RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 OPN4Q9UHM6 478 aa13.95□□□□□ -0.18
UBE3D-208ENST00000626828 SLC7A11Q9UPY5 501 aa13.95□□□□□ -0.18
UBE3D-208ENST00000626828 AUP1Q9Y679 476 aa13.95□□□□□ -0.18
UBE3D-208ENST00000626828 SVEP1Q4LDE5 3571 aa13.94□□□□□ -0.18
UBE3D-208ENST00000626828 IGHV3OR15-7A0A075B7D8 119 aa13.94□□□□□ -0.18
UBE3D-208ENST00000626828 A6NIN4 97 aa13.94□□□□□ -0.18
UBE3D-208ENST00000626828 AKR7A2O43488 359 aa13.94□□□□□ -0.18
UBE3D-208ENST00000626828 ISG15P05161 165 aa13.94□□□□□ -0.18
UBE3D-208ENST00000626828 DCKP27707 260 aa13.94□□□□□ -0.18
UBE3D-208ENST00000626828 CAPGP40121 348 aa13.94□□□□□ -0.18
UBE3D-208ENST00000626828 KIR3DL2P43630 455 aa13.94□□□□□ -0.18
UBE3D-208ENST00000626828 PAX2Q02962 417 aa13.94□□□□□ -0.18
UBE3D-208ENST00000626828 SMN1Q16637 294 aaKnown RBP13.94□□□□□ -0.18
UBE3D-208ENST00000626828 DMRTC1Q5HYR2 192 aa13.94□□□□□ -0.18
UBE3D-208ENST00000626828 ATPAF1Q5TC12 328 aaPredicted RBP13.94□□□□□ -0.18
UBE3D-208ENST00000626828 SLC36A1Q7Z2H8 476 aa13.94□□□□□ -0.18
UBE3D-208ENST00000626828 C1QL2Q7Z5L3 287 aa13.94□□□□□ -0.18
UBE3D-208ENST00000626828 RDH10Q8IZV5 341 aa13.94□□□□□ -0.18
UBE3D-208ENST00000626828 HAVCR2Q8TDQ0 301 aa13.94□□□□□ -0.18
UBE3D-208ENST00000626828 AQP3Q92482 292 aa13.94□□□□□ -0.18
UBE3D-208ENST00000626828 ZNF649Q9BS31 505 aa13.94□□□□□ -0.18
UBE3D-208ENST00000626828 DNTTIP1Q9H147 329 aa13.94□□□□□ -0.18
UBE3D-208ENST00000626828 RASL12Q9NYN1 266 aa13.94□□□□□ -0.18
UBE3D-208ENST00000626828 DNAJB11Q9UBS4 358 aa13.94□□□□□ -0.18
UBE3D-208ENST00000626828 IGHV2-70DA0A0C4DH43 119 aa13.93□□□□□ -0.18
UBE3D-208ENST00000626828 ANKRD61A6NGH8 418 aa13.93□□□□□ -0.18
UBE3D-208ENST00000626828 ERICH4A6NGS2 130 aa13.93□□□□□ -0.18
UBE3D-208ENST00000626828 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.93□□□□□ -0.18
UBE3D-208ENST00000626828 TMPRSS2O15393 492 aa13.93□□□□□ -0.18
UBE3D-208ENST00000626828 LIPFP07098 398 aa13.93□□□□□ -0.18
UBE3D-208ENST00000626828 GLRA1P23415 457 aa13.93□□□□□ -0.18
UBE3D-208ENST00000626828 GBX2P52951 348 aaPredicted RBP13.93□□□□□ -0.18
UBE3D-208ENST00000626828 NANOS3P60323 173 aaKnown RBP13.93□□□□□ -0.18
UBE3D-208ENST00000626828 ALKBH1Q13686 389 aaKnown RBP13.93□□□□□ -0.18
UBE3D-208ENST00000626828 HAGHLQ6PII5 290 aaPredicted RBP13.93□□□□□ -0.18
UBE3D-208ENST00000626828 CNIH3Q8TBE1 160 aa13.93□□□□□ -0.18
UBE3D-208ENST00000626828 TECTBQ96PL2 329 aa13.93□□□□□ -0.18
UBE3D-208ENST00000626828 CCL13Q99616 98 aa13.93□□□□□ -0.18
UBE3D-208ENST00000626828 NUDT16L1Q9BRJ7 211 aaKnown RBP13.93□□□□□ -0.18
UBE3D-208ENST00000626828 JAM3Q9BX67 310 aa13.93□□□□□ -0.18
UBE3D-208ENST00000626828 RASSF4Q9H2L5 321 aa13.93□□□□□ -0.18
UBE3D-208ENST00000626828 ISG20L2Q9H9L3 353 aaKnown RBP13.93□□□□□ -0.18
UBE3D-208ENST00000626828 CTSZQ9UBR2 303 aa13.93□□□□□ -0.18
UBE3D-208ENST00000626828 NKX1-2Q9UD57 310 aaPredicted RBP13.93□□□□□ -0.18
UBE3D-208ENST00000626828 LOC107986453A0A1B0GWG9 222 aa13.92□□□□□ -0.18
UBE3D-208ENST00000626828 PQLC2LA1A4F0 135 aa13.92□□□□□ -0.18
UBE3D-208ENST00000626828 H3BSH0 61 aa13.92□□□□□ -0.18
UBE3D-208ENST00000626828 RHBDL1O75783 438 aa13.92□□□□□ -0.18
UBE3D-208ENST00000626828 GATBO75879 557 aaKnown RBP13.92□□□□□ -0.18
UBE3D-208ENST00000626828 ECDO95905 644 aaPredicted RBP13.92□□□□□ -0.18
UBE3D-208ENST00000626828 PPIAL4GP0DN37 164 aa13.92□□□□□ -0.18
UBE3D-208ENST00000626828 HAAOP46952 286 aa13.92□□□□□ -0.18
UBE3D-208ENST00000626828 TGM4P49221 684 aa13.92□□□□□ -0.18
UBE3D-208ENST00000626828 FUT6P51993 359 aa13.92□□□□□ -0.18
UBE3D-208ENST00000626828 GMFBP60983 142 aa13.92□□□□□ -0.18
UBE3D-208ENST00000626828 C8orf59Q8N0T1 100 aaPredicted RBP13.92□□□□□ -0.18
UBE3D-208ENST00000626828 OR5T2Q8NGG2 359 aa13.92□□□□□ -0.18
UBE3D-208ENST00000626828 PP6455Q8WZ26 134 aa13.92□□□□□ -0.18
UBE3D-208ENST00000626828 DACT3Q96B18 629 aaPredicted RBP13.92□□□□□ -0.18
UBE3D-208ENST00000626828 TMIGD2Q96BF3 282 aa13.92□□□□□ -0.18
UBE3D-208ENST00000626828 SEH1LQ96EE3 360 aa13.92□□□□□ -0.18
UBE3D-208ENST00000626828 MED30Q96HR3 178 aa13.92□□□□□ -0.18
UBE3D-208ENST00000626828 WDR13Q9H1Z4 485 aa13.92□□□□□ -0.18
UBE3D-208ENST00000626828 OCEL1Q9H607 264 aa13.92□□□□□ -0.18
UBE3D-208ENST00000626828 HHLA2Q9UM44 414 aa13.92□□□□□ -0.18
UBE3D-208ENST00000626828 OR4C45A6NMZ5 311 aa13.91□□□□□ -0.18
UBE3D-208ENST00000626828 DVL1O14640 695 aa13.91□□□□□ -0.18
UBE3D-208ENST00000626828 GPR37O15354 613 aa13.91□□□□□ -0.18
UBE3D-208ENST00000626828 ENSAO43768 121 aaKnown RBP13.91□□□□□ -0.18
UBE3D-208ENST00000626828 NOS1APO75052 506 aaPredicted RBP13.91□□□□□ -0.18
UBE3D-208ENST00000626828 ACAA1P09110 424 aaPredicted RBP13.91□□□□□ -0.18
UBE3D-208ENST00000626828 LIMS3P0CW19 117 aa13.91□□□□□ -0.18
UBE3D-208ENST00000626828 LIMS4P0CW20 117 aa13.91□□□□□ -0.18
UBE3D-208ENST00000626828 ADRA2CP18825 462 aa13.91□□□□□ -0.18
UBE3D-208ENST00000626828 FPR2P25090 351 aa13.91□□□□□ -0.18
UBE3D-208ENST00000626828 MED21Q13503 144 aa13.91□□□□□ -0.18
UBE3D-208ENST00000626828 UBE2V2Q15819 145 aa13.91□□□□□ -0.18
UBE3D-208ENST00000626828 TMPRSS11AQ6ZMR5 421 aa13.91□□□□□ -0.18
UBE3D-208ENST00000626828 ZNF676Q8N7Q3 588 aa13.91□□□□□ -0.18
UBE3D-208ENST00000626828 FGGYQ96C11 551 aa13.91□□□□□ -0.18
UBE3D-208ENST00000626828 CHST5Q9GZS9 411 aa13.91□□□□□ -0.18
UBE3D-208ENST00000626828 SNTG1Q9NSN8 517 aa13.91□□□□□ -0.18
UBE3D-208ENST00000626828 CHCHD3Q9NX63 227 aaKnown RBP13.91□□□□□ -0.18
UBE3D-208ENST00000626828 NLKQ9UBE8 527 aa13.91□□□□□ -0.18
UBE3D-208ENST00000626828 POLDIP2Q9Y2S7 368 aa13.91□□□□□ -0.18
UBE3D-208ENST00000626828 CAB39Q9Y376 341 aaPredicted RBP13.91□□□□□ -0.18
UBE3D-208ENST00000626828 A0A0A6YYJ9 748 aa13.9□□□□□ -0.18
UBE3D-208ENST00000626828 FAM230AA0A1W2PPH8 454 aa13.9□□□□□ -0.18
UBE3D-208ENST00000626828 OR2AT4A6NND4 320 aa13.9□□□□□ -0.18
UBE3D-208ENST00000626828 H0YJX3 145 aa13.9□□□□□ -0.18
UBE3D-208ENST00000626828 J3QT63 122 aa13.9□□□□□ -0.18
UBE3D-208ENST00000626828 NDUFB3O43676 98 aa13.9□□□□□ -0.18
UBE3D-208ENST00000626828 TCF21O43680 179 aa13.9□□□□□ -0.18
UBE3D-208ENST00000626828 CCDC159P0C7I6 412 aa13.9□□□□□ -0.18
UBE3D-208ENST00000626828 STUMQ69YW2 141 aa13.9□□□□□ -0.18
UBE3D-208ENST00000626828 ZNF788Q6ZQV5 615 aa13.9□□□□□ -0.18
UBE3D-208ENST00000626828 PNLDC1Q8NA58 520 aaKnown RBP13.9□□□□□ -0.18
UBE3D-208ENST00000626828 POC1AQ8NBT0 407 aa13.9□□□□□ -0.18
UBE3D-208ENST00000626828 ANGPTL6Q8NI99 470 aa13.9□□□□□ -0.18
UBE3D-208ENST00000626828 TMEM158Q8WZ71 300 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms