RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 DNM1P46Q6ZS02 220 aa4.51□□□□□ -1.69
SHMT1-211ENST00000618902 SLC16A14Q7RTX9 510 aa4.51□□□□□ -1.69
SHMT1-211ENST00000618902 SLC16A9Q7RTY1 509 aa4.51□□□□□ -1.69
SHMT1-211ENST00000618902 FAM220AQ7Z4H9 259 aa4.51□□□□□ -1.69
SHMT1-211ENST00000618902 LINC00346Q8IVM7 164 aa4.51□□□□□ -1.69
SHMT1-211ENST00000618902 CDH26Q8IXH8 852 aa4.51□□□□□ -1.69
SHMT1-211ENST00000618902 UXS1Q8NBZ7 420 aa4.51□□□□□ -1.69
SHMT1-211ENST00000618902 OR2T4Q8NH00 348 aa4.51□□□□□ -1.69
SHMT1-211ENST00000618902 TRMT10AQ8TBZ6 339 aaKnown RBP4.51□□□□□ -1.69
SHMT1-211ENST00000618902 GPR148Q8TDV2 347 aa4.51□□□□□ -1.69
SHMT1-211ENST00000618902 SMIM4Q8WVI0 70 aa4.51□□□□□ -1.69
SHMT1-211ENST00000618902 NEU4Q8WWR8 484 aaPredicted RBP4.51□□□□□ -1.69
SHMT1-211ENST00000618902 ZMYND19Q96E35 227 aaPredicted RBP4.51□□□□□ -1.69
SHMT1-211ENST00000618902 MAP6Q96JE9 813 aa4.51□□□□□ -1.69
SHMT1-211ENST00000618902 POM121L2Q96KW2 1035 aa4.51□□□□□ -1.69
SHMT1-211ENST00000618902 C4orf36Q96KX1 117 aa4.51□□□□□ -1.69
SHMT1-211ENST00000618902 PGLYRP3Q96LB9 341 aa4.51□□□□□ -1.69
SHMT1-211ENST00000618902 SORCS2Q96PQ0 1159 aa4.51□□□□□ -1.69
SHMT1-211ENST00000618902 AMELYQ99218 206 aa4.51□□□□□ -1.69
SHMT1-211ENST00000618902 RAB1BQ9H0U4 201 aa4.51□□□□□ -1.69
SHMT1-211ENST00000618902 OR51V1Q9H2C8 321 aa4.51□□□□□ -1.69
SHMT1-211ENST00000618902 OR51J1Q9H342 316 aa4.51□□□□□ -1.69
SHMT1-211ENST00000618902 POFUT1Q9H488 388 aa4.51□□□□□ -1.69
SHMT1-211ENST00000618902 PLK3Q9H4B4 646 aa4.51□□□□□ -1.69
SHMT1-211ENST00000618902 TMEM165Q9HC07 324 aa4.51□□□□□ -1.69
SHMT1-211ENST00000618902 PNRC2Q9NPJ4 139 aaKnown RBP4.51□□□□□ -1.69
SHMT1-211ENST00000618902 CA10Q9NS85 328 aa4.51□□□□□ -1.69
SHMT1-211ENST00000618902 MED9Q9NWA0 146 aa4.51□□□□□ -1.69
SHMT1-211ENST00000618902 TMEM160Q9NX00 188 aa4.51□□□□□ -1.69
SHMT1-211ENST00000618902 NUP50Q9UKX7 468 aa4.51□□□□□ -1.69
SHMT1-211ENST00000618902 LAMP3Q9UQV4 416 aa4.51□□□□□ -1.69
SHMT1-211ENST00000618902 KLHDC2Q9Y2U9 406 aa4.51□□□□□ -1.69
SHMT1-211ENST00000618902 NPTNQ9Y639 398 aa4.51□□□□□ -1.69
SHMT1-211ENST00000618902 V9GY05 133 aa4.51□□□□□ -1.69
SHMT1-211ENST00000618902 MEIKINA0A087WXM9 373 aa4.5□□□□□ -1.69
SHMT1-211ENST00000618902 A0A0A6YYJ9 748 aa4.5□□□□□ -1.69
SHMT1-211ENST00000618902 A0A0G2JMP0 313 aa4.5□□□□□ -1.69
SHMT1-211ENST00000618902 A0A0X1KG70 313 aa4.5□□□□□ -1.69
SHMT1-211ENST00000618902 LOC390937A0A1W2PQ73 354 aa4.5□□□□□ -1.69
SHMT1-211ENST00000618902 TMEM212A6NML5 194 aa4.5□□□□□ -1.69
SHMT1-211ENST00000618902 IFITM5A6NNB3 132 aa4.5□□□□□ -1.69
SHMT1-211ENST00000618902 HMSDA8MTL9 139 aa4.5□□□□□ -1.69
SHMT1-211ENST00000618902 FABP7O15540 132 aa4.5□□□□□ -1.69
SHMT1-211ENST00000618902 SELENOFO60613 162 aa4.5□□□□□ -1.69
SHMT1-211ENST00000618902 RBBP9O75884 186 aa4.5□□□□□ -1.69
SHMT1-211ENST00000618902 SCGNO76038 276 aa4.5□□□□□ -1.69
SHMT1-211ENST00000618902 PAHP00439 452 aa4.5□□□□□ -1.69
SHMT1-211ENST00000618902 LALBAP00709 142 aa4.5□□□□□ -1.69
SHMT1-211ENST00000618902 NGFP01138 241 aa4.5□□□□□ -1.69
SHMT1-211ENST00000618902 HEXAP06865 529 aa4.5□□□□□ -1.69
SHMT1-211ENST00000618902 DBHP09172 617 aa4.5□□□□□ -1.69
SHMT1-211ENST00000618902 SULT1A3P0DMM9 295 aa4.5□□□□□ -1.69
SHMT1-211ENST00000618902 SULT1A4P0DMN0 295 aa4.5□□□□□ -1.69
SHMT1-211ENST00000618902 OR3A3P47888 321 aa4.5□□□□□ -1.69
SHMT1-211ENST00000618902 GDI2P50395 445 aaKnown RBP4.5□□□□□ -1.69
SHMT1-211ENST00000618902 FABP6P51161 128 aa4.5□□□□□ -1.69
SHMT1-211ENST00000618902 HCCSP53701 268 aa4.5□□□□□ -1.69
SHMT1-211ENST00000618902 OR12D2P58182 307 aa4.5□□□□□ -1.69
SHMT1-211ENST00000618902 RAP2BP61225 183 aa4.5□□□□□ -1.69
SHMT1-211ENST00000618902 ERVS71-1P61550 626 aa4.5□□□□□ -1.69
SHMT1-211ENST00000618902 LSM6P62312 80 aaKnown RBP4.5□□□□□ -1.69
SHMT1-211ENST00000618902 GALK2Q01415 458 aa4.5□□□□□ -1.69
SHMT1-211ENST00000618902 ZNF85Q03923 595 aa4.5□□□□□ -1.69
SHMT1-211ENST00000618902 P2RY14Q15391 338 aa4.5□□□□□ -1.69
SHMT1-211ENST00000618902 MST1LQ2TV78 715 aa4.5□□□□□ -1.69
SHMT1-211ENST00000618902 PCGF3Q3KNV8 242 aa4.5□□□□□ -1.69
SHMT1-211ENST00000618902 Q499Y3 187 aa4.5□□□□□ -1.69
SHMT1-211ENST00000618902 CLLU1Q5K131 121 aa4.5□□□□□ -1.69
SHMT1-211ENST00000618902 CLVS2Q5SYC1 327 aa4.5□□□□□ -1.69
SHMT1-211ENST00000618902 DNM1P34Q6PK57 102 aa4.5□□□□□ -1.69
SHMT1-211ENST00000618902 TEX261Q6UWH6 196 aa4.5□□□□□ -1.69
SHMT1-211ENST00000618902 RFPL4BQ6ZWI9 263 aa4.5□□□□□ -1.69
SHMT1-211ENST00000618902 RHOUQ7L0Q8 258 aa4.5□□□□□ -1.69
SHMT1-211ENST00000618902 KRT74Q7RTS7 529 aa4.5□□□□□ -1.69
SHMT1-211ENST00000618902 LRP11Q86VZ4 500 aa4.5□□□□□ -1.69
SHMT1-211ENST00000618902 KRTAP1-3Q8IUG1 177 aa4.5□□□□□ -1.69
SHMT1-211ENST00000618902 CCDC28AQ8IWP9 274 aa4.5□□□□□ -1.69
SHMT1-211ENST00000618902 SLC35F2Q8IXU6 374 aa4.5□□□□□ -1.69
SHMT1-211ENST00000618902 TIGD4Q8IY51 512 aa4.5□□□□□ -1.69
SHMT1-211ENST00000618902 ZNF101Q8IZC7 436 aa4.5□□□□□ -1.69
SHMT1-211ENST00000618902 RFLNBQ8N5W9 214 aa4.5□□□□□ -1.69
SHMT1-211ENST00000618902 TEX29Q8N6K0 151 aa4.5□□□□□ -1.69
SHMT1-211ENST00000618902 SLC30A7Q8NEW0 376 aa4.5□□□□□ -1.69
SHMT1-211ENST00000618902 OR4M2Q8NGB6 313 aa4.5□□□□□ -1.69
SHMT1-211ENST00000618902 OR4M1Q8NGD0 313 aa4.5□□□□□ -1.69
SHMT1-211ENST00000618902 OR6K6Q8NGW6 343 aa4.5□□□□□ -1.69
SHMT1-211ENST00000618902 ZNF671Q8TAW3 534 aa4.5□□□□□ -1.69
SHMT1-211ENST00000618902 ST7LQ8TDW4 575 aa4.5□□□□□ -1.69
SHMT1-211ENST00000618902 SNAPC3Q92966 411 aa4.5□□□□□ -1.69
SHMT1-211ENST00000618902 YIPF5Q969M3 257 aa4.5□□□□□ -1.69
SHMT1-211ENST00000618902 PTX4Q96A99 478 aa4.5□□□□□ -1.69
SHMT1-211ENST00000618902 UPRTQ96BW1 309 aa4.5□□□□□ -1.69
SHMT1-211ENST00000618902 FOXRED1Q96CU9 486 aaPredicted RBP4.5□□□□□ -1.69
SHMT1-211ENST00000618902 HAVCR1Q96D42 359 aa4.5□□□□□ -1.69
SHMT1-211ENST00000618902 FYTTD1Q96QD9 318 aaKnown RBP4.5□□□□□ -1.69
SHMT1-211ENST00000618902 ABHD1Q96SE0 405 aa4.5□□□□□ -1.69
SHMT1-211ENST00000618902 DIRC2Q96SL1 478 aa4.5□□□□□ -1.69
SHMT1-211ENST00000618902 COMMD4Q9H0A8 199 aa4.5□□□□□ -1.69
SHMT1-211ENST00000618902 ISG20L2Q9H9L3 353 aaKnown RBP4.5□□□□□ -1.69
SHMT1-211ENST00000618902 TCF7L1Q9HCS4 588 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms