RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 MOV10Q9HCE1 1003 aaKnown RBP8.16□□□□□ -1.1
PDLIM5-223ENST00000627587 DIABLOQ9NR28 239 aa8.16□□□□□ -1.1
PDLIM5-223ENST00000627587 GPR173Q9NS66 373 aa8.16□□□□□ -1.1
PDLIM5-223ENST00000627587 PTTG3PQ9NZH4 202 aa8.16□□□□□ -1.1
PDLIM5-223ENST00000627587 ZFHX3Q15911 3703 aa8.16□□□□□ -1.1
PDLIM5-223ENST00000627587 GGT3PA6NGU5 568 aa8.15□□□□□ -1.1
PDLIM5-223ENST00000627587 A8MXE2 369 aa8.15□□□□□ -1.1
PDLIM5-223ENST00000627587 PLA2G10O15496 165 aa8.15□□□□□ -1.1
PDLIM5-223ENST00000627587 GMDSO60547 372 aa8.15□□□□□ -1.1
PDLIM5-223ENST00000627587 TPPPO94811 219 aa8.15□□□□□ -1.1
PDLIM5-223ENST00000627587 BPNT1O95861 308 aa8.15□□□□□ -1.1
PDLIM5-223ENST00000627587 NRASP01111 189 aa8.15□□□□□ -1.1
PDLIM5-223ENST00000627587 PTHLHP12272 177 aa8.15□□□□□ -1.1
PDLIM5-223ENST00000627587 SPNP16150 400 aa8.15□□□□□ -1.1
PDLIM5-223ENST00000627587 PSMB1P20618 241 aaKnown RBP8.15□□□□□ -1.1
PDLIM5-223ENST00000627587 PRKACBP22694 351 aa8.15□□□□□ -1.1
PDLIM5-223ENST00000627587 CDK2P24941 298 aa8.15□□□□□ -1.1
PDLIM5-223ENST00000627587 OR3A4PP47883 348 aa8.15□□□□□ -1.1
PDLIM5-223ENST00000627587 ASCL1P50553 236 aa8.15□□□□□ -1.1
PDLIM5-223ENST00000627587 MMP15P51511 669 aa8.15□□□□□ -1.1
PDLIM5-223ENST00000627587 FBXL19-AS1Q494R0 122 aa8.15□□□□□ -1.1
PDLIM5-223ENST00000627587 TMEM255AQ5JRV8 349 aa8.15□□□□□ -1.1
PDLIM5-223ENST00000627587 TIMM23BQ5SRD1 257 aa8.15□□□□□ -1.1
PDLIM5-223ENST00000627587 C22orf34Q6ZV56 151 aa8.15□□□□□ -1.1
PDLIM5-223ENST00000627587 KRT74Q7RTS7 529 aa8.15□□□□□ -1.1
PDLIM5-223ENST00000627587 C1QL2Q7Z5L3 287 aa8.15□□□□□ -1.1
PDLIM5-223ENST00000627587 ANGPTL5Q86XS5 388 aa8.15□□□□□ -1.1
PDLIM5-223ENST00000627587 LIX1LQ8IVB5 337 aa8.15□□□□□ -1.1
PDLIM5-223ENST00000627587 FTMTQ8N4E7 242 aa8.15□□□□□ -1.1
PDLIM5-223ENST00000627587 OR56B2PQ8NGI1 322 aa8.15□□□□□ -1.1
PDLIM5-223ENST00000627587 C15orf40Q8WUR7 153 aa8.15□□□□□ -1.1
PDLIM5-223ENST00000627587 GCDHQ92947 438 aaPredicted RBP8.15□□□□□ -1.1
PDLIM5-223ENST00000627587 RNASE6Q93091 150 aaKnown RBP8.15□□□□□ -1.1
PDLIM5-223ENST00000627587 PTX4Q96A99 478 aa8.15□□□□□ -1.1
PDLIM5-223ENST00000627587 TECTBQ96PL2 329 aa8.15□□□□□ -1.1
PDLIM5-223ENST00000627587 MRPS28Q9Y2Q9 187 aaKnown RBP8.15□□□□□ -1.1
PDLIM5-223ENST00000627587 A6NNC1 897 aa8.15□□□□□ -1.11
PDLIM5-223ENST00000627587 CTDSPLO15194 276 aa8.15□□□□□ -1.11
PDLIM5-223ENST00000627587 XRCC3O43542 346 aa8.15□□□□□ -1.11
PDLIM5-223ENST00000627587 SMPD2O60906 423 aa8.15□□□□□ -1.11
PDLIM5-223ENST00000627587 LILRA1O75019 489 aa8.15□□□□□ -1.11
PDLIM5-223ENST00000627587 PTTG1O95997 202 aa8.15□□□□□ -1.11
PDLIM5-223ENST00000627587 IGLV1-44P01699 117 aa8.15□□□□□ -1.11
PDLIM5-223ENST00000627587 UBBP0CG47 229 aa8.15□□□□□ -1.11
PDLIM5-223ENST00000627587 VSIG8P0DPA2 414 aa8.15□□□□□ -1.11
PDLIM5-223ENST00000627587 RAB6AP20340 208 aa8.15□□□□□ -1.11
PDLIM5-223ENST00000627587 CCKARP32238 428 aa8.15□□□□□ -1.11
PDLIM5-223ENST00000627587 MNDAP41218 407 aa8.15□□□□□ -1.11
PDLIM5-223ENST00000627587 RFX2P48378 723 aa8.15□□□□□ -1.11
PDLIM5-223ENST00000627587 DGCR2P98153 550 aa8.15□□□□□ -1.11
PDLIM5-223ENST00000627587 TAB1Q15750 504 aa8.15□□□□□ -1.11
PDLIM5-223ENST00000627587 GLIPR1L1Q6UWM5 242 aa8.15□□□□□ -1.11
PDLIM5-223ENST00000627587 SEZ6L2Q6UXD5 910 aa8.15□□□□□ -1.11
PDLIM5-223ENST00000627587 UNQ6126/PRO20091Q6UXV3 157 aa8.15□□□□□ -1.11
PDLIM5-223ENST00000627587 FAM169BQ8N8A8 192 aa8.15□□□□□ -1.11
PDLIM5-223ENST00000627587 RELL2Q8NC24 303 aaPredicted RBP8.15□□□□□ -1.11
PDLIM5-223ENST00000627587 CSNK2A3Q8NEV1 391 aa8.15□□□□□ -1.11
PDLIM5-223ENST00000627587 PIGCQ92535 297 aa8.15□□□□□ -1.11
PDLIM5-223ENST00000627587 YIPF5Q969M3 257 aa8.15□□□□□ -1.11
PDLIM5-223ENST00000627587 PIGTQ969N2 578 aa8.15□□□□□ -1.11
PDLIM5-223ENST00000627587 RFT1Q96AA3 541 aa8.15□□□□□ -1.11
PDLIM5-223ENST00000627587 BORCS8Q96FH0 119 aa8.15□□□□□ -1.11
PDLIM5-223ENST00000627587 CYYR1Q96J86 154 aa8.15□□□□□ -1.11
PDLIM5-223ENST00000627587 THAP7Q9BT49 309 aaPredicted RBP8.15□□□□□ -1.11
PDLIM5-223ENST00000627587 C1QTNF6Q9BXI9 259 aa8.15□□□□□ -1.11
PDLIM5-223ENST00000627587 FGF23Q9GZV9 251 aaPredicted RBP8.15□□□□□ -1.11
PDLIM5-223ENST00000627587 ATG5Q9H1Y0 275 aa8.15□□□□□ -1.11
PDLIM5-223ENST00000627587 OR51B6Q9H340 312 aa8.15□□□□□ -1.11
PDLIM5-223ENST00000627587 MYEF2Q9P2K5 600 aaKnown RBP8.15□□□□□ -1.11
PDLIM5-223ENST00000627587 SLC7A11Q9UPY5 501 aa8.15□□□□□ -1.11
PDLIM5-223ENST00000627587 SLC25A15Q9Y619 301 aa8.15□□□□□ -1.11
PDLIM5-223ENST00000627587 CADP27708 2225 aa8.14□□□□□ -1.11
PDLIM5-223ENST00000627587 NIPBLQ6KC79 2804 aaeCLIP8.14□□□□□ -1.11
PDLIM5-223ENST00000627587 PRRC2AP48634 2157 aaKnown RBP8.14□□□□□ -1.11
PDLIM5-223ENST00000627587 A0A1W2PP11 408 aa8.14□□□□□ -1.11
PDLIM5-223ENST00000627587 METTL21EPA6NDL7 271 aa8.14□□□□□ -1.11
PDLIM5-223ENST00000627587 TMEM14DPA8MWL7 114 aa8.14□□□□□ -1.11
PDLIM5-223ENST00000627587 NAT2P11245 290 aa8.14□□□□□ -1.11
PDLIM5-223ENST00000627587 ZNF35P13682 527 aa8.14□□□□□ -1.11
PDLIM5-223ENST00000627587 PTGFRP43088 359 aa8.14□□□□□ -1.11
PDLIM5-223ENST00000627587 RBP2P50120 134 aa8.14□□□□□ -1.11
PDLIM5-223ENST00000627587 MTCP1P56278 107 aa8.14□□□□□ -1.11
PDLIM5-223ENST00000627587 TAS2R20P59543 309 aa8.14□□□□□ -1.11
PDLIM5-223ENST00000627587 ZP1P60852 638 aa8.14□□□□□ -1.11
PDLIM5-223ENST00000627587 ERVS71-1P61550 626 aa8.14□□□□□ -1.11
PDLIM5-223ENST00000627587 MRPS10P82664 201 aaKnown RBP8.14□□□□□ -1.11
PDLIM5-223ENST00000627587 MOGAT2Q3SYC2 334 aa8.14□□□□□ -1.11
PDLIM5-223ENST00000627587 PLCXD3Q63HM9 321 aa8.14□□□□□ -1.11
PDLIM5-223ENST00000627587 DNM1P46Q6ZS02 220 aa8.14□□□□□ -1.11
PDLIM5-223ENST00000627587 LHFPL2Q6ZUX7 228 aa8.14□□□□□ -1.11
PDLIM5-223ENST00000627587 GDPD3Q7L5L3 318 aa8.14□□□□□ -1.11
PDLIM5-223ENST00000627587 RTN4RL2Q86UN3 420 aa8.14□□□□□ -1.11
PDLIM5-223ENST00000627587 TMEM104Q8NE00 496 aa8.14□□□□□ -1.11
PDLIM5-223ENST00000627587 STEAP2Q8NFT2 490 aa8.14□□□□□ -1.11
PDLIM5-223ENST00000627587 NRGNQ92686 78 aa8.14□□□□□ -1.11
PDLIM5-223ENST00000627587 S100PBPQ96BU1 408 aa8.14□□□□□ -1.11
PDLIM5-223ENST00000627587 MUCL1Q96DR8 90 aa8.14□□□□□ -1.11
PDLIM5-223ENST00000627587 S100A13Q99584 98 aa8.14□□□□□ -1.11
PDLIM5-223ENST00000627587 PAPOLGQ9BWT3 736 aaKnown RBP8.14□□□□□ -1.11
PDLIM5-223ENST00000627587 AUNIPQ9H7T9 357 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms