RNA–Protein interactions for RNA: ENST00000622045.4

SYNRG-231, Transcript of synergin gamma, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNRG-231	ENST00000622045	CHAT	P28329	748 aa		12.7	□□□□□ -0.38
SYNRG-231	ENST00000622045	SP6	Q3SY56	376 aa		12.7	□□□□□ -0.38
SYNRG-231	ENST00000622045	REC114	Q7Z4M0	266 aa		12.7	□□□□□ -0.38
SYNRG-231	ENST00000622045	ABHD12B	Q7Z5M8	362 aa	Predicted RBP	12.7	□□□□□ -0.38
SYNRG-231	ENST00000622045	NTNG2	Q96CW9	530 aa		12.7	□□□□□ -0.38
SYNRG-231	ENST00000622045	SOX7	Q9BT81	388 aa		12.7	□□□□□ -0.38
SYNRG-231	ENST00000622045	SCRT1	Q9BWW7	348 aa		12.7	□□□□□ -0.38
SYNRG-231	ENST00000622045	NELFA	Q9H3P2	528 aa		12.7	□□□□□ -0.38
SYNRG-231	ENST00000622045	WFDC1	Q9HC57	220 aa		12.7	□□□□□ -0.38
SYNRG-231	ENST00000622045	PIAS3	Q9Y6X2	628 aa		12.7	□□□□□ -0.38
SYNRG-231	ENST00000622045	PPP1R2P9	O14990	202 aa		12.69	□□□□□ -0.38
SYNRG-231	ENST00000622045	THBS4	P35443	961 aa		12.69	□□□□□ -0.38
SYNRG-231	ENST00000622045	PLXDC2	Q6UX71	529 aa		12.69	□□□□□ -0.38
SYNRG-231	ENST00000622045	SHISA6	Q6ZSJ9	500 aa		12.69	□□□□□ -0.38
SYNRG-231	ENST00000622045	RNASE11	Q8TAA1	199 aa	Known RBP	12.69	□□□□□ -0.38
SYNRG-231	ENST00000622045	NPRL2	Q8WTW4	380 aa		12.69	□□□□□ -0.38
SYNRG-231	ENST00000622045	SCGB3A2	Q96PL1	93 aa		12.69	□□□□□ -0.38
SYNRG-231	ENST00000622045	ELL3	Q9HB65	397 aa	Predicted RBP	12.69	□□□□□ -0.38
SYNRG-231	ENST00000622045	IGKV1D-43	A0A0B4J1Z2	117 aa		12.69	□□□□□ -0.38
SYNRG-231	ENST00000622045	LOC390937	A0A1W2PQ73	354 aa		12.69	□□□□□ -0.38
SYNRG-231	ENST00000622045	CYB5B	O43169	146 aa		12.69	□□□□□ -0.38
SYNRG-231	ENST00000622045	TTR	P02766	147 aa		12.69	□□□□□ -0.38
SYNRG-231	ENST00000622045	TRGC2	P03986	189 aa		12.69	□□□□□ -0.38
SYNRG-231	ENST00000622045	OPN1LW	P04000	364 aa		12.69	□□□□□ -0.38
SYNRG-231	ENST00000622045	TBP	P20226	339 aa		12.69	□□□□□ -0.38
SYNRG-231	ENST00000622045	PTGER4	P35408	488 aa		12.69	□□□□□ -0.38
SYNRG-231	ENST00000622045	DAP3	P51398	398 aa	Known RBP	12.69	□□□□□ -0.38
SYNRG-231	ENST00000622045	OPN5	Q6U736	354 aa		12.69	□□□□□ -0.38
SYNRG-231	ENST00000622045		Q8WTZ3	238 aa		12.69	□□□□□ -0.38
SYNRG-231	ENST00000622045	MALSU1	Q96EH3	234 aa		12.69	□□□□□ -0.38
SYNRG-231	ENST00000622045	LPAR5	Q9H1C0	372 aa		12.69	□□□□□ -0.38
SYNRG-231	ENST00000622045	FAM86C1	Q9NVL1	165 aa		12.69	□□□□□ -0.38
SYNRG-231	ENST00000622045	HS3ST3B1	Q9Y662	390 aa		12.69	□□□□□ -0.38
SYNRG-231	ENST00000622045	CHRM2	P08172	466 aa		12.69	□□□□□ -0.38
SYNRG-231	ENST00000622045	MDK	P21741	143 aa	Predicted RBP	12.69	□□□□□ -0.38
SYNRG-231	ENST00000622045	FPR2	P25090	351 aa		12.69	□□□□□ -0.38
SYNRG-231	ENST00000622045	CAPZB	P47756	277 aa		12.69	□□□□□ -0.38
SYNRG-231	ENST00000622045	OR3A4P	P47883	348 aa		12.69	□□□□□ -0.38
SYNRG-231	ENST00000622045	DCAF7	P61962	342 aa		12.69	□□□□□ -0.38
SYNRG-231	ENST00000622045	LSM6	P62312	80 aa	Known RBP	12.69	□□□□□ -0.38
SYNRG-231	ENST00000622045	NKX6-1	P78426	367 aa	Predicted RBP	12.69	□□□□□ -0.38
SYNRG-231	ENST00000622045	HAGH	Q16775	308 aa		12.69	□□□□□ -0.38
SYNRG-231	ENST00000622045	C1orf189	Q5VU69	101 aa		12.69	□□□□□ -0.38
SYNRG-231	ENST00000622045	LMX1A	Q8TE12	382 aa		12.69	□□□□□ -0.38
SYNRG-231	ENST00000622045	ZNF721	Q8TF20	911 aa		12.69	□□□□□ -0.38
SYNRG-231	ENST00000622045	TMEM234	Q8WY98	164 aa		12.69	□□□□□ -0.38
SYNRG-231	ENST00000622045	C11orf40	Q8WZ69	217 aa		12.69	□□□□□ -0.38
SYNRG-231	ENST00000622045	REEP6	Q96HR9	211 aa		12.69	□□□□□ -0.38
SYNRG-231	ENST00000622045	TMEM59	Q9BXS4	323 aa		12.69	□□□□□ -0.38
SYNRG-231	ENST00000622045	LANCL2	Q9NS86	450 aa		12.69	□□□□□ -0.38
SYNRG-231	ENST00000622045	RHBDD3	Q9Y3P4	386 aa		12.69	□□□□□ -0.38
SYNRG-231	ENST00000622045		H0YL77	283 aa		12.68	□□□□□ -0.38
SYNRG-231	ENST00000622045	PHOX2A	O14813	284 aa		12.68	□□□□□ -0.38
SYNRG-231	ENST00000622045	HIST1H2BK	O60814	126 aa		12.68	□□□□□ -0.38
SYNRG-231	ENST00000622045	DDAH2	O95865	285 aa		12.68	□□□□□ -0.38
SYNRG-231	ENST00000622045	HIST1H2BJ	P06899	126 aa		12.68	□□□□□ -0.38
SYNRG-231	ENST00000622045	HIST1H2BO	P23527	126 aa		12.68	□□□□□ -0.38
SYNRG-231	ENST00000622045	HIST1H2BB	P33778	126 aa		12.68	□□□□□ -0.38
SYNRG-231	ENST00000622045	MMP16	P51512	607 aa		12.68	□□□□□ -0.38
SYNRG-231	ENST00000622045	SNU13	P55769	128 aa	Known RBP	12.68	□□□□□ -0.38
SYNRG-231	ENST00000622045	HIST1H2BD	P58876	126 aa		12.68	□□□□□ -0.38
SYNRG-231	ENST00000622045	UBE2K	P61086	200 aa		12.68	□□□□□ -0.38
SYNRG-231	ENST00000622045	HIST1H2BC	P62807	126 aa		12.68	□□□□□ -0.38
SYNRG-231	ENST00000622045	SLC35A1	P78382	337 aa		12.68	□□□□□ -0.38
SYNRG-231	ENST00000622045	CCL20	P78556	96 aa		12.68	□□□□□ -0.38
SYNRG-231	ENST00000622045	HIST2H2BE	Q16778	126 aa		12.68	□□□□□ -0.38
SYNRG-231	ENST00000622045	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	12.68	□□□□□ -0.38
SYNRG-231	ENST00000622045	C16orf47	Q6ZP98	133 aa	Predicted RBP	12.68	□□□□□ -0.38
SYNRG-231	ENST00000622045	TGIF2LX	Q8IUE1	241 aa		12.68	□□□□□ -0.38
SYNRG-231	ENST00000622045	C9orf40	Q8IXQ3	194 aa		12.68	□□□□□ -0.38
SYNRG-231	ENST00000622045	DEFB119	Q8N690	84 aa		12.68	□□□□□ -0.38
SYNRG-231	ENST00000622045	OR2AJ1	Q8NGZ0	328 aa		12.68	□□□□□ -0.38
SYNRG-231	ENST00000622045	HIST1H2BH	Q93079	126 aa		12.68	□□□□□ -0.38
SYNRG-231	ENST00000622045	HIST1H2BN	Q99877	126 aa		12.68	□□□□□ -0.38
SYNRG-231	ENST00000622045	HIST1H2BM	Q99879	126 aa		12.68	□□□□□ -0.38
SYNRG-231	ENST00000622045	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	12.68	□□□□□ -0.38
SYNRG-231	ENST00000622045	PISD	Q9UG56	409 aa		12.68	□□□□□ -0.38
SYNRG-231	ENST00000622045	ARGFX	A6NJG6	315 aa		12.68	□□□□□ -0.38
SYNRG-231	ENST00000622045	SNRPC	P09234	159 aa	Known RBP	12.68	□□□□□ -0.38
SYNRG-231	ENST00000622045	GABRG2	P18507	467 aa		12.68	□□□□□ -0.38
SYNRG-231	ENST00000622045	BID	P55957	195 aa		12.68	□□□□□ -0.38
SYNRG-231	ENST00000622045	AADACL3	Q5VUY0	350 aa		12.68	□□□□□ -0.38
SYNRG-231	ENST00000622045	OR2T2	Q6IF00	324 aa		12.68	□□□□□ -0.38
SYNRG-231	ENST00000622045	H1FNT	Q75WM6	255 aa	Predicted RBP	12.68	□□□□□ -0.38
SYNRG-231	ENST00000622045	TMEM156	Q8N614	296 aa		12.68	□□□□□ -0.38
SYNRG-231	ENST00000622045	ZNF701	Q9NV72	531 aa	Predicted RBP	12.68	□□□□□ -0.38
SYNRG-231	ENST00000622045	ZNF878	C9JN71	531 aa		12.68	□□□□□ -0.38
SYNRG-231	ENST00000622045	MASP2	O00187	686 aa		12.68	□□□□□ -0.38
SYNRG-231	ENST00000622045	HEXB	P07686	556 aa		12.68	□□□□□ -0.38
SYNRG-231	ENST00000622045	GALNS	P34059	522 aa		12.68	□□□□□ -0.38
SYNRG-231	ENST00000622045	TMEM50B	P56557	158 aa		12.68	□□□□□ -0.38
SYNRG-231	ENST00000622045	QRFP	P83859	136 aa		12.68	□□□□□ -0.38
SYNRG-231	ENST00000622045	HSF1	Q00613	529 aa		12.68	□□□□□ -0.38
SYNRG-231	ENST00000622045	ACY1	Q03154	408 aa		12.68	□□□□□ -0.38
SYNRG-231	ENST00000622045	DEGS2	Q6QHC5	323 aa		12.68	□□□□□ -0.38
SYNRG-231	ENST00000622045	OIT3	Q8WWZ8	545 aa		12.68	□□□□□ -0.38
SYNRG-231	ENST00000622045	RAB39B	Q96DA2	213 aa		12.68	□□□□□ -0.38
SYNRG-231	ENST00000622045	MUCL1	Q96DR8	90 aa		12.68	□□□□□ -0.38
SYNRG-231	ENST00000622045	ABHD14A	Q9BUJ0	271 aa		12.68	□□□□□ -0.38
SYNRG-231	ENST00000622045	LRRC61	Q9BV99	259 aa		12.68	□□□□□ -0.38

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