RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 UBE2MP61081 183 aaKnown RBP10.13□□□□□ -0.79
CLIP1-219ENST00000620786 SKA3Q8IX90 412 aa10.13□□□□□ -0.79
CLIP1-219ENST00000620786 AUNIPQ9H7T9 357 aa10.13□□□□□ -0.79
CLIP1-219ENST00000620786 LRRC3CA6NJW4 275 aa10.12□□□□□ -0.79
CLIP1-219ENST00000620786 GIPP09681 153 aaPredicted RBP10.12□□□□□ -0.79
CLIP1-219ENST00000620786 PNLIPP16233 465 aa10.12□□□□□ -0.79
CLIP1-219ENST00000620786 RPL12P30050 165 aaKnown RBP10.12□□□□□ -0.79
CLIP1-219ENST00000620786 Q3ZCU0 254 aa10.12□□□□□ -0.79
CLIP1-219ENST00000620786 GPR32P1Q8NGA4 272 aa10.12□□□□□ -0.79
CLIP1-219ENST00000620786 TMEM171Q8WVE6 324 aa10.12□□□□□ -0.79
CLIP1-219ENST00000620786 C20orf24Q9BUV8 137 aa10.12□□□□□ -0.79
CLIP1-219ENST00000620786 SAP30LQ9HAJ7 183 aa10.12□□□□□ -0.79
CLIP1-219ENST00000620786 MYO5AQ9Y4I1 1855 aaKnown RBP10.12□□□□□ -0.79
CLIP1-219ENST00000620786 A0A1W2PQF6 199 aa10.12□□□□□ -0.79
CLIP1-219ENST00000620786 KRBOX1C9JBD0 128 aa10.12□□□□□ -0.79
CLIP1-219ENST00000620786 OR4E1P0C645 316 aa10.12□□□□□ -0.79
CLIP1-219ENST00000620786 SP9P0CG40 484 aa10.12□□□□□ -0.79
CLIP1-219ENST00000620786 SULT1A3P0DMM9 295 aa10.12□□□□□ -0.79
CLIP1-219ENST00000620786 SULT1A4P0DMN0 295 aa10.12□□□□□ -0.79
CLIP1-219ENST00000620786 KIR2DS2P43631 304 aa10.12□□□□□ -0.79
CLIP1-219ENST00000620786 SLC25A35Q3KQZ1 300 aa10.12□□□□□ -0.79
CLIP1-219ENST00000620786 TOR2AQ5JU69 321 aa10.12□□□□□ -0.79
CLIP1-219ENST00000620786 C1orf185Q5T7R7 199 aa10.12□□□□□ -0.79
CLIP1-219ENST00000620786 TMEM123Q8N131 208 aa10.12□□□□□ -0.79
CLIP1-219ENST00000620786 V9GYS6 101 aa10.12□□□□□ -0.79
CLIP1-219ENST00000620786 FAM157AC9JC47 383 aa10.12□□□□□ -0.79
CLIP1-219ENST00000620786 EML2O95834 649 aa10.12□□□□□ -0.79
CLIP1-219ENST00000620786 PLAC9Q5JTB6 97 aa10.12□□□□□ -0.79
CLIP1-219ENST00000620786 PTPMT1Q8WUK0 201 aaPredicted RBP10.12□□□□□ -0.79
CLIP1-219ENST00000620786 C12orf10Q9HB07 376 aa10.12□□□□□ -0.79
CLIP1-219ENST00000620786 KCNMB2Q9Y691 235 aa10.12□□□□□ -0.79
CLIP1-219ENST00000620786 TRAV1-2A0A0B4J238 106 aa10.12□□□□□ -0.79
CLIP1-219ENST00000620786 A0A1B0GTH9 108 aa10.12□□□□□ -0.79
CLIP1-219ENST00000620786 UBE2L5PA0A1B0GUS4 154 aa10.12□□□□□ -0.79
CLIP1-219ENST00000620786 SEC14L6B5MCN3 397 aa10.12□□□□□ -0.79
CLIP1-219ENST00000620786 JTBO76095 146 aa10.12□□□□□ -0.79
CLIP1-219ENST00000620786 SP1P08047 785 aa10.12□□□□□ -0.79
CLIP1-219ENST00000620786 OR4A8P0C604 315 aa10.12□□□□□ -0.79
CLIP1-219ENST00000620786 CBLN3Q6UW01 205 aa10.12□□□□□ -0.79
CLIP1-219ENST00000620786 CALHM3Q86XJ0 350 aa10.12□□□□□ -0.79
CLIP1-219ENST00000620786 GRAMD2BQ96HH9 432 aa10.12□□□□□ -0.79
CLIP1-219ENST00000620786 AAMDCQ9H7C9 122 aa10.12□□□□□ -0.79
CLIP1-219ENST00000620786 NTMQ9P121 344 aa10.12□□□□□ -0.79
CLIP1-219ENST00000620786 FLVCR2Q9UPI3 526 aa10.12□□□□□ -0.79
CLIP1-219ENST00000620786 ANKRD12Q6UB98 2062 aa10.12□□□□□ -0.79
CLIP1-219ENST00000620786 KRASP01116 189 aa10.12□□□□□ -0.79
CLIP1-219ENST00000620786 IGHV4-34P06331 123 aa10.12□□□□□ -0.79
CLIP1-219ENST00000620786 LIMK1P53667 647 aa10.12□□□□□ -0.79
CLIP1-219ENST00000620786 PHYHD1Q5SRE7 291 aa10.12□□□□□ -0.79
CLIP1-219ENST00000620786 PRR27Q6MZM9 219 aa10.12□□□□□ -0.79
CLIP1-219ENST00000620786 LYG2Q86SG7 212 aa10.12□□□□□ -0.79
CLIP1-219ENST00000620786 CDH26Q8IXH8 852 aa10.12□□□□□ -0.79
CLIP1-219ENST00000620786 MRGPRDQ8TDS7 321 aa10.12□□□□□ -0.79
CLIP1-219ENST00000620786 SLC35B4Q969S0 331 aa10.12□□□□□ -0.79
CLIP1-219ENST00000620786 C2orf50Q96LR7 162 aa10.12□□□□□ -0.79
CLIP1-219ENST00000620786 ZNF416Q9BWM5 594 aa10.12□□□□□ -0.79
CLIP1-219ENST00000620786 WDR54Q9H977 334 aa10.12□□□□□ -0.79
CLIP1-219ENST00000620786 MRPS18BQ9Y676 258 aaKnown RBP10.12□□□□□ -0.79
CLIP1-219ENST00000620786 UBR3Q6ZT12 1888 aa10.12□□□□□ -0.79
CLIP1-219ENST00000620786 OIP5O43482 229 aa10.11□□□□□ -0.79
CLIP1-219ENST00000620786 KCNJ3P48549 501 aa10.11□□□□□ -0.79
CLIP1-219ENST00000620786 WNT3P56703 355 aa10.11□□□□□ -0.79
CLIP1-219ENST00000620786 GUCA2AQ02747 115 aa10.11□□□□□ -0.79
CLIP1-219ENST00000620786 ZNF425Q6IV72 752 aa10.11□□□□□ -0.79
CLIP1-219ENST00000620786 BTNL8Q6UX41 500 aa10.11□□□□□ -0.79
CLIP1-219ENST00000620786 TIPARPQ7Z3E1 657 aaKnown RBP10.11□□□□□ -0.79
CLIP1-219ENST00000620786 OR2W3Q7Z3T1 314 aa10.11□□□□□ -0.79
CLIP1-219ENST00000620786 GLCCI1Q86VQ1 547 aa10.11□□□□□ -0.79
CLIP1-219ENST00000620786 ADGRG7Q96K78 797 aa10.11□□□□□ -0.79
CLIP1-219ENST00000620786 DERL3Q96Q80 235 aa10.11□□□□□ -0.79
CLIP1-219ENST00000620786 TMEM147Q9BVK8 224 aa10.11□□□□□ -0.79
CLIP1-219ENST00000620786 SF3B5Q9BWJ5 86 aaKnown RBP10.11□□□□□ -0.79
CLIP1-219ENST00000620786 SHANK3Q9BYB0 1731 aa10.11□□□□□ -0.79
CLIP1-219ENST00000620786 C16orf97H3BN30 126 aa10.11□□□□□ -0.79
CLIP1-219ENST00000620786 SLC17A2O00624 439 aa10.11□□□□□ -0.79
CLIP1-219ENST00000620786 IL5P05113 134 aa10.11□□□□□ -0.79
CLIP1-219ENST00000620786 PRR35P0CG20 571 aa10.11□□□□□ -0.79
CLIP1-219ENST00000620786 SKP2Q13309 424 aa10.11□□□□□ -0.79
CLIP1-219ENST00000620786 ZNF787Q6DD87 383 aa10.11□□□□□ -0.79
CLIP1-219ENST00000620786 HIST2H3AQ71DI3 136 aa10.11□□□□□ -0.79
CLIP1-219ENST00000620786 MOGAT3Q86VF5 341 aa10.11□□□□□ -0.79
CLIP1-219ENST00000620786 SFTPA2Q8IWL1 248 aa10.11□□□□□ -0.79
CLIP1-219ENST00000620786 WDR31Q8NA23 367 aa10.11□□□□□ -0.79
CLIP1-219ENST00000620786 OR6X1Q8NH79 312 aa10.11□□□□□ -0.79
CLIP1-219ENST00000620786 ZNRF4Q8WWF5 429 aa10.11□□□□□ -0.79
CLIP1-219ENST00000620786 ICAM5Q9UMF0 924 aa10.11□□□□□ -0.79
CLIP1-219ENST00000620786 A0A1W2PQD3 144 aa10.11□□□□□ -0.79
CLIP1-219ENST00000620786 TOX4O94842 621 aa10.11□□□□□ -0.79
CLIP1-219ENST00000620786 EPXP11678 715 aa10.11□□□□□ -0.79
CLIP1-219ENST00000620786 S100A4P26447 101 aaKnown RBP10.11□□□□□ -0.79
CLIP1-219ENST00000620786 PSMB6P28072 239 aa10.11□□□□□ -0.79
CLIP1-219ENST00000620786 CALCRP30988 508 aa10.11□□□□□ -0.79
CLIP1-219ENST00000620786 BRS3P32247 399 aa10.11□□□□□ -0.79
CLIP1-219ENST00000620786 C12orf73Q69YU5 71 aa10.11□□□□□ -0.79
CLIP1-219ENST00000620786 TMEM229BQ8NBD8 167 aa10.11□□□□□ -0.79
CLIP1-219ENST00000620786 MARC2Q969Z3 335 aa10.11□□□□□ -0.79
CLIP1-219ENST00000620786 ZNF230Q9UIE0 474 aaPredicted RBP10.11□□□□□ -0.79
CLIP1-219ENST00000620786 SIPA1L3O60292 1781 aaPredicted RBP10.11□□□□□ -0.79
CLIP1-219ENST00000620786 MOSPD3O75425 235 aa10.11□□□□□ -0.79
CLIP1-219ENST00000620786 MPZL1O95297 269 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms