SYNGAP1-207ENST00000628646 CD276Q5ZPR3 534 aa10.84□□□□□ -0.67
SYNGAP1-207ENST00000628646 PLCXD3Q63HM9 321 aa10.84□□□□□ -0.67
SYNGAP1-207ENST00000628646 RTL6Q6ICC9 239 aa10.84□□□□□ -0.67
SYNGAP1-207ENST00000628646 ADAM5Q6NVV9 412 aa10.84□□□□□ -0.67
SYNGAP1-207ENST00000628646 MOB3CQ70IA8 216 aa10.84□□□□□ -0.67
SYNGAP1-207ENST00000628646 USB1Q9BQ65 265 aaKnown RBP10.84□□□□□ -0.67
SYNGAP1-207ENST00000628646 OR2H1Q9GZK4 316 aa10.84□□□□□ -0.67
SYNGAP1-207ENST00000628646 FAM215AQ9Y5M1 114 aa10.84□□□□□ -0.67
SYNGAP1-207ENST00000628646 OR5H1A6NKK0 313 aa10.84□□□□□ -0.67
SYNGAP1-207ENST00000628646 ZNF736B4DX44 427 aaPredicted RBP10.84□□□□□ -0.67
SYNGAP1-207ENST00000628646 H3BUI4 141 aa10.84□□□□□ -0.67
SYNGAP1-207ENST00000628646 FABP7O15540 132 aa10.84□□□□□ -0.67
SYNGAP1-207ENST00000628646 SULT1A3P0DMM9 295 aa10.84□□□□□ -0.67
SYNGAP1-207ENST00000628646 SULT1A4P0DMN0 295 aa10.84□□□□□ -0.67
SYNGAP1-207ENST00000628646 KCNG3Q8TAE7 436 aa10.84□□□□□ -0.67
SYNGAP1-207ENST00000628646 ELOVL5Q9NYP7 299 aa10.84□□□□□ -0.67
SYNGAP1-207ENST00000628646 XRCC3O43542 346 aa10.84□□□□□ -0.67
SYNGAP1-207ENST00000628646 BPNT1O95861 308 aa10.84□□□□□ -0.67
SYNGAP1-207ENST00000628646 HPXP02790 462 aa10.84□□□□□ -0.67
SYNGAP1-207ENST00000628646 PTHLHP12272 177 aa10.84□□□□□ -0.67
SYNGAP1-207ENST00000628646 ROM1Q03395 351 aa10.84□□□□□ -0.67
SYNGAP1-207ENST00000628646 RBMS2Q15434 407 aaKnown RBP10.84□□□□□ -0.67
SYNGAP1-207ENST00000628646 TEX30Q5JUR7 227 aa10.84□□□□□ -0.67
SYNGAP1-207ENST00000628646 PHYHD1Q5SRE7 291 aa10.84□□□□□ -0.67
SYNGAP1-207ENST00000628646 OR52I2Q8NH67 350 aa10.84□□□□□ -0.67
SYNGAP1-207ENST00000628646 MGAT4CQ9UBM8 478 aa10.84□□□□□ -0.67
SYNGAP1-207ENST00000628646 FOXD3Q9UJU5 478 aaPredicted RBP10.84□□□□□ -0.67
SYNGAP1-207ENST00000628646 ARID1AO14497 2285 aa10.84□□□□□ -0.67
SYNGAP1-207ENST00000628646 IGKV3D-15A0A087WSY6 115 aa10.84□□□□□ -0.67
SYNGAP1-207ENST00000628646 PNPP00491 289 aa10.84□□□□□ -0.67
SYNGAP1-207ENST00000628646 CDK2P24941 298 aa10.84□□□□□ -0.67
SYNGAP1-207ENST00000628646 SNU13P55769 128 aaKnown RBP10.84□□□□□ -0.67
SYNGAP1-207ENST00000628646 FAM166AQ6J272 317 aa10.84□□□□□ -0.67
SYNGAP1-207ENST00000628646 ZNF808Q8N4W9 903 aaPredicted RBP10.84□□□□□ -0.67
SYNGAP1-207ENST00000628646 DNAAF1Q8NEP3 725 aa10.84□□□□□ -0.67
SYNGAP1-207ENST00000628646 OR2AE1Q8NHA4 323 aa10.84□□□□□ -0.67
SYNGAP1-207ENST00000628646 RNASE6Q93091 150 aaKnown RBP10.84□□□□□ -0.67
SYNGAP1-207ENST00000628646 APOBEC3DQ96AK3 386 aaPredicted RBP10.84□□□□□ -0.67
SYNGAP1-207ENST00000628646 BORCS8Q96FH0 119 aa10.84□□□□□ -0.67
SYNGAP1-207ENST00000628646 LINC00470Q9BZP3 86 aa10.84□□□□□ -0.67
SYNGAP1-207ENST00000628646 CHIAQ9BZP6 476 aa10.84□□□□□ -0.67
SYNGAP1-207ENST00000628646 HRASLSQ9HDD0 168 aa10.84□□□□□ -0.67
SYNGAP1-207ENST00000628646 TAS2R4Q9NYW5 299 aa10.84□□□□□ -0.67
SYNGAP1-207ENST00000628646 KLK11Q9UBX7 282 aa10.84□□□□□ -0.67
SYNGAP1-207ENST00000628646 ARPC1BO15143 372 aaKnown RBP10.83□□□□□ -0.68
SYNGAP1-207ENST00000628646 IFNA7P01567 189 aa10.83□□□□□ -0.68
SYNGAP1-207ENST00000628646 AMY2AP04746 511 aa10.83□□□□□ -0.68
SYNGAP1-207ENST00000628646 OR52H1Q8NGJ2 320 aa10.83□□□□□ -0.68
SYNGAP1-207ENST00000628646 OR13C9Q8NGT0 318 aa10.83□□□□□ -0.68
SYNGAP1-207ENST00000628646 PRRT1Q99946 306 aa10.83□□□□□ -0.68
SYNGAP1-207ENST00000628646 PBOV1Q9GZY1 135 aa10.83□□□□□ -0.68
SYNGAP1-207ENST00000628646 UBTD1Q9HAC8 227 aa10.83□□□□□ -0.68
SYNGAP1-207ENST00000628646 GPR84Q9NQS5 396 aa10.83□□□□□ -0.68
SYNGAP1-207ENST00000628646 SESN1Q9Y6P5 492 aa10.83□□□□□ -0.68
SYNGAP1-207ENST00000628646 DCTDP32321 178 aa10.83□□□□□ -0.68
SYNGAP1-207ENST00000628646 DLX5P56178 289 aa10.83□□□□□ -0.68
SYNGAP1-207ENST00000628646 SNRPD2P62316 118 aaKnown RBP10.83□□□□□ -0.68
SYNGAP1-207ENST00000628646 PSG4Q00888 419 aa10.83□□□□□ -0.68
SYNGAP1-207ENST00000628646 IKZF1Q13422 519 aa10.83□□□□□ -0.68
SYNGAP1-207ENST00000628646 C2orf76Q3KRA6 126 aa10.83□□□□□ -0.68
SYNGAP1-207ENST00000628646 CDNFQ49AH0 187 aa10.83□□□□□ -0.68
SYNGAP1-207ENST00000628646 DMRTC1Q5HYR2 192 aa10.83□□□□□ -0.68
SYNGAP1-207ENST00000628646 TMEM123Q8N131 208 aa10.83□□□□□ -0.68
SYNGAP1-207ENST00000628646 FBXL14Q8N1E6 418 aa10.83□□□□□ -0.68
SYNGAP1-207ENST00000628646 OR1M1Q8NGA1 313 aa10.83□□□□□ -0.68
SYNGAP1-207ENST00000628646 SLC23A1Q9UHI7 598 aa10.83□□□□□ -0.68
SYNGAP1-207ENST00000628646 RHBDD3Q9Y3P4 386 aa10.83□□□□□ -0.68
SYNGAP1-207ENST00000628646 PRR14LQ5THK1 2151 aa10.83□□□□□ -0.68
SYNGAP1-207ENST00000628646 A8MXE2 369 aa10.83□□□□□ -0.68
SYNGAP1-207ENST00000628646 MPIG6BO95866 241 aa10.83□□□□□ -0.68
SYNGAP1-207ENST00000628646 CBX5P45973 191 aa10.83□□□□□ -0.68
SYNGAP1-207ENST00000628646 MECP2P51608 486 aaKnown RBP10.83□□□□□ -0.68
SYNGAP1-207ENST00000628646 PLPP7Q8NBV4 271 aa10.83□□□□□ -0.68
SYNGAP1-207ENST00000628646 TMEM54Q969K7 222 aa10.83□□□□□ -0.68
SYNGAP1-207ENST00000628646 ANKRD20A5PA0PJZ0 165 aa10.82□□□□□ -0.68
SYNGAP1-207ENST00000628646 ALX3O95076 343 aa10.82□□□□□ -0.68
SYNGAP1-207ENST00000628646 ZNF93P35789 620 aaPredicted RBP10.82□□□□□ -0.68
SYNGAP1-207ENST00000628646 CNN3Q15417 329 aaKnown RBP10.82□□□□□ -0.68
SYNGAP1-207ENST00000628646 NHLRC1Q6VVB1 395 aa10.82□□□□□ -0.68
SYNGAP1-207ENST00000628646 ZNF767PQ75MW2 155 aa10.82□□□□□ -0.68
SYNGAP1-207ENST00000628646 TMED4Q7Z7H5 227 aa10.82□□□□□ -0.68
SYNGAP1-207ENST00000628646 PLPPR2Q96GM1 343 aa10.82□□□□□ -0.68
SYNGAP1-207ENST00000628646 MICU1Q9BPX6 476 aa10.82□□□□□ -0.68
SYNGAP1-207ENST00000628646 BCL2L14Q9BZR8 327 aa10.82□□□□□ -0.68
SYNGAP1-207ENST00000628646 DECR2Q9NUI1 292 aa10.82□□□□□ -0.68
SYNGAP1-207ENST00000628646 SERPINA5P05154 406 aa10.82□□□□□ -0.68
SYNGAP1-207ENST00000628646 TMEM225BP0DP42 221 aa10.82□□□□□ -0.68
SYNGAP1-207ENST00000628646 TDGF1P3P51864 188 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms