RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 KCNE3Q9Y6H6 103 aa8.73□□□□□ -1.01
CLTCL1-211ENST00000621271 A0A1B0GTL3 188 aa8.73□□□□□ -1.01
CLTCL1-211ENST00000621271 A0A1W2PQF6 199 aa8.73□□□□□ -1.01
CLTCL1-211ENST00000621271 AQP7P3A6NL99 342 aa8.73□□□□□ -1.01
CLTCL1-211ENST00000621271 CYTIPO60759 359 aa8.73□□□□□ -1.01
CLTCL1-211ENST00000621271 CCL2P13500 99 aa8.73□□□□□ -1.01
CLTCL1-211ENST00000621271 LGALS7P47929 136 aa8.73□□□□□ -1.01
CLTCL1-211ENST00000621271 TLE1Q04724 770 aa8.73□□□□□ -1.01
CLTCL1-211ENST00000621271 PRSS45Q7RTY3 260 aa8.73□□□□□ -1.01
CLTCL1-211ENST00000621271 ZNF547Q8IVP9 402 aa8.73□□□□□ -1.01
CLTCL1-211ENST00000621271 SPICQ8N5J4 248 aa8.73□□□□□ -1.01
CLTCL1-211ENST00000621271 RFESDQ8TAC1 157 aa8.73□□□□□ -1.01
CLTCL1-211ENST00000621271 GPX8Q8TED1 209 aa8.73□□□□□ -1.01
CLTCL1-211ENST00000621271 MITD1Q8WV92 249 aa8.73□□□□□ -1.01
CLTCL1-211ENST00000621271 ASXL3Q9C0F0 2248 aa8.73□□□□□ -1.01
CLTCL1-211ENST00000621271 RER1O15258 196 aa8.73□□□□□ -1.01
CLTCL1-211ENST00000621271 IL5P05113 134 aa8.73□□□□□ -1.01
CLTCL1-211ENST00000621271 FMODQ06828 376 aa8.73□□□□□ -1.01
CLTCL1-211ENST00000621271 OR5I1Q13606 314 aa8.73□□□□□ -1.01
CLTCL1-211ENST00000621271 RSPO4Q2I0M5 234 aaPredicted RBP8.73□□□□□ -1.01
CLTCL1-211ENST00000621271 SLC25A30Q5SVS4 291 aa8.73□□□□□ -1.01
CLTCL1-211ENST00000621271 OR2G3Q8NGZ4 309 aa8.73□□□□□ -1.01
CLTCL1-211ENST00000621271 OTOSQ8NHW6 89 aa8.73□□□□□ -1.01
CLTCL1-211ENST00000621271 MAP6Q96JE9 813 aa8.73□□□□□ -1.01
CLTCL1-211ENST00000621271 SF3B5Q9BWJ5 86 aaKnown RBP8.73□□□□□ -1.01
CLTCL1-211ENST00000621271 OR6C3Q9NZP0 311 aa8.73□□□□□ -1.01
CLTCL1-211ENST00000621271 NKX2-8O15522 239 aa8.73□□□□□ -1.01
CLTCL1-211ENST00000621271 FBP1P09467 338 aa8.73□□□□□ -1.01
CLTCL1-211ENST00000621271 CDK5R1Q15078 307 aa8.73□□□□□ -1.01
CLTCL1-211ENST00000621271 TERB2Q8NHR7 220 aa8.73□□□□□ -1.01
CLTCL1-211ENST00000621271 HMGCLL1Q8TB92 370 aa8.73□□□□□ -1.01
CLTCL1-211ENST00000621271 NUDCD2Q8WVJ2 157 aa8.73□□□□□ -1.01
CLTCL1-211ENST00000621271 RASL11BQ9BPW5 248 aa8.73□□□□□ -1.01
CLTCL1-211ENST00000621271 TUBG2Q9NRH3 451 aa8.73□□□□□ -1.01
CLTCL1-211ENST00000621271 LRP12Q9Y561 859 aa8.73□□□□□ -1.01
CLTCL1-211ENST00000621271 LRRC3CA6NJW4 275 aa8.72□□□□□ -1.01
CLTCL1-211ENST00000621271 YBX1P67809 324 aaKnown RBP8.72□□□□□ -1.01
CLTCL1-211ENST00000621271 DGCR2P98153 550 aa8.72□□□□□ -1.01
CLTCL1-211ENST00000621271 FABP5Q01469 135 aa8.72□□□□□ -1.01
CLTCL1-211ENST00000621271 ZBTB44Q8NCP5 570 aa8.72□□□□□ -1.01
CLTCL1-211ENST00000621271 SFT2D1Q8WV19 159 aa8.72□□□□□ -1.01
CLTCL1-211ENST00000621271 SEBOXQ9HB31 216 aaPredicted RBP8.72□□□□□ -1.01
CLTCL1-211ENST00000621271 IL36GQ9NZH8 169 aa8.72□□□□□ -1.01
CLTCL1-211ENST00000621271 CHST2Q9Y4C5 530 aa8.72□□□□□ -1.01
CLTCL1-211ENST00000621271 CASP8AP2Q9UKL3 1982 aa8.72□□□□□ -1.01
CLTCL1-211ENST00000621271 SERPINE3A8MV23 424 aa8.72□□□□□ -1.01
CLTCL1-211ENST00000621271 GGTLC2Q14390 218 aa8.72□□□□□ -1.01
CLTCL1-211ENST00000621271 C2orf76Q3KRA6 126 aa8.72□□□□□ -1.01
CLTCL1-211ENST00000621271 OR10R2Q8NGX6 335 aa8.72□□□□□ -1.01
CLTCL1-211ENST00000621271 OR8U1Q8NH10 309 aa8.72□□□□□ -1.01
CLTCL1-211ENST00000621271 DDA1Q9BW61 102 aa8.72□□□□□ -1.01
CLTCL1-211ENST00000621271 PECRQ9BY49 303 aa8.72□□□□□ -1.01
CLTCL1-211ENST00000621271 AAMDCQ9H7C9 122 aa8.72□□□□□ -1.01
CLTCL1-211ENST00000621271 PATZ1Q9HBE1 687 aaKnown RBP8.72□□□□□ -1.01
CLTCL1-211ENST00000621271 CLN8Q9UBY8 286 aa8.72□□□□□ -1.01
CLTCL1-211ENST00000621271 ASPDHA6ND91 283 aa8.72□□□□□ -1.01
CLTCL1-211ENST00000621271 OR5B21A6NL26 309 aa8.72□□□□□ -1.01
CLTCL1-211ENST00000621271 PDGFBP01127 241 aaPredicted RBP8.72□□□□□ -1.01
CLTCL1-211ENST00000621271 IGHV4-34P06331 123 aa8.72□□□□□ -1.01
CLTCL1-211ENST00000621271 IAPPP10997 89 aa8.72□□□□□ -1.01
CLTCL1-211ENST00000621271 KCNJ3P48549 501 aa8.72□□□□□ -1.01
CLTCL1-211ENST00000621271 TMEM267Q0VDI3 215 aaPredicted RBP8.72□□□□□ -1.01
CLTCL1-211ENST00000621271 ACOT6Q3I5F7 207 aaPredicted RBP8.72□□□□□ -1.01
CLTCL1-211ENST00000621271 TEX261Q6UWH6 196 aa8.72□□□□□ -1.01
CLTCL1-211ENST00000621271 ASCL5Q7RTU5 278 aa8.72□□□□□ -1.01
CLTCL1-211ENST00000621271 APH1BQ8WW43 257 aa8.72□□□□□ -1.01
CLTCL1-211ENST00000621271 GMPPAQ96IJ6 420 aaPredicted RBP8.72□□□□□ -1.01
CLTCL1-211ENST00000621271 OR8B4Q96RC9 309 aa8.72□□□□□ -1.01
CLTCL1-211ENST00000621271 DNAJB12Q9NXW2 375 aaKnown RBP8.72□□□□□ -1.01
CLTCL1-211ENST00000621271 U3KQ87 197 aa8.72□□□□□ -1.01
CLTCL1-211ENST00000621271 TRIOBPQ9H2D6 2365 aa8.72□□□□□ -1.01
CLTCL1-211ENST00000621271 PRSS44E7EML9 344 aa8.72□□□□□ -1.01
CLTCL1-211ENST00000621271 H3BMH7 237 aa8.72□□□□□ -1.01
CLTCL1-211ENST00000621271 SPINT1O43278 529 aa8.72□□□□□ -1.01
CLTCL1-211ENST00000621271 METTL15P1P0C7V9 234 aa8.72□□□□□ -1.01
CLTCL1-211ENST00000621271 MPGP29372 298 aa8.72□□□□□ -1.01
CLTCL1-211ENST00000621271 CD300CQ08708 224 aa8.72□□□□□ -1.01
CLTCL1-211ENST00000621271 AANATQ16613 207 aa8.72□□□□□ -1.01
CLTCL1-211ENST00000621271 SOHLH1Q5JUK2 328 aa8.72□□□□□ -1.01
CLTCL1-211ENST00000621271 CALHM3Q86XJ0 350 aa8.72□□□□□ -1.01
CLTCL1-211ENST00000621271 WDR31Q8NA23 367 aa8.72□□□□□ -1.01
CLTCL1-211ENST00000621271 C10orf90Q96M02 699 aa8.72□□□□□ -1.01
CLTCL1-211ENST00000621271 ARHGDIGQ99819 225 aa8.72□□□□□ -1.01
CLTCL1-211ENST00000621271 SLC25A32Q9H2D1 315 aa8.72□□□□□ -1.01
CLTCL1-211ENST00000621271 ZNF331Q9NQX6 463 aaPredicted RBP8.72□□□□□ -1.01
CLTCL1-211ENST00000621271 MED9Q9NWA0 146 aa8.72□□□□□ -1.01
CLTCL1-211ENST00000621271 DEFB108AA8MXU0 73 aa8.71□□□□□ -1.01
CLTCL1-211ENST00000621271 SSSCA1O60232 199 aa8.71□□□□□ -1.01
CLTCL1-211ENST00000621271 SCO1O75880 301 aa8.71□□□□□ -1.01
CLTCL1-211ENST00000621271 EPPINO95925 133 aa8.71□□□□□ -1.01
CLTCL1-211ENST00000621271 HOXA4Q00056 320 aaPredicted RBP8.71□□□□□ -1.01
CLTCL1-211ENST00000621271 IGFBP7Q16270 282 aa8.71□□□□□ -1.01
CLTCL1-211ENST00000621271 H3F3CQ6NXT2 135 aa8.71□□□□□ -1.01
CLTCL1-211ENST00000621271 ACSM6Q6P461 480 aa8.71□□□□□ -1.01
CLTCL1-211ENST00000621271 CLDN23Q96B33 292 aa8.71□□□□□ -1.01
CLTCL1-211ENST00000621271 MISP3Q96FF7 219 aa8.71□□□□□ -1.01
CLTCL1-211ENST00000621271 NIPSNAP3BQ9BS92 247 aa8.71□□□□□ -1.01
CLTCL1-211ENST00000621271 CHST6Q9GZX3 395 aa8.71□□□□□ -1.01
CLTCL1-211ENST00000621271 MPC1Q9Y5U8 109 aa8.71□□□□□ -1.01
CLTCL1-211ENST00000621271 LOXHD1Q8IVV2 1947 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms