RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 ZNF43P17038 809 aa13.85□□□□□ -0.19
NPHP4-211ENST00000622020 SMAD4Q13485 552 aaKnown RBP13.85□□□□□ -0.19
NPHP4-211ENST00000622020 PHLDA2Q53GA4 152 aa13.85□□□□□ -0.19
NPHP4-211ENST00000622020 ZNF529Q6P280 563 aa13.85□□□□□ -0.19
NPHP4-211ENST00000622020 CDCA3Q99618 268 aaPredicted RBP13.85□□□□□ -0.19
NPHP4-211ENST00000622020 PECRQ9BY49 303 aa13.85□□□□□ -0.19
NPHP4-211ENST00000622020 SPACA1Q9HBV2 294 aa13.85□□□□□ -0.19
NPHP4-211ENST00000622020 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.85□□□□□ -0.193e-6■■■■□ 23.4
NPHP4-211ENST00000622020 RCL1Q9Y2P8 373 aaKnown RBP13.85□□□□□ -0.19
NPHP4-211ENST00000622020 B3GALT1Q9Y5Z6 326 aa13.85□□□□□ -0.19
NPHP4-211ENST00000622020 A0A1B0GX78 115 aa13.85□□□□□ -0.19
NPHP4-211ENST00000622020 PGA4P0DJD7 388 aa13.85□□□□□ -0.19
NPHP4-211ENST00000622020 PGA3P0DJD8 388 aa13.85□□□□□ -0.19
NPHP4-211ENST00000622020 TMEM225BP0DP42 221 aa13.85□□□□□ -0.19
NPHP4-211ENST00000622020 ZP4Q12836 540 aa13.85□□□□□ -0.19
NPHP4-211ENST00000622020 TAF9Q16594 264 aa13.85□□□□□ -0.19
NPHP4-211ENST00000622020 EIF2S3LQ2VIR3 472 aaKnown RBP13.85□□□□□ -0.19
NPHP4-211ENST00000622020 AWAT1Q58HT5 328 aa13.85□□□□□ -0.19
NPHP4-211ENST00000622020 THEM4Q5T1C6 240 aa13.85□□□□□ -0.19
NPHP4-211ENST00000622020 GGNBP1Q5YKI7 109 aa13.85□□□□□ -0.19
NPHP4-211ENST00000622020 MISPQ8IVT2 679 aa13.85□□□□□ -0.19
NPHP4-211ENST00000622020 MRPL38Q96DV4 380 aaKnown RBP13.85□□□□□ -0.19
NPHP4-211ENST00000622020 OCSTAMPQ9BR26 566 aa13.85□□□□□ -0.19
NPHP4-211ENST00000622020 FAAP24Q9BTP7 215 aa13.85□□□□□ -0.19
NPHP4-211ENST00000622020 CNTNAP3Q9BZ76 1288 aa13.85□□□□□ -0.19
NPHP4-211ENST00000622020 SDHAF3Q9NRP4 125 aa13.85□□□□□ -0.19
NPHP4-211ENST00000622020 SMCO4Q9NRQ5 59 aa13.85□□□□□ -0.19
NPHP4-211ENST00000622020 NXT1Q9UKK6 140 aaKnown RBP13.85□□□□□ -0.19
NPHP4-211ENST00000622020 FBXO7Q9Y3I1 522 aa13.85□□□□□ -0.19
NPHP4-211ENST00000622020 ZNF726A6NNF4 738 aa13.84□□□□□ -0.19
NPHP4-211ENST00000622020 C1orf196B1AJZ1 125 aa13.84□□□□□ -0.19
NPHP4-211ENST00000622020 SPRY1O43609 319 aaPredicted RBP13.84□□□□□ -0.19
NPHP4-211ENST00000622020 OR2J2O76002 312 aa13.84□□□□□ -0.19
NPHP4-211ENST00000622020 PET100P0DJ07 73 aa13.84□□□□□ -0.19
NPHP4-211ENST00000622020 CLDN17P56750 224 aa13.84□□□□□ -0.19
NPHP4-211ENST00000622020 FAM24BQ8N5W8 94 aa13.84□□□□□ -0.19
NPHP4-211ENST00000622020 NOXO1Q8NFA2 376 aa13.84□□□□□ -0.19
NPHP4-211ENST00000622020 TSTD1Q8NFU3 115 aa13.84□□□□□ -0.19
NPHP4-211ENST00000622020 ST8SIA1Q92185 356 aa13.84□□□□□ -0.19
NPHP4-211ENST00000622020 LYZL4Q96KX0 146 aa13.84□□□□□ -0.19
NPHP4-211ENST00000622020 BCL2L14Q9BZR8 327 aa13.84□□□□□ -0.19
NPHP4-211ENST00000622020 SH3BGRL3Q9H299 93 aa13.84□□□□□ -0.19
NPHP4-211ENST00000622020 ZNF160Q9HCG1 818 aa13.84□□□□□ -0.19
NPHP4-211ENST00000622020 ALKBH4Q9NXW9 302 aa13.84□□□□□ -0.19
NPHP4-211ENST00000622020 IGHV1OR21-1A0A087WYE8 117 aa13.84□□□□□ -0.19
NPHP4-211ENST00000622020 CCDC85CA6NKD9 419 aa13.84□□□□□ -0.19
NPHP4-211ENST00000622020 SHISA7A6NL88 538 aa13.84□□□□□ -0.19
NPHP4-211ENST00000622020 G3V3Y1 287 aa13.84□□□□□ -0.19
NPHP4-211ENST00000622020 OR13C7P0DN81 318 aa13.84□□□□□ -0.19
NPHP4-211ENST00000622020 FOSL2P15408 326 aa13.84□□□□□ -0.19
NPHP4-211ENST00000622020 PNLIPP16233 465 aa13.84□□□□□ -0.19
NPHP4-211ENST00000622020 ZNF14P17017 642 aaPredicted RBP13.84□□□□□ -0.19
NPHP4-211ENST00000622020 FABP9Q0Z7S8 132 aa13.84□□□□□ -0.19
NPHP4-211ENST00000622020 EIF5AL1Q6IS14 154 aaKnown RBP13.84□□□□□ -0.19
NPHP4-211ENST00000622020 BTNL8Q6UX41 500 aa13.84□□□□□ -0.19
NPHP4-211ENST00000622020 PEG10Q86TG7 708 aaKnown RBP13.84□□□□□ -0.19
NPHP4-211ENST00000622020 LHFPL1Q86WI0 220 aa13.84□□□□□ -0.19
NPHP4-211ENST00000622020 OR2AE1Q8NHA4 323 aa13.84□□□□□ -0.19
NPHP4-211ENST00000622020 HIST1H2BAQ96A08 127 aa13.84□□□□□ -0.19
NPHP4-211ENST00000622020 LIME1Q9H400 295 aa13.84□□□□□ -0.19
NPHP4-211ENST00000622020 CACFD1Q9UGQ2 172 aa13.84□□□□□ -0.19
NPHP4-211ENST00000622020 CCDC163A0A0D9SF12 145 aa13.83□□□□□ -0.19
NPHP4-211ENST00000622020 TIAF1O95411 115 aa13.83□□□□□ -0.19
NPHP4-211ENST00000622020 HEXBP07686 556 aa13.83□□□□□ -0.19
NPHP4-211ENST00000622020 OGFOD3Q6PK18 319 aa13.83□□□□□ -0.19
NPHP4-211ENST00000622020 OR9K2Q8NGE7 335 aa13.83□□□□□ -0.19
NPHP4-211ENST00000622020 SAT2Q96F10 170 aaPredicted RBP13.83□□□□□ -0.19
NPHP4-211ENST00000622020 SCGB3A2Q96PL1 93 aa13.83□□□□□ -0.19
NPHP4-211ENST00000622020 CHRDQ9H2X0 955 aa13.83□□□□□ -0.19
NPHP4-211ENST00000622020 RGCCQ9H4X1 137 aa13.83□□□□□ -0.19
NPHP4-211ENST00000622020 GPR27Q9NS67 375 aa13.83□□□□□ -0.19
NPHP4-211ENST00000622020 PIGLQ9Y2B2 252 aa13.83□□□□□ -0.19
NPHP4-211ENST00000622020 ZNF850A8MQ14 1090 aa13.83□□□□□ -0.2
NPHP4-211ENST00000622020 CD5P06127 495 aa13.83□□□□□ -0.2
NPHP4-211ENST00000622020 NQO2P16083 231 aa13.83□□□□□ -0.2
NPHP4-211ENST00000622020 PTAFRP25105 342 aa13.83□□□□□ -0.2
NPHP4-211ENST00000622020 SULT1A2P50226 295 aa13.83□□□□□ -0.2
NPHP4-211ENST00000622020 SGPP2Q8IWX5 399 aa13.83□□□□□ -0.2
NPHP4-211ENST00000622020 POC1BQ8TC44 478 aa13.83□□□□□ -0.2
NPHP4-211ENST00000622020 SLC22A8Q8TCC7 542 aa13.83□□□□□ -0.2
NPHP4-211ENST00000622020 OIT3Q8WWZ8 545 aa13.83□□□□□ -0.2
NPHP4-211ENST00000622020 PRRX2Q99811 253 aa13.83□□□□□ -0.2
NPHP4-211ENST00000622020 WDR77Q9BQA1 342 aaPredicted RBP13.83□□□□□ -0.2
NPHP4-211ENST00000622020 GPR173Q9NS66 373 aa13.83□□□□□ -0.2
NPHP4-211ENST00000622020 C1orf123Q9NWV4 160 aa13.83□□□□□ -0.2
NPHP4-211ENST00000622020 MEMO1Q9Y316 297 aa13.83□□□□□ -0.2
NPHP4-211ENST00000622020 FAM230AA0A1W2PPH8 454 aa13.82□□□□□ -0.2
NPHP4-211ENST00000622020 C7orf77A4D0Y5 90 aa13.82□□□□□ -0.2
NPHP4-211ENST00000622020 ZNHIT1O43257 154 aa13.82□□□□□ -0.2
NPHP4-211ENST00000622020 CST4P01036 141 aa13.82□□□□□ -0.2
NPHP4-211ENST00000622020 GSK3AP49840 483 aa13.82□□□□□ -0.2
NPHP4-211ENST00000622020 ZNF600Q6ZNG1 722 aa13.82□□□□□ -0.2
NPHP4-211ENST00000622020 RBM24Q9BX46 236 aaKnown RBP13.82□□□□□ -0.2
NPHP4-211ENST00000622020 PNRC2Q9NPJ4 139 aaKnown RBP13.82□□□□□ -0.2
NPHP4-211ENST00000622020 WDFY4Q6ZS81 3184 aa13.82□□□□□ -0.2
NPHP4-211ENST00000622020 A0A1W2PPE2 198 aa13.82□□□□□ -0.2
NPHP4-211ENST00000622020 C2CD4DB7Z1M9 353 aa13.82□□□□□ -0.2
NPHP4-211ENST00000622020 TRAF3IP2O43734 574 aaPredicted RBP13.82□□□□□ -0.2
NPHP4-211ENST00000622020 DVL1P1P54792 670 aaPredicted RBP13.82□□□□□ -0.2
NPHP4-211ENST00000622020 PIGPP57054 158 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms