RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 CABLES2Q9BTV7 478 aa11.44□□□□□ -0.58
SCN8A-209ENST00000627620 NARFLQ9H6Q4 476 aa11.44□□□□□ -0.58
SCN8A-209ENST00000627620 MYOZ1Q9NP98 299 aaPredicted RBP11.44□□□□□ -0.58
SCN8A-209ENST00000627620 OCIAD1Q9NX40 245 aa11.44□□□□□ -0.58
SCN8A-209ENST00000627620 TRIM77I1YAP6 450 aa11.43□□□□□ -0.58
SCN8A-209ENST00000627620 FGF9P31371 208 aaPredicted RBP11.43□□□□□ -0.58
SCN8A-209ENST00000627620 PWWP2BQ6NUJ5 590 aa11.43□□□□□ -0.58
SCN8A-209ENST00000627620 OR2T6Q8NHC8 308 aa11.43□□□□□ -0.58
SCN8A-209ENST00000627620 CT62P0C5K7 136 aa11.43□□□□□ -0.58
SCN8A-209ENST00000627620 PTGFRP43088 359 aa11.43□□□□□ -0.58
SCN8A-209ENST00000627620 LIMK1P53667 647 aa11.43□□□□□ -0.58
SCN8A-209ENST00000627620 SMOC1Q9H4F8 434 aa11.43□□□□□ -0.58
SCN8A-209ENST00000627620 TAAR3PQ9P1P4 343 aa11.43□□□□□ -0.58
SCN8A-209ENST00000627620 MAP1BP46821 2468 aaKnown RBP11.43□□□□□ -0.58
SCN8A-209ENST00000627620 G3V3Q6 166 aa11.43□□□□□ -0.58
SCN8A-209ENST00000627620 CDKN2AP42771 156 aaKnown RBP11.43□□□□□ -0.58
SCN8A-209ENST00000627620 GNG10P50151 68 aa11.43□□□□□ -0.58
SCN8A-209ENST00000627620 INSL4Q14641 139 aa11.43□□□□□ -0.58
SCN8A-209ENST00000627620 NCR3LG1Q68D85 454 aa11.43□□□□□ -0.58
SCN8A-209ENST00000627620 CARFQ8N187 725 aa11.43□□□□□ -0.58
SCN8A-209ENST00000627620 RFPL4AA6NLU0 287 aa11.43□□□□□ -0.58
SCN8A-209ENST00000627620 DBX1A6NMT0 343 aa11.43□□□□□ -0.58
SCN8A-209ENST00000627620 RFPL4AL1F8VTS6 287 aa11.43□□□□□ -0.58
SCN8A-209ENST00000627620 HIST1H1DP16402 221 aaKnown RBP11.43□□□□□ -0.58
SCN8A-209ENST00000627620 OR13G1Q8NGZ3 307 aa11.43□□□□□ -0.58
SCN8A-209ENST00000627620 CMBLQ96DG6 245 aa11.43□□□□□ -0.58
SCN8A-209ENST00000627620 EXOGQ9Y2C4 368 aaKnown RBP11.43□□□□□ -0.58
SCN8A-209ENST00000627620 DEFB108AA8MXU0 73 aa11.42□□□□□ -0.58
SCN8A-209ENST00000627620 OR2B8PP59922 312 aa11.42□□□□□ -0.58
SCN8A-209ENST00000627620 CLEC12BQ2HXU8 276 aa11.42□□□□□ -0.58
SCN8A-209ENST00000627620 HES4Q9HCC6 221 aa11.42□□□□□ -0.58
SCN8A-209ENST00000627620 FAM60AQ9NP50 221 aa11.42□□□□□ -0.58
SCN8A-209ENST00000627620 MNX1P50219 401 aaPredicted RBP11.42□□□□□ -0.58
SCN8A-209ENST00000627620 TRIP6Q15654 476 aaKnown RBP11.42□□□□□ -0.58
SCN8A-209ENST00000627620 ZNF141Q15928 474 aa11.42□□□□□ -0.58
SCN8A-209ENST00000627620 CBLN3Q6UW01 205 aa11.42□□□□□ -0.58
SCN8A-209ENST00000627620 MRGPREQ86SM8 312 aa11.42□□□□□ -0.58
SCN8A-209ENST00000627620 SFTPA1Q8IWL2 248 aa11.42□□□□□ -0.58
SCN8A-209ENST00000627620 PLPP3O14495 311 aa11.42□□□□□ -0.58
SCN8A-209ENST00000627620 FABP9Q0Z7S8 132 aa11.42□□□□□ -0.58
SCN8A-209ENST00000627620 C11orf87Q6NUJ2 197 aa11.42□□□□□ -0.58
SCN8A-209ENST00000627620 DEGS2Q6QHC5 323 aa11.42□□□□□ -0.58
SCN8A-209ENST00000627620 MOB1BQ7L9L4 216 aa11.42□□□□□ -0.58
SCN8A-209ENST00000627620 M1APQ8TC57 530 aa11.42□□□□□ -0.58
SCN8A-209ENST00000627620 ERRFI1Q9UJM3 462 aaPredicted RBP11.42□□□□□ -0.58
SCN8A-209ENST00000627620 CROCCQ5TZA2 2017 aa11.42□□□□□ -0.58
SCN8A-209ENST00000627620 A0A1B0GTH9 108 aa11.42□□□□□ -0.58
SCN8A-209ENST00000627620 OR5H15A6NDH6 313 aa11.42□□□□□ -0.58
SCN8A-209ENST00000627620 OR5H1A6NKK0 313 aa11.42□□□□□ -0.58
SCN8A-209ENST00000627620 CDC14BO60729 498 aa11.42□□□□□ -0.58
SCN8A-209ENST00000627620 ONECUT2O95948 504 aa11.42□□□□□ -0.58
SCN8A-209ENST00000627620 ZNF17P17021 662 aa11.42□□□□□ -0.58
SCN8A-209ENST00000627620 SRD5A2P31213 254 aa11.42□□□□□ -0.58
SCN8A-209ENST00000627620 GALNSP34059 522 aa11.42□□□□□ -0.58
SCN8A-209ENST00000627620 CRYBB2P43320 205 aa11.42□□□□□ -0.58
SCN8A-209ENST00000627620 LRFN3Q9BTN0 628 aa11.42□□□□□ -0.58
SCN8A-209ENST00000627620 FAAP24Q9BTP7 215 aa11.42□□□□□ -0.58
SCN8A-209ENST00000627620 NIT2Q9NQR4 276 aa11.42□□□□□ -0.58
SCN8A-209ENST00000627620 FAM90A27PA6NNH2 459 aa11.42□□□□□ -0.58
SCN8A-209ENST00000627620 MASP2O00187 686 aa11.42□□□□□ -0.58
SCN8A-209ENST00000627620 LYZL6O75951 148 aa11.42□□□□□ -0.58
SCN8A-209ENST00000627620 ZIC1Q15915 447 aa11.42□□□□□ -0.58
SCN8A-209ENST00000627620 RFESDQ8TAC1 157 aa11.42□□□□□ -0.58
SCN8A-209ENST00000627620 ESRP2Q9H6T0 727 aaKnown RBP11.42□□□□□ -0.58
SCN8A-209ENST00000627620 GAR1Q9NY12 217 aaKnown RBP11.42□□□□□ -0.58
SCN8A-209ENST00000627620 ECM29Q5VYK3 1845 aa11.41□□□□□ -0.58
SCN8A-209ENST00000627620 MEX3AA1L020 520 aaKnown RBP11.41□□□□□ -0.58
SCN8A-209ENST00000627620 CCL2P13500 99 aa11.41□□□□□ -0.58
SCN8A-209ENST00000627620 CNN1P51911 297 aaKnown RBP11.41□□□□□ -0.58
SCN8A-209ENST00000627620 JMJD6Q6NYC1 403 aaPredicted RBP11.41□□□□□ -0.58
SCN8A-209ENST00000627620 SHROOM3Q8TF72 1996 aa11.41□□□□□ -0.58
SCN8A-209ENST00000627620 K7EQS6 105 aa11.41□□□□□ -0.58
SCN8A-209ENST00000627620 POU2F2P09086 479 aa11.41□□□□□ -0.58
SCN8A-209ENST00000627620 C4orf17Q53FE4 359 aa11.41□□□□□ -0.58
SCN8A-209ENST00000627620 FAM109BQ6ICB4 259 aaPredicted RBP11.41□□□□□ -0.58
SCN8A-209ENST00000627620 ZDHHC22Q8N966 263 aa11.41□□□□□ -0.58
SCN8A-209ENST00000627620 C10orf90Q96M02 699 aa11.41□□□□□ -0.58
SCN8A-209ENST00000627620 SLIRPQ9GZT3 109 aaKnown RBP11.41□□□□□ -0.58
SCN8A-209ENST00000627620 FSCN3Q9NQT6 498 aa11.41□□□□□ -0.58
SCN8A-209ENST00000627620 F5P12259 2224 aa11.41□□□□□ -0.58
SCN8A-209ENST00000627620 NDUFB6O95139 128 aa11.41□□□□□ -0.58
SCN8A-209ENST00000627620 FBP1P09467 338 aa11.41□□□□□ -0.58
SCN8A-209ENST00000627620 HES3Q5TGS1 186 aa11.41□□□□□ -0.58
SCN8A-209ENST00000627620 LYG1Q8N1E2 194 aa11.41□□□□□ -0.58
SCN8A-209ENST00000627620 SIGLECL1Q8N7X8 197 aa11.41□□□□□ -0.58
SCN8A-209ENST00000627620 FCER1GP30273 86 aa11.41□□□□□ -0.58
SCN8A-209ENST00000627620 HMGA2P52926 109 aa11.41□□□□□ -0.58
SCN8A-209ENST00000627620 XAF1Q6GPH4 301 aa11.41□□□□□ -0.58
SCN8A-209ENST00000627620 RHBDD2Q6NTF9 364 aa11.41□□□□□ -0.58
SCN8A-209ENST00000627620 THSD4Q6ZMP0 1018 aa11.41□□□□□ -0.58
SCN8A-209ENST00000627620 C6orf201Q7Z4U5 140 aa11.41□□□□□ -0.58
SCN8A-209ENST00000627620 TMEM56Q96MV1 263 aa11.41□□□□□ -0.58
SCN8A-209ENST00000627620 PRRX2Q99811 253 aa11.41□□□□□ -0.58
SCN8A-209ENST00000627620 TMPRSS13Q9BYE2 586 aa11.41□□□□□ -0.58
SCN8A-209ENST00000627620 PLAC1Q9HBJ0 212 aa11.41□□□□□ -0.58
SCN8A-209ENST00000627620 NHSL1Q5SYE7 1610 aa11.41□□□□□ -0.58
SCN8A-209ENST00000627620 A0A1W2PPQ1 181 aa11.41□□□□□ -0.58
SCN8A-209ENST00000627620 FCGR3BO75015 233 aa11.41□□□□□ -0.58
SCN8A-209ENST00000627620 WNT1P04628 370 aa11.41□□□□□ -0.58
SCN8A-209ENST00000627620 IL9P15248 144 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms